File Info

Filename
fi_workdir/Log.final.out
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/90/b3d54387b4e32f72c44ffdd5bce281/fi_workdir/Log.final.out
Size
2.0 KB
Attempt
                                 Started job on |	Jun 08 10:20:37
                             Started mapping on |	Jun 08 10:27:09
                                    Finished on |	Jun 08 11:25:58
       Mapping speed, Million of reads per hour |	301.50

                          Number of input reads |	295550524
                      Average input read length |	270
                                    UNIQUE READS:
                   Uniquely mapped reads number |	283753701
                        Uniquely mapped reads % |	96.01%
                          Average mapped length |	269.86
                       Number of splices: Total |	329117899
            Number of splices: Annotated (sjdb) |	323534783
                       Number of splices: GT/AG |	325262524
                       Number of splices: GC/AG |	2386137
                       Number of splices: AT/AC |	282642
               Number of splices: Non-canonical |	1186596
                      Mismatch rate per base, % |	0.17%
                         Deletion rate per base |	0.01%
                        Deletion average length |	2.15
                        Insertion rate per base |	0.00%
                       Insertion average length |	1.82
                             MULTI-MAPPING READS:
        Number of reads mapped to multiple loci |	8636430
             % of reads mapped to multiple loci |	2.92%
        Number of reads mapped to too many loci |	587909
             % of reads mapped to too many loci |	0.20%
                                  UNMAPPED READS:
  Number of reads unmapped: too many mismatches |	0
       % of reads unmapped: too many mismatches |	0.00%
            Number of reads unmapped: too short |	2232915
                 % of reads unmapped: too short |	0.76%
                Number of reads unmapped: other |	339569
                     % of reads unmapped: other |	0.11%
                                  CHIMERIC READS:
                       Number of chimeric reads |	0
                            % of chimeric reads |	0.00%