Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/21/f809ea099c32bab5631de0268dbb88/659_cWx-T1-TRNA-1_B23WHTKLT4_1_1.fastp.fastq.gz Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/starfusion/ctat_genome_lib_build_dir Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e1/d0852d6d92d69f53b407d9d14ab304/.command.sh Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e1/d0852d6d92d69f53b407d9d14ab304/.command.run Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/76/6126c068d987f701147f9c92c26fa4/659_cWx-T1-TRNA-1_B23WHTKLT4_1.Chimeric.out.junction Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/21/f809ea099c32bab5631de0268dbb88/659_cWx-T1-TRNA-1_B23WHTKLT4_1_2.fastp.fastq.gz ==> STAGING COMPLETE (6 inputs) -ctat genome lib [/tmp/nxf.509zlXEi2u/ctat_genome_lib_build_dir] validates. CMD: mkdir -p /tmp/nxf.509zlXEi2u/./_starF_checkpoints CMD: mkdir -p /tmp/nxf.509zlXEi2u/./star-fusion.preliminary -sample contains 292881117 rnaseq fragments * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes --genome_lib_dir /tmp/nxf.509zlXEi2u/ctat_genome_lib_build_dir -J /tmp/nxf.509zlXEi2u/659_cWx-T1-TRNA-1_B23WHTKLT4_1.Chimeric.out.junction -O /tmp/nxf.509zlXEi2u/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4 -parsing fusion evidence: /tmp/nxf.509zlXEi2u/659_cWx-T1-TRNA-1_B23WHTKLT4_1.Chimeric.out.junction -building interval tree based on /tmp/nxf.509zlXEi2u/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.12 min). -mapping reads to genes [10000], rate=16666.67/min [20000], rate=18750.00/min [30000], rate=16666.67/min [40000], rate=17142.86/min [50000], rate=17142.86/min [60000], rate=17307.69/min [70000], rate=18834.08/min [80000], rate=20869.57/min [90000], rate=21428.57/min [100000], rate=22471.91/min [110000], rate=23157.89/min [120000], rate=23529.41/min [130000], rate=24451.41/min [140000], rate=25609.76/min [150000], rate=25568.18/min [160000], rate=26016.26/min [170000], rate=26912.93/min [180000], rate=27763.50/min [190000], rate=28571.43/min [200000], rate=29197.08/min [210000], rate=29787.23/min [220000], rate=29662.92/min [230000], rate=29487.18/min [240000], rate=29690.72/min [250000], rate=30425.96/min [260000], rate=31075.70/min [270000], rate=31764.71/min [280000], rate=31878.56/min [290000], rate=31238.78/min [300000], rate=30560.27/min [310000], rate=29903.54/min [320000], rate=29538.46/min [330000], rate=29333.33/min [340000], rate=29018.49/min [350000], rate=28767.12/min [360000], rate=28533.69/min [370000], rate=28352.49/min [380000], rate=28148.15/min [390000], rate=28023.95/min [400000], rate=28503.56/min [410000], rate=28975.27/min [420000], rate=29439.25/min [430000], rate=29861.11/min [440000], rate=30379.75/min [450000], rate=30857.14/min [460000], rate=31328.04/min [470000], rate=31756.76/min [480000], rate=32250.84/min [490000], rate=32594.24/min [500000], rate=32537.96/min [510000], rate=32657.42/min [520000], rate=32980.97/min [530000], rate=33438.49/min [540000], rate=33820.46/min [550000], rate=33434.65/min [560000], rate=33366.43/min [570000], rate=33398.44/min [580000], rate=33397.31/min [590000], rate=33427.76/min [600000], rate=33241.00/min [610000], rate=32246.70/min [620000], rate=31686.54/min [630000], rate=31526.27/min [640000], rate=31270.36/min [650000], rate=31075.70/min [660000], rate=30889.24/min [670000], rate=30687.02/min [680000], rate=30815.71/min [690000], rate=30941.70/min [700000], rate=31042.13/min [710000], rate=31185.94/min [720000], rate=31349.78/min [730000], rate=31510.79/min [740000], rate=31556.50/min [750000], rate=31690.14/min [760000], rate=31754.87/min [770000], rate=31884.06/min [780000], rate=32054.79/min [790000], rate=32222.98/min [800000], rate=32410.53/min [810000], rate=32551.91/min [820000], rate=32712.77/min [830000], rate=32849.60/min [840000], rate=33005.89/min [850000], rate=33159.95/min [860000], rate=33311.81/min [870000], rate=33483.00/min [880000], rate=33652.01/min [890000], rate=33861.76/min [900000], rate=34026.47/min [910000], rate=34210.53/min [920000], rate=34392.52/min [930000], rate=34572.49/min [940000], rate=34729.06/min [950000], rate=34926.47/min [960000], rate=35164.84/min [970000], rate=35379.94/min [980000], rate=35593.22/min [990000], rate=35804.70/min [1000000], rate=36014.41/min [1010000], rate=36244.02/min [1020000], rate=36471.99/min [1030000], rate=36698.34/min [1040000], rate=36923.08/min [1050000], rate=37146.23/min [1060000], rate=37367.80/min [1070000], rate=37587.82/min [1080000], rate=37740.24/min [1090000], rate=37869.14/min [1100000], rate=37996.55/min [1110000], rate=38166.19/min [1120000], rate=38334.28/min [1130000], rate=38479.00/min [1140000], rate=38644.07/min [1150000], rate=38807.65/min [1160000], rate=39013.45/min [1170000], rate=39174.11/min [1180000], rate=39355.20/min [1190000], rate=39534.88/min [1200000], rate=39713.18/min [1210000], rate=39890.11/min [1220000], rate=40065.68/min [1230000], rate=40261.87/min [1240000], rate=40456.77/min [1250000], rate=40650.41/min [1260000], rate=40842.79/min [1270000], rate=41033.93/min [1280000], rate=41201.72/min [1290000], rate=41368.25/min [1300000], rate=41555.67/min [1310000], rate=41764.08/min [1320000], rate=42038.22/min [1330000], rate=42199.89/min [1340000], rate=42494.71/min [1350000], rate=42721.52/min [1360000], rate=42924.78/min [1370000], rate=43126.97/min [1380000], rate=43350.79/min [1390000], rate=43505.48/min [1400000], rate=43681.75/min [1410000], rate=43902.44/min [1420000], rate=44099.38/min [1430000], rate=44386.96/min [1440000], rate=44605.06/min [1450000], rate=44776.12/min [1460000], rate=44992.30/min [1470000], rate=45277.21/min [1480000], rate=45445.24/min [1490000], rate=45728.90/min [1500000], rate=45941.81/min [1510000], rate=46130.35/min [1520000], rate=46317.93/min [1530000], rate=46598.98/min [1540000], rate=46879.76/min [1550000], rate=47184.17/min [1560000], rate=47464.50/min [1570000], rate=47623.86/min [1580000], rate=47782.26/min [1590000], rate=47939.70/min [1600000], rate=48144.43/min [1610000], rate=48275.86/min [1620000], rate=48478.80/min [1630000], rate=48778.05/min [1640000], rate=49003.98/min [1650000], rate=49155.91/min [1660000], rate=49355.80/min [1670000], rate=49530.40/min [1680000], rate=49704.14/min [1690000], rate=49828.01/min [1700000], rate=49951.03/min [1710000], rate=50097.66/min [1720000], rate=50218.98/min [1730000], rate=50339.48/min [1740000], rate=50507.98/min [1750000], rate=50626.81/min [1760000], rate=50842.56/min [1770000], rate=51008.65/min [1780000], rate=51173.93/min [1790000], rate=51313.90/min [1800000], rate=51404.09/min [1810000], rate=51469.19/min [1820000], rate=51509.43/min [1830000], rate=51573.51/min [1840000], rate=51661.21/min [1850000], rate=51796.55/min [1860000], rate=51882.85/min [1870000], rate=51944.44/min [1880000], rate=52029.52/min [1890000], rate=52090.03/min [1900000], rate=52221.71/min [1910000], rate=52328.77/min [1920000], rate=52339.85/min [1930000], rate=52303.52/min [1940000], rate=52408.82/min [1950000], rate=52537.05/min [1960000], rate=52641.00/min [1970000], rate=52744.31/min [1980000], rate=52870.49/min [1990000], rate=52996.01/min [2000000], rate=53097.35/min [2010000], rate=53221.54/min [2020000], rate=53321.60/min [2030000], rate=53444.49/min [2040000], rate=53543.31/min [2050000], rate=53664.92/min [2060000], rate=53785.90/min [2070000], rate=53882.86/min [2080000], rate=53932.58/min [2090000], rate=53498.29/min [2100000], rate=52565.71/min [2110000], rate=52206.19/min [2120000], rate=51939.57/min [2130000], rate=51678.12/min [2140000], rate=51053.68/min [2150000], rate=50847.46/min [2160000], rate=50863.42/min [2170000], rate=50641.77/min [2180000], rate=50501.93/min [2190000], rate=50306.28/min [2200000], rate=50113.90/min [2210000], rate=49887.13/min [2220000], rate=49645.92/min [2230000], rate=49463.96/min [2240000], rate=49230.77/min [2250000], rate=48966.27/min [2260000], rate=48917.75/min [2270000], rate=48764.77/min [2280000], rate=48648.65/min [2290000], rate=48585.57/min [2300000], rate=48557.35/min [2310000], rate=48563.42/min [2320000], rate=48569.43/min [2330000], rate=48575.40/min [2340000], rate=48598.13/min [2350000], rate=48620.69/min [2360000], rate=48659.79/min [2370000], rate=48698.63/min [2380000], rate=48753.84/min [2390000], rate=48808.71/min [2400000], rate=48879.84/min [2410000], rate=48950.58/min [2420000], rate=49037.49/min [2430000], rate=49140.55/min [2440000], rate=49243.19/min [2450000], rate=49345.42/min [2460000], rate=49496.98/min [2470000], rate=49648.24/min [2480000], rate=49815.87/min [2490000], rate=49933.16/min [2500000], rate=50033.36/min [2510000], rate=49950.25/min [2520000], rate=49851.63/min [2530000], rate=49705.30/min [2540000], rate=49593.23/min [2550000], rate=49546.63/min [2560000], rate=49452.67/min [2570000], rate=49407.24/min [2580000], rate=49377.99/min [2590000], rate=49349.00/min [2600000], rate=49335.86/min -building interval tree based on /tmp/nxf.509zlXEi2u/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.12 min). -mapping reads to genes [10000], rate=37500.00/min [20000], rate=42857.14/min [30000], rate=41860.47/min [40000], rate=40677.97/min [50000], rate=34883.72/min [60000], rate=33333.33/min [70000], rate=35000.00/min [80000], rate=36090.23/min [90000], rate=38297.87/min [100000], rate=38461.54/min [110000], rate=38372.09/min [120000], rate=36548.22/min [130000], rate=30830.04/min [140000], rate=28378.38/min [150000], rate=27439.02/min [160000], rate=26966.29/min [170000], rate=27419.35/min [180000], rate=26799.01/min [190000], rate=26267.28/min [200000], rate=25531.91/min [210000], rate=25454.55/min [220000], rate=25142.86/min [230000], rate=24909.75/min [240000], rate=24742.27/min [250000], rate=24590.16/min [260000], rate=23926.38/min [270000], rate=23823.53/min [280000], rate=23661.97/min [290000], rate=23513.51/min [300000], rate=23255.81/min [310000], rate=23192.02/min [320000], rate=23104.69/min [330000], rate=22916.67/min [340000], rate=22793.30/min [350000], rate=22826.09/min [360000], rate=22784.81/min [370000], rate=22886.60/min [380000], rate=23053.59/min [390000], rate=23054.19/min [400000], rate=23054.76/min [410000], rate=23055.30/min [420000], rate=23119.27/min [430000], rate=23097.58/min [440000], rate=23198.59/min [450000], rate=23215.82/min [460000], rate=23291.14/min [470000], rate=22815.53/min [480000], rate=22695.04/min [490000], rate=22879.38/min [500000], rate=23112.48/min [510000], rate=23323.17/min [520000], rate=23564.95/min [530000], rate=23820.22/min [540000], rate=24089.22/min [550000], rate=24282.56/min [560000], rate=24471.96/min [570000], rate=24622.03/min [580000], rate=24803.99/min [590000], rate=25035.36/min [600000], rate=25263.16/min [610000], rate=25505.23/min [620000], rate=25743.94/min [630000], rate=25872.69/min [640000], rate=26016.26/min [650000], rate=26156.94/min [660000], rate=26312.29/min [670000], rate=26464.78/min [680000], rate=26597.13/min [690000], rate=26744.19/min [700000], rate=26888.60/min [710000], rate=27047.62/min [720000], rate=27221.17/min [730000], rate=27392.12/min [740000], rate=27526.35/min [750000], rate=27675.28/min [760000], rate=27855.83/min [770000], rate=27932.29/min [780000], rate=27857.14/min [790000], rate=27686.92/min [800000], rate=27809.97/min [810000], rate=28092.49/min [820000], rate=28308.40/min [830000], rate=28538.68/min [840000], rate=28767.12/min [850000], rate=28993.75/min [860000], rate=29218.57/min [870000], rate=29474.87/min [880000], rate=29713.00/min [890000], rate=29832.40/min [900000], rate=29331.88/min [910000], rate=29213.48/min [920000], rate=29144.67/min [930000], rate=29107.98/min [940000], rate=29042.22/min [950000], rate=28948.70/min [960000], rate=28930.19/min [970000], rate=28984.06/min [980000], rate=28979.79/min [990000], rate=29046.45/min [1000000], rate=29097.96/min [1010000], rate=29106.63/min [1020000], rate=29142.86/min [1030000], rate=29247.52/min [1040000], rate=29364.71/min [1050000], rate=29494.38/min [1060000], rate=29595.16/min [1070000], rate=29639.89/min [1080000], rate=29752.07/min [1090000], rate=29863.01/min [1100000], rate=30013.64/min [1110000], rate=30122.12/min [1120000], rate=30094.04/min [1130000], rate=30173.56/min [1140000], rate=30265.49/min [1150000], rate=30369.72/min [1160000], rate=30499.56/min [1170000], rate=30588.24/min [1180000], rate=30622.84/min [1190000], rate=30815.71/min [1200000], rate=30994.40/min [1210000], rate=31172.18/min [1220000], rate=31335.62/min [1230000], rate=31511.53/min [1240000], rate=31485.40/min [1250000], rate=31632.22/min [1260000], rate=31778.06/min [1270000], rate=31896.19/min [1280000], rate=32040.05/min [1290000], rate=32169.58/min [1300000], rate=32338.31/min [1310000], rate=32506.20/min [1320000], rate=32659.79/min [1330000], rate=32853.03/min [1340000], rate=33045.62/min [1350000], rate=33196.72/min [1360000], rate=33360.59/min [1370000], rate=33509.99/min [1380000], rate=33672.22/min [1390000], rate=33778.86/min [1400000], rate=33775.63/min [1410000], rate=33799.44/min [1420000], rate=33809.52/min [1430000], rate=33792.83/min [1440000], rate=33789.60/min [1450000], rate=33799.53/min [1460000], rate=33887.81/min [1470000], rate=33936.13/min [1480000], rate=33996.94/min [1490000], rate=34044.17/min [1500000], rate=34129.69/min [1510000], rate=34214.50/min [1520000], rate=34311.51/min [1530000], rate=34407.80/min [1540000], rate=34529.15/min [1550000], rate=34649.78/min [1560000], rate=34782.61/min [1570000], rate=34901.82/min [1580000], rate=35046.21/min [1590000], rate=35176.99/min [1600000], rate=35320.09/min [1610000], rate=35371.66/min [1620000], rate=35487.40/min [1630000], rate=35628.42/min [1640000], rate=35833.94/min [1650000], rate=36000.00/min [1660000], rate=36152.45/min [1670000], rate=36317.51/min [1680000], rate=36482.08/min [1690000], rate=36659.44/min [1700000], rate=36849.71/min [1710000], rate=36999.64/min [1720000], rate=37149.03/min [1730000], rate=37311.29/min [1740000], rate=37473.08/min [1750000], rate=37634.41/min [1760000], rate=37822.35/min [1770000], rate=37996.42/min [1780000], rate=38129.24/min [1790000], rate=38275.12/min [1800000], rate=38434.16/min [1810000], rate=38592.75/min [1820000], rate=38778.41/min [1830000], rate=38963.80/min [1840000], rate=39107.33/min [1850000], rate=39236.48/min [1860000], rate=39406.78/min [1870000], rate=39548.82/min [1880000], rate=39732.30/min [1890000], rate=39929.58/min [1900000], rate=40070.30/min [1910000], rate=40210.53/min [1920000], rate=40364.40/min [1930000], rate=40503.67/min [1940000], rate=40656.65/min [1950000], rate=40794.98/min [1960000], rate=40918.58/min [1970000], rate=41055.92/min [1980000], rate=41164.24/min [1990000], rate=41286.31/min [2000000], rate=41407.87/min [2010000], rate=41514.63/min [2020000], rate=41635.18/min [2030000], rate=41655.27/min [2040000], rate=41660.99/min [2050000], rate=41666.67/min [2060000], rate=41686.34/min [2070000], rate=41677.85/min [2080000], rate=41683.37/min [2090000], rate=41744.34/min [2100000], rate=41791.04/min [2110000], rate=41727.09/min [2120000], rate=41527.91/min [2130000], rate=41252.42/min [2140000], rate=41272.90/min [2150000], rate=41346.15/min [2160000], rate=41418.98/min [2170000], rate=41504.62/min [2180000], rate=41589.83/min [2190000], rate=41687.82/min [2200000], rate=41772.15/min [2210000], rate=41869.28/min [2220000], rate=41965.97/min [2230000], rate=42062.24/min [2240000], rate=42171.32/min [2250000], rate=42333.02/min [2260000], rate=42454.60/min [2270000], rate=42549.20/min [2280000], rate=42643.39/min [2290000], rate=42750.47/min [2300000], rate=42857.14/min [2310000], rate=42963.42/min [2320000], rate=43055.99/min [2330000], rate=43161.47/min [2340000], rate=43266.56/min [2350000], rate=43371.27/min [2360000], rate=43462.25/min [2370000], rate=43486.24/min [2380000], rate=43510.05/min [2390000], rate=43533.70/min [2400000], rate=43596.73/min [2410000], rate=43659.42/min [2420000], rate=43695.46/min [2430000], rate=43744.37/min [2440000], rate=43779.90/min [2450000], rate=43841.34/min [2460000], rate=43915.50/min [2470000], rate=43976.26/min [2480000], rate=44036.70/min [2490000], rate=44109.83/min [2500000], rate=44195.64/min [2510000], rate=44281.09/min [2520000], rate=44366.20/min [2530000], rate=44490.04/min [2540000], rate=44626.65/min [2550000], rate=44723.76/min [2560000], rate=44833.63/min [2570000], rate=44930.07/min [2580000], rate=45026.18/min [2590000], rate=45121.95/min -building interval tree based on /tmp/nxf.509zlXEi2u/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.10 min). -mapping reads to genes [10000], rate=20000.00/min [20000], rate=27272.73/min [30000], rate=32727.27/min [40000], rate=33333.33/min [50000], rate=37500.00/min [60000], rate=37500.00/min [70000], rate=34146.34/min [80000], rate=33802.82/min [90000], rate=33540.37/min [100000], rate=35087.72/min [110000], rate=36263.74/min [120000], rate=37500.00/min [130000], rate=38235.29/min [140000], rate=39436.62/min [150000], rate=40358.74/min [160000], rate=40506.33/min [170000], rate=41129.03/min [180000], rate=42687.75/min [190000], rate=45059.29/min [200000], rate=47430.83/min [210000], rate=49802.37/min [220000], rate=51361.87/min [230000], rate=52873.56/min [240000], rate=54545.45/min [250000], rate=55350.55/min [260000], rate=56521.74/min [270000], rate=58695.65/min [280000], rate=60215.05/min [290000], rate=61484.10/min [300000], rate=62283.74/min [310000], rate=63050.85/min [320000], rate=64646.46/min [330000], rate=65780.73/min [340000], rate=66885.25/min [350000], rate=67524.12/min [360000], rate=67289.72/min [370000], rate=64723.03/min [380000], rate=59842.52/min [390000], rate=58500.00/min [400000], rate=57416.27/min [410000], rate=56292.91/min [420000], rate=56000.00/min [430000], rate=54661.02/min [440000], rate=53012.05/min [450000], rate=53045.19/min [460000], rate=53076.92/min [470000], rate=51553.93/min [480000], rate=51891.89/min [490000], rate=52220.25/min [500000], rate=52539.40/min [510000], rate=52941.18/min [520000], rate=53333.33/min [530000], rate=53625.63/min [540000], rate=54000.00/min [550000], rate=54545.45/min [560000], rate=55081.97/min [570000], rate=55429.50/min [580000], rate=55858.75/min [590000], rate=55660.38/min [600000], rate=53491.83/min [610000], rate=52136.75/min [620000], rate=51381.22/min [630000], rate=48152.87/min [640000], rate=47880.30/min [650000], rate=47619.05/min [660000], rate=47368.42/min [670000], rate=47183.10/min [680000], rate=47058.82/min [690000], rate=47098.98/min [700000], rate=45701.85/min [710000], rate=45174.97/min [720000], rate=45046.92/min [730000], rate=44197.78/min [740000], rate=44047.62/min [750000], rate=44031.31/min [760000], rate=43100.19/min [770000], rate=43137.25/min [780000], rate=43213.30/min [790000], rate=43248.18/min [800000], rate=43360.43/min [810000], rate=43431.64/min [820000], rate=43501.33/min [830000], rate=43607.71/min [840000], rate=43712.06/min [850000], rate=43776.82/min [860000], rate=43914.89/min [870000], rate=43976.41/min [880000], rate=44110.28/min [890000], rate=44168.73/min [900000], rate=44226.04/min [910000], rate=44390.24/min [920000], rate=44552.06/min [930000], rate=44604.32/min [940000], rate=44797.46/min [950000], rate=44846.58/min [960000], rate=44859.81/min [970000], rate=44942.08/min [980000], rate=45057.47/min [990000], rate=45239.91/min [1000000], rate=45317.22/min [1010000], rate=45393.26/min [1020000], rate=45501.86/min [1030000], rate=45608.86/min [1040000], rate=45714.29/min [1050000], rate=45751.63/min [1060000], rate=45854.36/min [1070000], rate=45955.62/min [1080000], rate=46088.19/min [1090000], rate=46186.44/min [1100000], rate=46315.79/min [1110000], rate=46443.51/min [1120000], rate=46601.94/min [1130000], rate=46758.62/min [1140000], rate=46945.78/min [1150000], rate=47131.15/min [1160000], rate=47346.94/min [1170000], rate=47528.77/min [1180000], rate=47612.64/min [1190000], rate=47191.01/min [1200000], rate=46722.91/min [1210000], rate=46330.57/min [1220000], rate=45750.00/min [1230000], rate=45415.38/min [1240000], rate=44927.54/min [1250000], rate=44696.07/min [1260000], rate=44081.63/min [1270000], rate=43717.73/min [1280000], rate=43414.36/min [1290000], rate=42480.79/min [1300000], rate=41248.02/min [1310000], rate=40000.00/min [1320000], rate=39659.49/min [1330000], rate=39426.88/min [1340000], rate=39219.51/min [1350000], rate=39017.34/min [1360000], rate=38857.14/min [1370000], rate=38179.28/min [1380000], rate=37551.02/min [1390000], rate=37315.44/min [1400000], rate=37250.55/min [1410000], rate=37203.17/min [1420000], rate=37172.77/min [1430000], rate=37126.78/min [1440000], rate=37113.40/min [1450000], rate=37116.04/min [1460000], rate=37134.38/min [1470000], rate=37168.14/min [1480000], rate=37170.36/min [1490000], rate=37188.02/min [1500000], rate=37220.84/min [1510000], rate=37268.61/min [1520000], rate=37270.13/min [1530000], rate=37271.62/min [1540000], rate=37318.26/min [1550000], rate=37349.40/min [1560000], rate=37425.03/min [1570000], rate=37500.00/min [1580000], rate=37574.32/min [1590000], rate=37633.14/min [1600000], rate=37706.21/min [1610000], rate=37793.43/min [1620000], rate=37703.65/min [1630000], rate=37644.34/min [1640000], rate=37759.02/min [1650000], rate=37844.04/min [1660000], rate=37913.97/min [1670000], rate=38026.57/min [1680000], rate=38109.64/min [1690000], rate=38177.71/min [1700000], rate=38245.22/min [1710000], rate=38255.03/min [1720000], rate=38321.57/min [1730000], rate=38415.99/min [1740000], rate=38481.39/min [1750000], rate=38532.11/min [1760000], rate=38582.39/min [1770000], rate=38660.36/min [1780000], rate=38681.64/min [1790000], rate=38744.59/min [1800000], rate=38793.10/min [1810000], rate=38841.20/min [1820000], rate=38930.48/min [1830000], rate=38991.48/min [1840000], rate=39052.00/min [1850000], rate=38906.41/min [1860000], rate=38669.44/min [1870000], rate=38450.99/min [1880000], rate=38146.77/min [1890000], rate=38130.46/min [1900000], rate=38165.38/min [1910000], rate=38073.09/min [1920000], rate=38158.33/min [1930000], rate=38205.21/min [1940000], rate=38226.60/min [1950000], rate=38285.34/min [1960000], rate=38356.16/min [1970000], rate=38451.53/min [1980000], rate=38521.40/min [1990000], rate=38603.30/min [2000000], rate=38697.19/min [2010000], rate=38803.09/min [2020000], rate=38896.02/min [2030000], rate=38988.48/min [2040000], rate=39092.94/min [2050000], rate=39184.45/min [2060000], rate=39287.98/min [2070000], rate=39391.06/min [2080000], rate=39506.17/min [2090000], rate=39620.85/min [2100000], rate=39735.10/min [2110000], rate=39836.38/min [2120000], rate=39949.75/min [2130000], rate=40050.14/min [2140000], rate=40162.65/min [2150000], rate=40274.74/min [2160000], rate=40386.41/min [2170000], rate=40497.67/min [2180000], rate=40558.14/min [2190000], rate=40643.37/min [2200000], rate=40791.10/min [2210000], rate=40888.07/min [2220000], rate=40972.01/min [2230000], rate=41068.14/min [2240000], rate=41151.26/min [2250000], rate=41259.17/min [2260000], rate=41366.69/min [2270000], rate=41473.81/min [2280000], rate=41316.82/min [2290000], rate=41088.52/min [2300000], rate=40913.13/min [2310000], rate=40740.74/min [2320000], rate=40618.62/min [2330000], rate=40486.53/min [2340000], rate=40391.25/min [2350000], rate=40297.23/min [2360000], rate=40193.02/min [2370000], rate=40067.62/min [2380000], rate=40000.00/min [2390000], rate=39933.17/min [2400000], rate=39878.15/min [2410000], rate=39823.74/min [2420000], rate=39780.82/min [2430000], rate=39738.35/min [2440000], rate=39739.41/min [2450000], rate=39718.99/min [2460000], rate=39709.44/min [2470000], rate=39710.61/min [2480000], rate=39743.59/min [2490000], rate=39734.04/min [2500000], rate=39766.70/min [2510000], rate=39778.13/min [2520000], rate=39799.95/min [2530000], rate=39811.17/min [2540000], rate=39822.32/min [2550000], rate=39854.13/min [2560000], rate=39875.39/min [2570000], rate=39906.83/min [2580000], rate=39927.78/min -building interval tree based on /tmp/nxf.509zlXEi2u/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.10 min). -mapping reads to genes [10000], rate=40000.00/min [20000], rate=44444.44/min [30000], rate=56250.00/min [40000], rate=58536.59/min [50000], rate=66666.67/min [60000], rate=75000.00/min [70000], rate=85714.29/min [80000], rate=84210.53/min [90000], rate=79411.76/min [100000], rate=86956.52/min [110000], rate=94285.71/min [120000], rate=102857.14/min [130000], rate=105405.41/min [140000], rate=96551.72/min [150000], rate=95744.68/min [160000], rate=95049.50/min [170000], rate=94444.44/min [180000], rate=95575.22/min [190000], rate=99130.43/min [200000], rate=103448.28/min [210000], rate=105882.35/min [220000], rate=107317.07/min [230000], rate=111290.32/min [240000], rate=115200.00/min [250000], rate=120000.00/min [260000], rate=123809.52/min [270000], rate=120000.00/min [280000], rate=119148.94/min [290000], rate=117567.57/min [300000], rate=120000.00/min [310000], rate=118471.34/min [320000], rate=119254.66/min [330000], rate=122981.37/min [340000], rate=120710.06/min [350000], rate=120000.00/min [360000], rate=122727.27/min [370000], rate=120652.17/min [380000], rate=120634.92/min [390000], rate=117587.94/min [400000], rate=117073.17/min [410000], rate=113364.06/min [420000], rate=113004.48/min [430000], rate=115695.07/min [440000], rate=113793.10/min [450000], rate=111570.25/min [460000], rate=113114.75/min [470000], rate=95593.22/min [480000], rate=74418.60/min [490000], rate=60743.80/min [500000], rate=53475.94/min [510000], rate=49594.81/min [520000], rate=46706.59/min [530000], rate=42741.94/min [540000], rate=40652.45/min [550000], rate=36954.09/min [560000], rate=34181.08/min [570000], rate=33333.33/min [580000], rate=31693.99/min [590000], rate=31244.48/min [600000], rate=30050.08/min [610000], rate=28132.21/min [620000], rate=27352.94/min [630000], rate=26526.32/min [640000], rate=25329.82/min [650000], rate=24872.45/min [660000], rate=24719.10/min [670000], rate=24542.12/min [680000], rate=24014.13/min [690000], rate=23806.79/min [700000], rate=23635.34/min [710000], rate=23548.92/min [720000], rate=23300.97/min [730000], rate=23186.87/min [740000], rate=23076.92/min [750000], rate=22924.10/min [760000], rate=22834.25/min [770000], rate=22792.30/min [780000], rate=22328.24/min [790000], rate=22159.89/min [800000], rate=22079.12/min [810000], rate=22141.23/min [820000], rate=22192.15/min [830000], rate=22261.96/min [840000], rate=22310.76/min [850000], rate=22358.61/min [860000], rate=22270.18/min [870000], rate=22298.16/min [880000], rate=22391.86/min [890000], rate=22512.65/min [900000], rate=22613.07/min [910000], rate=22721.60/min [920000], rate=22828.78/min [930000], rate=22897.00/min [940000], rate=22982.89/min [950000], rate=23067.58/min [960000], rate=23132.53/min [970000], rate=23205.74/min [980000], rate=23296.35/min [990000], rate=23358.24/min [1000000], rate=23373.59/min [1010000], rate=23236.20/min [1020000], rate=23243.45/min [1030000], rate=23338.37/min [1040000], rate=23441.02/min [1050000], rate=23481.18/min [1060000], rate=23373.76/min [1070000], rate=23456.34/min [1080000], rate=23572.21/min [1090000], rate=23704.24/min [1100000], rate=23835.32/min [1110000], rate=23965.46/min [1120000], rate=24077.39/min [1130000], rate=24222.94/min [1140000], rate=24358.97/min [1150000], rate=24502.84/min [1160000], rate=24645.89/min [1170000], rate=24796.89/min [1180000], rate=24947.15/min [1190000], rate=25096.66/min [1200000], rate=25245.44/min [1210000], rate=25402.38/min [1220000], rate=25549.74/min [1230000], rate=25714.29/min [1240000], rate=25788.56/min [1250000], rate=25853.15/min [1260000], rate=25934.82/min [1270000], rate=26024.59/min [1280000], rate=26113.57/min [1290000], rate=26219.51/min [1300000], rate=26342.45/min [1310000], rate=26464.65/min [1320000], rate=26577.18/min [1330000], rate=26600.00/min [1340000], rate=26552.18/min [1350000], rate=26671.06/min [1360000], rate=26780.44/min [1370000], rate=26915.52/min [1380000], rate=27049.98/min [1390000], rate=27166.12/min [1400000], rate=27290.45/min [1410000], rate=27414.13/min [1420000], rate=27501.61/min [1430000], rate=27641.75/min [1440000], rate=27772.42/min [1450000], rate=27893.56/min [1460000], rate=28032.00/min [1470000], rate=28169.91/min [1480000], rate=28325.36/min [1490000], rate=28471.34/min [1500000], rate=28607.76/min [1510000], rate=28743.65/min [1520000], rate=28652.21/min [1530000], rate=28509.32/min [1540000], rate=28422.02/min [1550000], rate=28319.12/min [1560000], rate=28175.80/min [1570000], rate=28144.61/min [1580000], rate=28072.25/min [1590000], rate=28001.17/min [1600000], rate=27972.03/min [1610000], rate=27951.39/min [1620000], rate=27931.03/min [1630000], rate=27934.88/min [1640000], rate=27938.67/min [1650000], rate=27966.10/min [1660000], rate=28009.00/min [1670000], rate=28027.97/min [1680000], rate=28054.55/min [1690000], rate=28112.00/min [1700000], rate=28161.24/min [1710000], rate=28217.82/min [1720000], rate=28297.23/min [1730000], rate=28376.16/min [1740000], rate=28439.12/min [1750000], rate=28509.37/min [1760000], rate=28579.16/min [1770000], rate=28656.23/min [1780000], rate=28725.12/min [1790000], rate=28801.29/min [1800000], rate=28884.73/min [1810000], rate=28960.00/min [1820000], rate=29042.55/min [1830000], rate=29116.95/min [1840000], rate=29198.62/min [1850000], rate=29287.60/min [1860000], rate=29376.15/min [1870000], rate=29472.03/min [1880000], rate=29559.75/min [1890000], rate=29654.81/min [1900000], rate=29757.24/min [1910000], rate=29859.30/min [1920000], rate=29968.78/min [1930000], rate=30077.92/min [1940000], rate=30186.72/min [1950000], rate=30295.18/min [1960000], rate=30403.31/min [1970000], rate=30511.10/min [1980000], rate=30594.90/min [1990000], rate=30623.24/min [2000000], rate=30651.34/min [2010000], rate=30671.41/min [2020000], rate=30699.09/min [2030000], rate=30734.29/min [2040000], rate=30792.45/min [2050000], rate=30850.26/min [2060000], rate=30907.73/min [2070000], rate=30972.57/min [2080000], rate=31037.06/min [2090000], rate=31101.19/min [2100000], rate=31164.98/min [2110000], rate=31213.02/min [2120000], rate=31283.82/min [2130000], rate=31354.27/min [2140000], rate=31424.38/min [2150000], rate=31486.45/min [2160000], rate=31548.20/min [2170000], rate=31609.61/min [2180000], rate=31678.37/min [2190000], rate=31746.80/min [2200000], rate=31814.90/min [2210000], rate=31882.66/min [2220000], rate=31973.12/min [2230000], rate=32055.58/min [2240000], rate=32145.42/min [2250000], rate=32242.66/min [2260000], rate=32331.90/min [2270000], rate=32428.57/min [2280000], rate=32524.96/min [2290000], rate=32621.08/min [2300000], rate=32716.93/min [2310000], rate=32820.27/min [2320000], rate=32915.58/min [2330000], rate=33010.63/min [2340000], rate=33113.21/min [2350000], rate=33215.55/min [2360000], rate=33325.49/min [2370000], rate=33435.22/min [2380000], rate=33536.87/min [2390000], rate=33638.28/min [2400000], rate=33731.55/min [2410000], rate=33816.65/min [2420000], rate=33901.47/min [2430000], rate=33993.94/min [2440000], rate=34086.15/min [2450000], rate=34178.10/min [2460000], rate=34277.75/min [2470000], rate=34377.17/min [2480000], rate=34476.37/min [2490000], rate=34583.33/min [2500000], rate=34674.06/min [2510000], rate=34772.57/min [2520000], rate=34870.85/min [2530000], rate=34936.71/min [2540000], rate=34994.26/min [2550000], rate=35059.58/min [2560000], rate=35116.60/min [2570000], rate=35181.38/min [2580000], rate=35245.90/min [2590000], rate=35318.18/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads -J /tmp/nxf.509zlXEi2u/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --genome_lib_dir /tmp/nxf.509zlXEi2u/ctat_genome_lib_build_dir --filt_file /tmp/nxf.509zlXEi2u/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail -M 50 > /tmp/nxf.509zlXEi2u/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -parsing /tmp/nxf.509zlXEi2u/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info. 0.00 reads per min processed... 12000000.00 reads per min processed... 18000000.00 reads per min processed... 24000000.00 reads per min processed... 15000000.00 reads per min processed... 9000000.00 reads per min processed... 8400000.00 reads per min processed... 8000000.00 reads per min processed... 7714285.71 reads per min processed... 6666666.67 reads per min processed... 6600000.00 reads per min processed... 6545454.55 reads per min processed... 6500000.00 reads per min processed... 6461538.46 reads per min processed... 6000000.00 reads per min processed... 6000000.00 reads per min processed... 6000000.00 reads per min processed... 5684210.53 reads per min processed... 5700000.00 reads per min processed... 5714285.71 reads per min processed... 5727272.73 reads per min processed... 5739130.43 reads per min processed... 5520000.00 reads per min processed... 5333333.33 reads per min processed... 5357142.86 reads per min processed... 5200000.00 reads per min processed... 5225806.45 reads per min processed... 5250000.00 reads per min processed... 5117647.06 reads per min processed... 5142857.14 reads per min processed... 5166666.67 reads per min processed... 5052631.58 reads per min processed... 5076923.08 reads per min processed... 5100000.00 reads per min processed... 5121951.22 reads per min processed... 5142857.14 reads per min processed... 5162790.70 reads per min processed... 5066666.67 reads per min processed... 5086956.52 reads per min processed... 5106382.98 reads per min processed... 5125000.00 reads per min processed... 5142857.14 reads per min processed... 5160000.00 reads per min processed... 5176470.59 reads per min processed... 5192307.69 reads per min processed... 5111111.11 reads per min processed... 5127272.73 reads per min processed... 5142857.14 reads per min processed... 5157894.74 reads per min processed... 5172413.79 reads per min processed... 5186440.68 reads per min processed... 5200000.00 reads per min processed... 5213114.75 reads per min processed... 5311475.41 reads per min processed... 5409836.07 reads per min processed... 5419354.84 reads per min processed... 5343750.00 reads per min processed... 5353846.15 reads per min processed... 5363636.36 reads per min processed... 5373134.33 reads per min processed... 5382352.94 reads per min processed... 5314285.71 reads per min processed... 5323943.66 reads per min processed... 5333333.33 reads per min processed... 5342465.75 reads per min processed... 5351351.35 reads per min processed... 5360000.00 reads per min processed... 5298701.30 reads per min processed... 5307692.31 reads per min processed... 5316455.70 reads per min processed... 5325000.00 reads per min processed... 5268292.68 reads per min processed... 5277108.43 reads per min processed... 5285714.29 reads per min processed... 5294117.65 reads per min processed... 5302325.58 reads per min processed... 5250000.00 reads per min processed... 5258426.97 reads per min processed... 5266666.67 reads per min processed... 5274725.27 reads per min processed... 5282608.70 reads per min processed... 5290322.58 reads per min processed... 5242105.26 reads per min processed... done. * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict -J /tmp/nxf.509zlXEi2u/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -O /tmp/nxf.509zlXEi2u/./star-fusion.preliminary/star-fusion -parsing fusion evidence: /tmp/nxf.509zlXEi2u/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -outputting fusion candidates to file: /tmp/nxf.509zlXEi2u/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter --fusion_preds /tmp/nxf.509zlXEi2u/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary -J /tmp/nxf.509zlXEi2u/659_cWx-T1-TRNA-1_B23WHTKLT4_1.Chimeric.out.junction --tmpdir /tmp --min_junction_reads 0 --min_sum_frags 1 --require_LDAS 0 --max_promiscuity 10 --min_pct_dom_promiscuity 20 --min_novel_junction_support 1 --min_alt_pct_junction 10 --aggregate_novel_junction_dist 5 --min_spanning_frags_only 1 --genome_lib_dir /tmp/nxf.509zlXEi2u/ctat_genome_lib_build_dir --out_prefix /tmp/nxf.509zlXEi2u/./star-fusion.preliminary/star-fusion CMD: mkdir -p /tmp/nxf.509zlXEi2u/./star-fusion.preliminary/star-fusion.filter.intermediates_dir EM: Starting log likelihood: -220749.529801 EM: Round [1] log likelihood: -220608.599896 EM: Round [2] log likelihood: -220560.229175 EM: Round [3] log likelihood: -220538.066419 EM: Round [4] log likelihood: -220526.398926 EM: Round [5] log likelihood: -220519.749469 EM: Round [6] log likelihood: -220515.740641 EM: Round [7] log likelihood: -220513.206280 EM: Round [8] log likelihood: -220511.535291 EM: Round [9] log likelihood: -220510.392622 EM: Round [10] log likelihood: -220509.586867 EM: Round [11] log likelihood: -220509.004127 EM: Round [12] log likelihood: -220508.573879 EM: Round [13] log likelihood: -220508.250811 EM: Round [14] log likelihood: -220508.004822 EM: Round [15] log likelihood: -220507.815327 EM: Round [16] log likelihood: -220507.667897 EM: Round [17] log likelihood: -220507.552201 EM: Round [18] log likelihood: -220507.460715 EM: Round [19] log likelihood: -220507.387872 EM: Round [20] log likelihood: -220507.329505 EM: Round [21] log likelihood: -220507.282458 EM: Round [22] log likelihood: -220507.244323 EM: Round [23] log likelihood: -220507.213243 EM: Round [24] log likelihood: -220507.187780 EM: Round [25] log likelihood: -220507.166809 EM: Round [26] log likelihood: -220507.149451 EM: Round [27] log likelihood: -220507.135009 EM: Round [28] log likelihood: -220507.122932 EM: Round [29] log likelihood: -220507.112782 EM: Round [30] log likelihood: -220507.104208 EM: Round [31] log likelihood: -220507.096928 EM: Round [32] log likelihood: -220507.090716 EM: Round [33] log likelihood: -220507.085389 EM: Round [34] log likelihood: -220507.080797 