AIH curated blacklist: matched 7 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 55
Pass (FILTER=PASS): 2 (3.6%)
Fail (FILTER=FAIL): 53 (96.4%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 7
All 7 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 8
confidence_below_min(medium<high): 7
confidence_below_min(low<high): 6
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 3
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 3
confidence_below_min(medium<high);aih_curated_blacklist: 3
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 3
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 3
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 2
confidence_below_min(medium<high);total_reads_below_min(6.0<8.0): 2
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 2
confidence_below_min(low<high);total_reads_below_min(6.0<8.0): 2
confidence_below_min(low<high);total_reads_below_min(4.0<8.0);aih_curated_blacklist: 2
total_reads_below_min(4.0<8.0);aih_curated_blacklist: 1
confidence_below_min(medium<high);total_reads_below_min(7.0<8.0): 1
Breakdown by confidence:
high: 2 pass, 1 fail (total: 3)
low: 0 pass, 33 fail (total: 33)
medium: 0 pass, 19 fail (total: 19)
Arriba filter: 55 rows -> 2 PASS; wrote tih_rna_sample_00158_B23WHTKLT4_2.arriba.fusions.filtered.tsv and tih_rna_sample_00158_B23WHTKLT4_2.arriba.fusions.filtered_pass_only.tsv
Summary written to: tih_rna_sample_00158_B23WHTKLT4_2.arriba.fusions.filter_summary.txt