Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5e/7170310decca823397ce3dc6065915/.command.sh Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b8/b50c1376fbf64279c52fa5ce5a882c/tih_rna_sample_00473_B23WHTKLT4_2.star_alignment.Aligned.sortedByCoord.out.cram Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5e/7170310decca823397ce3dc6065915/.command.run ==> STAGING COMPLETE (3 inputs) ls: *.bai: No such file or directory ls: *.csi: No such file or directory