Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/83/80946f8cd73c7c4415a74e04132b55/659_bGc-T1-TRNA-1_B23WHTKLT4_1.features.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/18/ff760da320c379dfd284233fc66134/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/18/ff760da320c379dfd284233fc66134/.command.run
==> STAGING COMPLETE (3 inputs)

Predicting contamination for 1 sample(s)...
Detection threshold: VAF_p90 < 0.9999
Level estimation: contamination_pct = -215.87 * vaf_p90 + 215.65

  659_bGc-T1-TRNA-1_B23WHTKLT4_1: vaf_p90=1.000000 -> CLEAN

Output saved to: 659_bGc-T1-TRNA-1_B23WHTKLT4_1.predictions.csv
Summary: 0/1 samples flagged as contaminated