EM: Round [35] log likelihood: -220507.076820 EM: Round [36] log likelihood: -220507.073357 EM: Round [37] log likelihood: -220507.070329 EM: Round [38] log likelihood: -220507.067669 EM: Round [39] log likelihood: -220507.065320 EM: Round [40] log likelihood: -220507.063238 EM: Round [41] log likelihood: -220507.061384 EM: Round [42] log likelihood: -220507.059726 EM: Round [43] log likelihood: -220507.058238 EM: Round [44] log likelihood: -220507.056897 EM: Round [45] log likelihood: -220507.055684 EM: Round [46] log likelihood: -220507.054583 EM: Round [47] log likelihood: -220507.053581 EM: Round [48] log likelihood: -220507.052666 EM: Round [49] log likelihood: -220507.051828 EM: Round [50] log likelihood: -220507.051058 EM: Round [51] log likelihood: -220507.050348 EM: Round [52] log likelihood: -220507.049693 EM: Round [53] log likelihood: -220507.049087 EM: Round [54] log likelihood: -220507.048524 EM: Round [55] log likelihood: -220507.048001 EM: Round [56] log likelihood: -220507.047513 EM: Round [57] log likelihood: -220507.047058 EM: Round [58] log likelihood: -220507.046633 EM: Round [59] log likelihood: -220507.046234 EM: Round [60] log likelihood: -220507.045860 EM: Round [61] log likelihood: -220507.045509 EM: Round [62] log likelihood: -220507.045178 EM: Round [63] log likelihood: -220507.044866 EM: Round [64] log likelihood: -220507.044572 EM: Round [65] log likelihood: -220507.044293 EM: Round [66] log likelihood: -220507.044030 EM: Round [67] log likelihood: -220507.043780 EM: Round [68] log likelihood: -220507.043544 EM: Round [69] log likelihood: -220507.043319 EM: Round [70] log likelihood: -220507.043105 EM: Round [71] log likelihood: -220507.042902 EM: Round [72] log likelihood: -220507.042708 EM: Round [73] log likelihood: -220507.042523 EM: Round [74] log likelihood: -220507.042347 EM: Round [75] log likelihood: -220507.042179 EM: Round [76] log likelihood: -220507.042018 EM: Round [77] log likelihood: -220507.041864 EM: Round [78] log likelihood: -220507.041717 EM: Round [79] log likelihood: -220507.041576 EM: Round [80] log likelihood: -220507.041440 EM: Round [81] log likelihood: -220507.041310 EM: Round [82] log likelihood: -220507.041186 EM: Round [83] log likelihood: -220507.041066 EM: Round [84] log likelihood: -220507.040951 EM: Round [85] log likelihood: -220507.040840 EM: Round [86] log likelihood: -220507.040733 EM: Round [87] log likelihood: -220507.040631 EM: Round [88] log likelihood: -220507.040532 EM: Stopping iterations at round 88 due to insufficient improvement in likelihood. EM: Starting log likelihood: -220451.248880 EM: Round [1] log likelihood: -220350.595500 EM: Round [2] log likelihood: -220316.470850 EM: Round [3] log likelihood: -220300.933324 EM: Round [4] log likelihood: -220292.798434 EM: Round [5] log likelihood: -220288.191540 EM: Round [6] log likelihood: -220285.432302 EM: Round [7] log likelihood: -220283.698452 EM: Round [8] log likelihood: -220282.561047 EM: Round [9] log likelihood: -220281.786313 EM: Round [10] log likelihood: -220281.241605 EM: Round [11] log likelihood: -220280.848535 EM: Round [12] log likelihood: -220280.558866 EM: Round [13] log likelihood: -220280.341763 EM: Round [14] log likelihood: -220280.176810 EM: Round [15] log likelihood: -220280.050075 EM: Round [16] log likelihood: -220279.951798 EM: Round [17] log likelihood: -220279.874992 EM: Round [18] log likelihood: -220279.814560 EM: Round [19] log likelihood: -220279.766729 EM: Round [20] log likelihood: -220279.728672 EM: Round [21] log likelihood: -220279.698244 EM: Round [22] log likelihood: -220279.673809 EM: Round [23] log likelihood: -220279.654104 EM: Round [24] log likelihood: -220279.638149 EM: Round [25] log likelihood: -220279.625181 EM: Round [26] log likelihood: -220279.614601 EM: Round [27] log likelihood: -220279.605937 EM: Round [28] log likelihood: -220279.598816 EM: Round [29] log likelihood: -220279.592939 EM: Round [30] log likelihood: -220279.588072 EM: Round [31] log likelihood: -220279.584025 EM: Round [32] log likelihood: -220279.580646 EM: Round [33] log likelihood: -220279.577813 EM: Round [34] log likelihood: -220279.575427 EM: Round [35] log likelihood: -220279.573409 EM: Round [36] log likelihood: -220279.571694 EM: Round [37] log likelihood: -220279.570229 EM: Round [38] log likelihood: -220279.568972 EM: Round [39] log likelihood: -220279.567888 EM: Round [40] log likelihood: -220279.566948 EM: Round [41] log likelihood: -220279.566128 EM: Round [42] log likelihood: -220279.565409 EM: Round [43] log likelihood: -220279.564775 EM: Round [44] log likelihood: -220279.564213 EM: Round [45] log likelihood: -220279.563712 EM: Round [46] log likelihood: -220279.563262 EM: Round [47] log likelihood: -220279.562857 EM: Round [48] log likelihood: -220279.562490 EM: Round [49] log likelihood: -220279.562155 EM: Round [50] log likelihood: -220279.561848 EM: Round [51] log likelihood: -220279.561566 EM: Round [52] log likelihood: -220279.561305 EM: Round [53] log likelihood: -220279.561062 EM: Round [54] log likelihood: -220279.560836 EM: Round [55] log likelihood: -220279.560624 EM: Round [56] log likelihood: -220279.560425 EM: Round [57] log likelihood: -220279.560238 EM: Round [58] log likelihood: -220279.560060 EM: Round [59] log likelihood: -220279.559892 EM: Round [60] log likelihood: -220279.559731 EM: Round [61] log likelihood: -220279.559579 EM: Round [62] log likelihood: -220279.559433 EM: Round [63] log likelihood: -220279.559293 EM: Round [64] log likelihood: -220279.559159 EM: Round [65] log likelihood: -220279.559030 EM: Round [66] log likelihood: -220279.558906 EM: Round [67] log likelihood: -220279.558786 EM: Round [68] log likelihood: -220279.558671 EM: Round [69] log likelihood: -220279.558560 EM: Round [70] log likelihood: -220279.558452 EM: Round [71] log likelihood: -220279.558347 EM: Round [72] log likelihood: -220279.558246 EM: Round [73] log likelihood: -220279.558148 EM: Stopping iterations at round 73 due to insufficient improvement in likelihood. CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.509zlXEi2u/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20 --fusion_preds /tmp/nxf.509zlXEi2u/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.509zlXEi2u/ctat_genome_lib_build_dir CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.509zlXEi2u/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.509zlXEi2u/ctat_genome_lib_build_dir CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.509zlXEi2u/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter --genome_lib_dir /tmp/nxf.509zlXEi2u/ctat_genome_lib_build_dir --max_promiscuity 10 --min_pct_dom_promiscuity 20 CMD: cp /tmp/nxf.509zlXEi2u/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.509zlXEi2u/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.509zlXEi2u/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.509zlXEi2u/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged CMD: ln -sf /tmp/nxf.509zlXEi2u/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.509zlXEi2u/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered * Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.509zlXEi2u/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 292881117 > /tmp/nxf.509zlXEi2u/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM * Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.509zlXEi2u/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.509zlXEi2u/ctat_genome_lib_build_dir > /tmp/nxf.509zlXEi2u/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo * Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.509zlXEi2u/ctat_genome_lib_build_dir --annotate /tmp/nxf.509zlXEi2u/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.509zlXEi2u/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot * Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.509zlXEi2u/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.509zlXEi2u/ctat_genome_lib_build_dir -done, see /tmp/nxf.509zlXEi2u/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass * Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.509zlXEi2u/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.509zlXEi2u/ctat_genome_lib_build_dir -filter_likely_RT_artifacts: (pass: 1965, filtered: 10005) * Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.509zlXEi2u/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001 * Running CMD: cp /tmp/nxf.509zlXEi2u/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv * Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv * Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.509zlXEi2u/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGL.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [IGL.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [IGL.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [ENSG00000278399.1] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGL.g@-ext] WARNING, no entry stored in dbm for [IGL.g@-ext] WARNING, no entry stored in dbm for [IGL-.