Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/starfusion/ctat_genome_lib_build_dir/ref_genome.fa
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/8d/92d3f066af5660ddd2d30abd084076/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/8d/92d3f066af5660ddd2d30abd084076/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d6/16f980c69c901b250524b9ca143dc7/tih_rna_sample_00121_B23WHTKLT4_2.Aligned.sortedByCoord.out.bam.bai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/62/8bf89d264e39e6ca037fc5f7f8524d/tih_rna_sample_00121_B23WHTKLT4_2.Aligned.sortedByCoord.out.bam
==> STAGING COMPLETE (5 inputs)

ls: *.sam: No such file or directory
ls: *.csi: No such file or directory
ls: *.crai: No such file or directory