AIH curated blacklist: matched 10 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 268
Pass (FILTER=PASS): 31 (11.6%)
Fail (FILTER=FAIL): 237 (88.4%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 10
All 10 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 66
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 33
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 24
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 17
confidence_below_min(low<high): 16
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 15
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 10
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 9
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 9
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 8
confidence_below_min(low<high);total_reads_below_min(7.0<8.0): 4
confidence_below_min(low<high);total_reads_below_min(6.0<8.0): 4
confidence_below_min(medium<high);total_reads_below_min(2.0<8.0): 3
confidence_below_min(low<high);aih_curated_blacklist: 3
confidence_below_min(medium<high);total_reads_below_min(7.0<8.0): 2
Breakdown by confidence:
high: 31 pass, 8 fail (total: 39)
low: 0 pass, 124 fail (total: 124)
medium: 0 pass, 105 fail (total: 105)
Arriba filter: 268 rows -> 31 PASS; wrote tih_rna_sample_00089_B23WHTKLT4_2.arriba.fusions.filtered.tsv and tih_rna_sample_00089_B23WHTKLT4_2.arriba.fusions.filtered_pass_only.tsv
Summary written to: tih_rna_sample_00089_B23WHTKLT4_2.arriba.fusions.filter_summary.txt