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [ENSG00000246323.2] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [ENSG00000225851.1] WARNING, no entry stored in dbm for [IGL.g@-ext] WARNING, no entry stored in dbm for [IGL.g@-ext] WARNING, no entry stored in dbm for [ENSG00000236438.7] WARNING, no entry stored in dbm for [ENSG00000260126.2] WARNING, no entry stored in dbm for [ENSG00000234715.2] WARNING, no entry stored in dbm for [ENSG00000282458.1] WARNING, no entry stored in dbm for [ENSG00000226049.3] WARNING, no entry stored in dbm for [ENSG00000260404.3] WARNING, no entry stored in dbm for [IGL-.g@-ext] WARNING, no entry stored in dbm for [ENSG00000204622.11] WARNING, no entry stored in dbm for [ENSG00000235290.1] WARNING, no entry stored in dbm for [ENSG00000231259.5] WARNING, no entry stored in dbm for [ENSG00000180747.15] WARNING, no entry stored in dbm for [ENSG00000233930.4] WARNING, no entry stored in dbm for [ENSG00000286948.1] WARNING, no entry stored in dbm for [ENSG00000280136.2] WARNING, no entry stored in dbm for [ENSG00000259755.1] WARNING, no entry stored in dbm for [ENSG00000272848.2] WARNING, no entry stored in dbm for [ENSG00000128438.10] WARNING, no entry stored in dbm for [ENSG00000264538.6] WARNING, no entry stored in dbm for [ENSG00000200792.1] WARNING, no entry stored in dbm for [ENSG00000256195.3] WARNING, no entry stored in dbm for [ENSG00000237424.1] WARNING, no entry stored in dbm for [ENSG00000239268.3] WARNING, no entry stored in dbm for [ENSG00000254485.5] WARNING, no entry stored in dbm for [ENSG00000267698.1] WARNING, no entry stored in dbm for [ENSG00000146556.14] WARNING, no entry stored in dbm for [ENSG00000271581.1] WARNING, no entry stored in dbm for [ENSG00000146556.14] WARNING, no entry stored in dbm for [ENSG00000242294.6] WARNING, no entry stored in dbm for [ENSG00000237037.9] WARNING, no entry stored in dbm for [ENSG00000230116.1] WARNING, no entry stored in dbm for [ENSG00000223508.5] WARNING, no entry stored in dbm for [ENSG00000201428.1] WARNING, no entry stored in dbm for [ENSG00000200488.1] WARNING, no entry stored in dbm for [ENSG00000202538.1] WARNING, no entry stored in dbm for [ENSG00000200795.1] WARNING, no entry stored in dbm for [ENSG00000283240.1] WARNING, no entry stored in dbm for [ENSG00000229891.2] WARNING, no entry stored in dbm for [ENSG00000276758.1] WARNING, no entry stored in dbm for [ENSG00000231203.1] WARNING, no entry stored in dbm for [ENSG00000229320.3] WARNING, no entry stored in dbm for [ENSG00000237978.6] WARNING, no entry stored in dbm for [ENSG00000216817.1] WARNING, no entry stored in dbm for [ENSG00000253552.8] WARNING, no entry stored in dbm for [ENSG00000215483.11] WARNING, no entry stored in dbm for [ENSG00000268869.6] WARNING, no entry stored in dbm for [ENSG00000225988.1] WARNING, no entry stored in dbm for [ENSG00000271162.1] WARNING, no entry stored in dbm for [ENSG00000236991.6] WARNING, no entry stored in dbm for [ENSG00000230490.3] WARNING, no entry stored in dbm for [ENSG00000272734.1] WARNING, no entry stored in dbm for [ENSG00000224016.2] WARNING, no entry stored in dbm for [ENSG00000204650.14] WARNING, no entry stored in dbm for [ENSG00000258705.2] WARNING, no entry stored in dbm for [ENSG00000277089.4] WARNING, no entry stored in dbm for [ENSG00000283345.1] WARNING, no entry stored in dbm for [ENSG00000215302.8] WARNING, no entry stored in dbm for [ENSG00000249149.2] WARNING, no entry stored in dbm for [ENSG00000288604.1] WARNING, no entry stored in dbm for [ENSG00000283132.1] WARNING, no entry stored in dbm for [ENSG00000279516.2] WARNING, no entry stored in dbm for [ENSG00000215067.10] WARNING, no entry stored in dbm for [ENSG00000283132.1] WARNING, no entry stored in dbm for [ENSG00000279516.2] WARNING, no entry stored in dbm for [ENSG00000241350.1] WARNING, no entry stored in dbm for [ENSG00000237004.4] WARNING, no entry stored in dbm for [ENSG00000233782.1] WARNING, no entry stored in dbm for [ENSG00000268266.1] WARNING, no entry stored in dbm for [ENSG00000228303.1] WARNING, no entry stored in dbm for [ENSG00000259291.2] WARNING, no entry stored in dbm for [ENSG00000242779.7] WARNING, no entry stored in dbm for [ENSG00000197332.9] WARNING, no entry stored in dbm for [ENSG00000213801.4] WARNING, no entry stored in dbm for [ENSG00000219665.8] WARNING, no entry stored in dbm for [ENSG00000234420.7] WARNING, no entry stored in dbm for [ENSG00000260426.1] WARNING, no entry stored in dbm for [ENSG00000266502.1] WARNING, no entry stored in dbm for [ENSG00000228065.11] WARNING, no entry stored in dbm for [ENSG00000250802.7] WARNING, no entry stored in dbm for [ENSG00000227598.1] WARNING, no entry stored in dbm for [ENSG00000215790.8] WARNING, no entry stored in dbm for [ENSG00000185485.14] WARNING, no entry stored in dbm for [ENSG00000264112.1] WARNING, no entry stored in dbm for [ENSG00000282458.1] WARNING, no entry stored in dbm for [ENSG00000282458.1] WARNING, no entry stored in dbm for [ENSG00000185596.16] WARNING, no entry stored in dbm for [ENSG00000146556.14] WARNING, no entry stored in dbm for [ENSG00000146556.14] WARNING, no entry stored in dbm for [ENSG00000225292.2] WARNING, no entry stored in dbm for [ENSG00000225292.2] WARNING, no entry stored in dbm for [ENSG00000228999.4] WARNING, no entry stored in dbm for [ENSG00000238045.9] WARNING, no entry stored in dbm for [ENSG00000238057.10] WARNING, no entry stored in dbm for [ENSG00000244560.7] WARNING, no entry stored in dbm for [ENSG00000203987.3] WARNING, no entry stored in dbm for [ENSG00000259429.5] WARNING, no entry stored in dbm for [ENSG00000250979.1] WARNING, no entry stored in dbm for [ENSG00000225167.1] WARNING, no entry stored in dbm for [ENSG00000198054.12] WARNING, no entry stored in dbm for [ENSG00000225685.1] WARNING, no entry stored in dbm for [ENSG00000260289.2] WARNING, no entry stored in dbm for [ENSG00000167747.15] WARNING, no entry stored in dbm for [ENSG00000248734.2] WARNING, no entry stored in dbm for [ENSG00000250026.5] WARNING, no entry stored in dbm for [ENSG00000238164.6] WARNING, no entry stored in dbm for [ENSG00000189423.13] WARNING, no entry stored in dbm for [ENSG00000235888.3] WARNING, no entry stored in dbm for [ENSG00000287243.2] WARNING, no entry stored in dbm for [ENSG00000288035.1] WARNING, no entry stored in dbm for [ENSG00000235033.7] WARNING, no entry stored in dbm for [ENSG00000261499.2] WARNING, no entry stored in dbm for [ENSG00000238825.1] WARNING, no entry stored in dbm for [ENSG00000239023.1] WARNING, no entry stored in dbm for [ENSG00000239827.8] WARNING, no entry stored in dbm for [ENSG00000227113.2] WARNING, no entry stored in dbm for [ENSG00000280131.1] WARNING, no entry stored in dbm for [ENSG00000225391.5] WARNING, no entry stored in dbm for [ENSG00000237584.1] WARNING, no entry stored in dbm for [ENSG00000106610.15] WARNING, no entry stored in dbm for [ENSG00000198526.7] WARNING, no entry stored in dbm for [ENSG00000227097.5] WARNING, no entry stored in dbm for [ENSG00000250332.1] WARNING, no entry stored in dbm for [ENSG00000269893.8] WARNING, no entry stored in dbm for [ENSG00000203875.13] WARNING, no entry stored in dbm for [ENSG00000175061.18] WARNING, no entry stored in dbm for [ENSG00000232956.9] WARNING, no entry stored in dbm for [ENSG00000260630.7] WARNING, no entry stored in dbm for [ENSG00000248445.5] WARNING, no entry stored in dbm for [ENSG00000247157.7] WARNING, no entry stored in dbm for [ENSG00000180747.15] WARNING, no entry stored in dbm for [ENSG00000283426.1] WARNING, no entry stored in dbm for [ENSG00000244306.11] WARNING, no entry stored in dbm for [ENSG00000258186.2] WARNING, no entry stored in dbm for [ENSG00000215790.8] WARNING, no entry stored in dbm for [ENSG00000215790.8] WARNING, no entry stored in dbm for [ENSG00000215790.8] WARNING, no entry stored in dbm for [ENSG00000284607.1] WARNING, no entry stored in dbm for [ENSG00000240535.8] WARNING, no entry stored in dbm for [ENSG00000213332.4] WARNING, no entry stored in dbm for [ENSG00000279387.1] WARNING, no entry stored in dbm for [ENSG00000244306.11] WARNING, no entry stored in dbm for [ENSG00000206567.10] WARNING, no entry stored in dbm for [ENSG00000230590.11] WARNING, no entry stored in dbm for [ENSG00000236188.1] WARNING, no entry stored in dbm for [ENSG00000227398.4] WARNING, no entry stored in dbm for [ENSG00000172250.16] WARNING, no entry stored in dbm for [ENSG00000228463.10] WARNING, no entry stored in dbm for [ENSG00000185485.14] WARNING, no entry stored in dbm for [ENSG00000283426.1] WARNING, no entry stored in dbm for [ENSG00000196951.11] WARNING, no entry stored in dbm for [ENSG00000227373.6] WARNING, no entry stored in dbm for [ENSG00000267339.7] WARNING, no entry stored in dbm for [ENSG00000242094.1] WARNING, no entry stored in dbm for [ENSG00000228219.1] WARNING, no entry stored in dbm for [ENSG00000235036.4] WARNING, no entry stored in dbm for [ENSG00000259150.6] WARNING, no entry stored in dbm for [ENSG00000229693.2] WARNING, no entry stored in dbm for [ENSG00000262879.6] WARNING, no entry stored in dbm for [ENSG00000234741.8] WARNING, no entry stored in dbm for [ENSG00000233071.3] WARNING, no entry stored in dbm for [ENSG00000234771.3] WARNING, no entry stored in dbm for [ENSG00000259011.1] WARNING, no entry stored in dbm for [ENSG00000241318.3] WARNING, no entry stored in dbm for [ENSG00000284523.2] WARNING, no entry stored in dbm for [ENSG00000242071.3] WARNING, no entry stored in dbm for [ENSG00000220370.1] WARNING, no entry stored in dbm for [ENSG00000242834.1] WARNING, no entry stored in dbm for [ENSG00000242071.3] WARNING, no entry stored in dbm for [ENSG00000242390.1] WARNING, no entry stored in dbm for [ENSG00000230383.1] WARNING, no entry stored in dbm for [ENSG00000240540.2] WARNING, no entry stored in dbm for [ENSG00000234648.1] WARNING, no entry stored in dbm for [ENSG00000230559.1] WARNING, no