Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a0/5b721af0c9e693cd9101ea589f3746/tih_rna_sample_00096_B23WHTKLT4_1.Aligned.sortedByCoord.out.bam.bai
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/starfusion/ctat_genome_lib_build_dir/ref_genome.fa
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/93/935ca404118532a72e9123a495880b/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/93/935ca404118532a72e9123a495880b/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/48/7e3247897aba296b4df1cf426480e5/tih_rna_sample_00096_B23WHTKLT4_1.Aligned.sortedByCoord.out.bam
==> STAGING COMPLETE (5 inputs)

ls: *.sam: No such file or directory
ls: *.csi: No such file or directory
ls: *.crai: No such file or directory