File Info

Filename
.command.log
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2f/869e9de463264915ffd27597146991/.command.log
Size
1.1 KB
Attempt
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e2/9715a317becfec1b350fad9a6c0121/659_bUW-T1-TRNA-1_B23WHTKLT4_1
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ce/f4a76b529fb56ba457250461b5529f/659_bUW-T1-TRNA-1_B23WHTKLT4_1.sample_qc.tsv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2f/869e9de463264915ffd27597146991/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2f/869e9de463264915ffd27597146991/.command.run
==> STAGING COMPLETE (4 inputs)

Processing Kallisto file: 659_bUW-T1-TRNA-1_B23WHTKLT4_1/abundance.h5
Successfully converted 659_bUW-T1-TRNA-1_B23WHTKLT4_1/abundance.h5 to 659_bUW-T1-TRNA-1_B23WHTKLT4_1_kallisto_mqc.tsv
  Sample: 659_bUW-T1-TRNA-1_B23WHTKLT4_1
  Mean Fragment Length: 159.0 bp
  Median Fragment Length: 142.0 bp
  pct_mito_est_counts: 0.007%
  pct_ribo_est_counts: 1.639%
  pct_hk_est_counts: 0.656%
  pct_male_est_counts: 0.0%
  pct_mito_tpm: 0.014%
  pct_ribo_tpm: 4.992%
  pct_hk_tpm: 0.996%
  pct_male_tpm: 0.0%
  score_log2tpm1_mean_chry_signature: 0.002%