entry stored in dbm for [ENSG00000241228.1] WARNING, no entry stored in dbm for [ENSG00000206975.1] WARNING, no entry stored in dbm for [ENSG00000200296.1] WARNING, no entry stored in dbm for [ENSG00000252827.1] WARNING, no entry stored in dbm for [ENSG00000285847.2] WARNING, no entry stored in dbm for [ENSG00000248866.1] WARNING, no entry stored in dbm for [ENSG00000286583.1] WARNING, no entry stored in dbm for [ENSG00000256737.1] WARNING, no entry stored in dbm for [ENSG00000241815.1] WARNING, no entry stored in dbm for [ENSG00000236603.2] WARNING, no entry stored in dbm for [ENSG00000236611.1] WARNING, no entry stored in dbm for [ENSG00000246067.8] WARNING, no entry stored in dbm for [ENSG00000285583.1] WARNING, no entry stored in dbm for [ENSG00000223806.8] WARNING, no entry stored in dbm for [ENSG00000237094.12] WARNING, no entry stored in dbm for [ENSG00000230487.8] WARNING, no entry stored in dbm for [ENSG00000223741.1] WARNING, no entry stored in dbm for [ENSG00000257621.8] WARNING, no entry stored in dbm for [ENSG00000249848.1] WARNING, no entry stored in dbm for [ENSG00000241728.5] WARNING, no entry stored in dbm for [ENSG00000248927.1] WARNING, no entry stored in dbm for [ENSG00000231259.5] WARNING, no entry stored in dbm for [ENSG00000250842.1] WARNING, no entry stored in dbm for [ENSG00000241472.7] WARNING, no entry stored in dbm for [ENSG00000205771.6] WARNING, no entry stored in dbm for [ENSG00000205771.6] WARNING, no entry stored in dbm for [ENSG00000239636.1] WARNING, no entry stored in dbm for [ENSG00000239556.4] WARNING, no entry stored in dbm for [ENSG00000269609.6] WARNING, no entry stored in dbm for [ENSG00000187953.10] WARNING, no entry stored in dbm for [ENSG00000214243.3] WARNING, no entry stored in dbm for [ENSG00000243554.1] WARNING, no entry stored in dbm for [ENSG00000279175.1] WARNING, no entry stored in dbm for [ENSG00000280262.1] WARNING, no entry stored in dbm for [ENSG00000227418.6] WARNING, no entry stored in dbm for [ENSG00000179818.14] WARNING, no entry stored in dbm for [ENSG00000226567.2] WARNING, no entry stored in dbm for [ENSG00000267058.1] WARNING, no entry stored in dbm for [ENSG00000225885.7] WARNING, no entry stored in dbm for [ENSG00000267719.1] WARNING, no entry stored in dbm for [ENSG00000255545.8] WARNING, no entry stored in dbm for [ENSG00000255493.2] WARNING, no entry stored in dbm for [ENSG00000249419.1] WARNING, no entry stored in dbm for [ENSG00000279917.1] WARNING, no entry stored in dbm for [ENSG00000223482.8] WARNING, no entry stored in dbm for [ENSG00000226328.7] WARNING, no entry stored in dbm for [ENSG00000235148.2] WARNING, no entry stored in dbm for [ENSG00000238002.3] WARNING, no entry stored in dbm for [ENSG00000235820.1] WARNING, no entry stored in dbm for [ENSG00000287656.1] WARNING, no entry stored in dbm for [ENSG00000249738.10] WARNING, no entry stored in dbm for [ENSG00000225465.10] WARNING, no entry stored in dbm for [ENSG00000228623.6] WARNING, no entry stored in dbm for [ENSG00000226891.9] WARNING, no entry stored in dbm for [ENSG00000198496.12] WARNING, no entry stored in dbm for [ENSG00000241361.8] WARNING, no entry stored in dbm for [ENSG00000228323.2] WARNING, no entry stored in dbm for [ENSG00000283426.1] WARNING, no entry stored in dbm for [ENSG00000237212.2] WARNING, no entry stored in dbm for [ENSG00000182841.12] WARNING, no entry stored in dbm for [ENSG00000232977.7] WARNING, no entry stored in dbm for [ENSG00000226754.2] WARNING, no entry stored in dbm for [ENSG00000251579.1] WARNING, no entry stored in dbm for [ENSG00000197182.14] WARNING, no entry stored in dbm for [ENSG00000259240.1] WARNING, no entry stored in dbm for [ENSG00000259240.1] WARNING, no entry stored in dbm for [ENSG00000236432.8] WARNING, no entry stored in dbm for [ENSG00000214548.18] WARNING, no entry stored in dbm for [ENSG00000219240.2] WARNING, no entry stored in dbm for [ENSG00000280229.1] WARNING, no entry stored in dbm for [ENSG00000253741.2] WARNING, no entry stored in dbm for [ENSG00000214553.10] WARNING, no entry stored in dbm for [ENSG00000228412.9] WARNING, no entry stored in dbm for [ENSG00000259666.3] WARNING, no entry stored in dbm for [ENSG00000232527.8] WARNING, no entry stored in dbm for [ENSG00000272779.1] WARNING, no entry stored in dbm for [ENSG00000231566.2] WARNING, no entry stored in dbm for [ENSG00000230587.2] WARNING, no entry stored in dbm for [ENSG00000235142.10] WARNING, no entry stored in dbm for [ENSG00000250127.1] WARNING, no entry stored in dbm for [ENSG00000234634.2] WARNING, no entry stored in dbm for [ENSG00000236008.3] WARNING, no entry stored in dbm for [ENSG00000228262.10] WARNING, no entry stored in dbm for [ENSG00000237092.2] WARNING, no entry stored in dbm for [ENSG00000241769.7] WARNING, no entry stored in dbm for [ENSG00000245060.8] WARNING, no entry stored in dbm for [ENSG00000235621.9] WARNING, no entry stored in dbm for [ENSG00000232931.6] WARNING, no entry stored in dbm for [ENSG00000178977.3] WARNING, no entry stored in dbm for [ENSG00000224924.7] WARNING, no entry stored in dbm for [ENSG00000236790.6] WARNING, no entry stored in dbm for [ENSG00000188185.13] WARNING, no entry stored in dbm for [ENSG00000179406.8] WARNING, no entry stored in dbm for [ENSG00000231721.7] WARNING, no entry stored in dbm for [ENSG00000258377.1] WARNING, no entry stored in dbm for [ENSG00000230563.4] WARNING, no entry stored in dbm for [ENSG00000177369.9] WARNING, no entry stored in dbm for [ENSG00000259236.1] WARNING, no entry stored in dbm for [ENSG00000214514.8] WARNING, no entry stored in dbm for [ENSG00000248725.3] WARNING, no entry stored in dbm for [ENSG00000239569.3] WARNING, no entry stored in dbm for [ENSG00000258792.4] WARNING, no entry stored in dbm for [ENSG00000251034.2] WARNING, no entry stored in dbm for [ENSG00000252549.1] WARNING, no entry stored in dbm for [ENSG00000261173.1] WARNING, no entry stored in dbm for [ENSG00000287076.1] WARNING, no entry stored in dbm for [ENSG00000229926.1] WARNING, no entry stored in dbm for [ENSG00000286675.1] WARNING, no entry stored in dbm for [ENSG00000214182.5] WARNING, no entry stored in dbm for [ENSG00000219102.3] WARNING, no entry stored in dbm for [ENSG00000232875.1] WARNING, no entry stored in dbm for [ENSG00000212694.8] WARNING, no entry stored in dbm for [ENSG00000253774.1] WARNING, no entry stored in dbm for [ENSG00000214922.9] WARNING, no entry stored in dbm for [ENSG00000281344.1] WARNING, no entry stored in dbm for [ENSG00000241170.3] WARNING, no entry stored in dbm for [ENSG00000255980.1] WARNING, no entry stored in dbm for [ENSG00000234945.8] WARNING, no entry stored in dbm for [ENSG00000234945.8] WARNING, no entry stored in dbm for [ENSG00000251451.1] WARNING, no entry stored in dbm for [ENSG00000230189.7] WARNING, no entry stored in dbm for [ENSG00000233073.2] WARNING, no entry stored in dbm for [ENSG00000231407.6] WARNING, no entry stored in dbm for [ENSG00000213857.3] WARNING, no entry stored in dbm for [ENSG00000214433.4] WARNING, no entry stored in dbm for [ENSG00000238105.7] WARNING, no entry stored in dbm for [ENSG00000257489.6] WARNING, no entry stored in dbm for [ENSG00000260701.2] WARNING, no entry stored in dbm for [ENSG00000288052.1] WARNING, no entry stored in dbm for [ENSG00000224837.1] WARNING, no entry stored in dbm for [ENSG00000234741.8] WARNING, no entry stored in dbm for [ENSG00000254601.1] WARNING, no entry stored in dbm for [ENSG00000285967.1] WARNING, no entry stored in dbm for [ENSG00000215483.11] WARNING, no entry stored in dbm for [ENSG00000244627.5] WARNING, no entry stored in dbm for [ENSG00000275374.1] WARNING, no entry stored in dbm for [ENSG00000260167.1] WARNING, no entry stored in dbm for [ENSG00000248736.3] WARNING, no entry stored in dbm for [ENSG00000235768.1] WARNING, no entry stored in dbm for [ENSG00000269420.5] WARNING, no entry stored in dbm for [ENSG00000279516.2] WARNING, no entry stored in dbm for [ENSG00000187172.15] WARNING, no entry stored in dbm for [ENSG00000255650.6] WARNING, no entry stored in dbm for [ENSG00000272142.4] WARNING, no entry stored in dbm for [ENSG00000236438.7] WARNING, no entry stored in dbm for [ENSG00000225393.1] WARNING, no entry stored in dbm for [ENSG00000279176.1] WARNING, no entry stored in dbm for [ENSG00000249859.12] WARNING, no entry stored in dbm for [ENSG00000278733.1] WARNING, no entry stored in dbm for [ENSG00000230613.1] WARNING, no entry stored in dbm for [ENSG00000204623.9] WARNING, no entry stored in dbm for [ENSG00000279390.1] WARNING, no entry stored in dbm for [ENSG00000200169.1] WARNING, no entry stored in dbm for [ENSG00000254490.1] WARNING, no entry stored in dbm for [ENSG00000244306.11] WARNING, no entry stored in dbm for [ENSG00000235316.1] WARNING, no entry stored in dbm for [ENSG00000267868.1] WARNING, no entry stored in dbm for [ENSG00000229236.3] WARNING, no entry stored in dbm for [ENSG00000262001.1] WARNING, no entry stored in dbm for [ENSG00000231607.13] WARNING, no entry stored in dbm for [ENSG00000239556.4] WARNING, no entry stored in dbm for [ENSG00000213187.3] WARNING, no entry stored in dbm for [ENSG00000228305.2] WARNING, no entry stored in dbm for [ENSG00000251562.8] WARNING, no entry stored in dbm for [ENSG00000231871.5] WARNING, no entry stored in dbm for [ENSG00000253194.2] WARNING, no entry stored in dbm for [ENSG00000226950.8] WARNING, no entry stored in dbm for [ENSG00000226950.8] WARNING, no entry stored