Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/fc/52cce1b835f32343b4865ee7f800b4/659_cAd-T1-TRNA-1_B23WHTKLT4_1.Aligned.sortedByCoord.out.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/3d/c77ddf2c81470bb10a95d68e9cf33d/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/3d/c77ddf2c81470bb10a95d68e9cf33d/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.csi: No such file or directory
ls: *.crai: No such file or directory