in dbm for [ENSG00000226950.8] WARNING, no entry stored in dbm for [ENSG00000226950.8] WARNING, no entry stored in dbm for [ENSG00000279480.1] WARNING, no entry stored in dbm for [ENSG00000222041.11] WARNING, no entry stored in dbm for [ENSG00000286458.1] WARNING, no entry stored in dbm for [ENSG00000235499.1] WARNING, no entry stored in dbm for [ENSG00000278903.3] WARNING, no entry stored in dbm for [ENSG00000242193.11] WARNING, no entry stored in dbm for [ENSG00000215908.10] WARNING, no entry stored in dbm for [ENSG00000215908.10] WARNING, no entry stored in dbm for [ENSG00000279381.1] WARNING, no entry stored in dbm for [ENSG00000226435.10] WARNING, no entry stored in dbm for [ENSG00000279208.1] WARNING, no entry stored in dbm for [ENSG00000278931.1] WARNING, no entry stored in dbm for [ENSG00000224568.2] WARNING, no entry stored in dbm for [ENSG00000235038.1] WARNING, no entry stored in dbm for [ENSG00000251339.6] WARNING, no entry stored in dbm for [ENSG00000276786.1] WARNING, no entry stored in dbm for [ENSG00000231304.2] WARNING, no entry stored in dbm for [ENSG00000268388.6] WARNING, no entry stored in dbm for [ENSG00000204790.9] WARNING, no entry stored in dbm for [ENSG00000237187.9] WARNING, no entry stored in dbm for [ENSG00000205231.1] WARNING, no entry stored in dbm for [ENSG00000262248.1] WARNING, no entry stored in dbm for [ENSG00000214548.18] WARNING, no entry stored in dbm for [ENSG00000261124.1] WARNING, no entry stored in dbm for [ENSG00000267520.2] WARNING, no entry stored in dbm for [ENSG00000279847.3] WARNING, no entry stored in dbm for [ENSG00000178722.13] WARNING, no entry stored in dbm for [ENSG00000280016.1] WARNING, no entry stored in dbm for [ENSG00000188511.12] WARNING, no entry stored in dbm for [ENSG00000231424.3] WARNING, no entry stored in dbm for [ENSG00000243439.3] WARNING, no entry stored in dbm for [ENSG00000271699.5] WARNING, no entry stored in dbm for [ENSG00000187172.15] WARNING, no entry stored in dbm for [ENSG00000187172.15] WARNING, no entry stored in dbm for [ENSG00000270855.1] WARNING, no entry stored in dbm for [ENSG00000285848.1] WARNING, no entry stored in dbm for [ENSG00000260422.1] WARNING, no entry stored in dbm for [ENSG00000237140.2] WARNING, no entry stored in dbm for [ENSG00000227948.4] WARNING, no entry stored in dbm for [ENSG00000225662.2] WARNING, no entry stored in dbm for [ENSG00000254057.1] WARNING, no entry stored in dbm for [ENSG00000247381.3] WARNING, no entry stored in dbm for [ENSG00000243069.8] WARNING, no entry stored in dbm for [ENSG00000233820.2] WARNING, no entry stored in dbm for [ENSG00000226777.7] WARNING, no entry stored in dbm for [ENSG00000280032.1] WARNING, no entry stored in dbm for [ENSG00000286044.1] WARNING, no entry stored in dbm for [ENSG00000264964.2] WARNING, no entry stored in dbm for [ENSG00000235903.9] WARNING, no entry stored in dbm for [ENSG00000261019.1] WARNING, no entry stored in dbm for [ENSG00000257337.7] WARNING, no entry stored in dbm for [ENSG00000273192.1] WARNING, no entry stored in dbm for [ENSG00000230006.7] WARNING, no entry stored in dbm for [ENSG00000231317.1] WARNING, no entry stored in dbm for [ENSG00000236816.3] WARNING, no entry stored in dbm for [ENSG00000250769.2] WARNING, no entry stored in dbm for [ENSG00000283317.1] WARNING, no entry stored in dbm for [ENSG00000271581.1] WARNING, no entry stored in dbm for [ENSG00000283360.1] WARNING, no entry stored in dbm for [ENSG00000234396.3] WARNING, no entry stored in dbm for [ENSG00000218027.2] WARNING, no entry stored in dbm for [ENSG00000237938.5] WARNING, no entry stored in dbm for [ENSG00000225096.3] WARNING, no entry stored in dbm for [ENSG00000225096.3] WARNING, no entry stored in dbm for [ENSG00000260404.3] WARNING, no entry stored in dbm for [ENSG00000227619.3] WARNING, no entry stored in dbm for [ENSG00000227619.3] WARNING, no entry stored in dbm for [ENSG00000227619.3] WARNING, no entry stored in dbm for [ENSG00000250090.1] WARNING, no entry stored in dbm for [ENSG00000287569.1] WARNING, no entry stored in dbm for [ENSG00000235582.2] WARNING, no entry stored in dbm for [ENSG00000215016.2] WARNING, no entry stored in dbm for [ENSG00000287516.1] WARNING, no entry stored in dbm for [ENSG00000287564.1] WARNING, no entry stored in dbm for [ENSG00000279096.2] WARNING, no entry stored in dbm for [ENSG00000236680.1] WARNING, no entry stored in dbm for [ENSG00000231616.9] WARNING, no entry stored in dbm for [ENSG00000258656.1] WARNING, no entry stored in dbm for [ENSG00000226987.1] WARNING, no entry stored in dbm for [ENSG00000243517.1] WARNING, no entry stored in dbm for [ENSG00000230490.3] WARNING, no entry stored in dbm for [ENSG00000233183.3] WARNING, no entry stored in dbm for [ENSG00000279951.1] WARNING, no entry stored in dbm for [ENSG00000258727.1] WARNING, no entry stored in dbm for [ENSG00000231881.2] WARNING, no entry stored in dbm for [ENSG00000228697.4] WARNING, no entry stored in dbm for [ENSG00000213107.2] WARNING, no entry stored in dbm for [ENSG00000230869.1] WARNING, no entry stored in dbm for [ENSG00000272140.2] WARNING, no entry stored in dbm for [ENSG00000224016.2] WARNING, no entry stored in dbm for [ENSG00000269604.1] WARNING, no entry stored in dbm for [ENSG00000236255.2] WARNING, no entry stored in dbm for [ENSG00000240197.1] WARNING, no entry stored in dbm for [ENSG00000285018.1] WARNING, no entry stored in dbm for [ENSG00000277702.1] WARNING, no entry stored in dbm for [ENSG00000287190.1] WARNING, no entry stored in dbm for [ENSG00000277125.1] WARNING, no entry stored in dbm for [ENSG00000242435.1] WARNING, no entry stored in dbm for [ENSG00000277125.1] WARNING, no entry stored in dbm for [ENSG00000275807.1] WARNING, no entry stored in dbm for [ENSG00000246596.7] WARNING, no entry stored in dbm for [ENSG00000260126.2] WARNING, no entry stored in dbm for [ENSG00000261448.1] WARNING, no entry stored in dbm for [ENSG00000278212.2] WARNING, no entry stored in dbm for [ENSG00000278212.2] WARNING, no entry stored in dbm for [ENSG00000278212.2] WARNING, no entry stored in dbm for [ENSG00000271009.3] WARNING, no entry stored in dbm for [ENSG00000197149.5] WARNING, no entry stored in dbm for [ENSG00000224479.6] WARNING, no entry stored in dbm for [ENSG00000251314.2] WARNING, no entry stored in dbm for [ENSG00000272763.1] WARNING, no entry stored in dbm for [ENSG00000286152.1] WARNING, no entry stored in dbm for [ENSG00000253284.2] WARNING, no entry stored in dbm for [ENSG00000285035.1] WARNING, no entry stored in dbm for [ENSG00000266356.1] WARNING, no entry stored in dbm for [ENSG00000213650.3] WARNING, no entry stored in dbm for [ENSG00000285331.2] WARNING, no entry stored in dbm for [ENSG00000255920.3] WARNING, no entry stored in dbm for [ENSG00000253878.5] WARNING, no entry stored in dbm for [ENSG00000262580.5] WARNING, no entry stored in dbm for [ENSG00000259722.2] WARNING, no entry stored in dbm for [ENSG00000255182.2] WARNING, no entry stored in dbm for [ENSG00000250546.6] WARNING, no entry stored in dbm for [ENSG00000259605.3] WARNING, no entry stored in dbm for [ENSG00000226232.8] WARNING, no entry stored in dbm for [ENSG00000231892.1] WARNING, no entry stored in dbm for [ENSG00000283537.2] WARNING, no entry stored in dbm for [ENSG00000239985.2] WARNING, no entry stored in dbm for [ENSG00000287291.1] WARNING, no entry stored in dbm for [ENSG00000286856.1] WARNING, no entry stored in dbm for [ENSG00000279887.1] WARNING, no entry stored in dbm for [ENSG00000287408.1] WARNING, no entry stored in dbm for [ENSG00000259354.5] WARNING, no entry stored in dbm for [ENSG00000285600.1] WARNING, no entry stored in dbm for [ENSG00000263657.1] WARNING, no entry stored in dbm for [ENSG00000266521.1] WARNING, no entry stored in dbm for [ENSG00000285106.2] WARNING, no entry stored in dbm for [ENSG00000226380.9] WARNING, no entry stored in dbm for [ENSG00000269032.1] WARNING, no entry stored in dbm for [ENSG00000253620.2] WARNING, no entry stored in dbm for [ENSG00000261329.6] WARNING, no entry stored in dbm for [ENSG00000232386.9] WARNING, no entry stored in dbm for [ENSG00000274895.1] WARNING, no entry stored in dbm for [ENSG00000249839.1] WARNING, no entry stored in dbm for [ENSG00000235522.6] WARNING, no entry stored in dbm for [ENSG00000225840.2] WARNING, no entry stored in dbm for [ENSG00000277977.1] WARNING, no entry stored in dbm for [ENSG00000226063.1] WARNING, no entry stored in dbm for [ENSG00000270049.3] WARNING, no entry stored in dbm for [ENSG00000260364.1] WARNING, no entry stored in dbm for [ENSG00000260905.1] WARNING, no entry stored in dbm for [ENSG00000257403.2] WARNING, no entry stored in dbm for [ENSG00000189149.12] WARNING, no entry stored in dbm for [ENSG00000249526.1] WARNING, no entry stored in dbm for [ENSG00000229855.9] WARNING, no entry stored in dbm for [ENSG00000260249.3] WARNING, no entry stored in dbm for [ENSG00000257221.4] WARNING, no entry stored in dbm for [ENSG00000274712.2] WARNING, no entry stored in dbm for [ENSG00000239556.4] WARNING, no entry stored in dbm for [ENSG00000239556.4] WARNING, no entry stored in dbm for [ENSG00000280054.1] WARNING, no entry stored in dbm for [ENSG00000267344.1] WARNING, no entry stored in dbm for [ENSG00000257268.1] WARNING, no entry stored in dbm for [ENSG00000267698.1] WARNING, no entry stored in dbm for [ENSG00000288543.1] * STAR-Fusion complete. See output: /tmp/nxf.509zlXEi2u/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)