File Info

Filename
fi_workdir/Log.final.out
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/fa/0b8eee8f9e7f900c5953d4571c6f85/fi_workdir/Log.final.out
Size
2.0 KB
Attempt
                                 Started job on |	Jun 08 09:51:42
                             Started mapping on |	Jun 08 09:58:08
                                    Finished on |	Jun 08 10:58:17
       Mapping speed, Million of reads per hour |	295.04

                          Number of input reads |	295776955
                      Average input read length |	256
                                    UNIQUE READS:
                   Uniquely mapped reads number |	285968369
                        Uniquely mapped reads % |	96.68%
                          Average mapped length |	255.81
                       Number of splices: Total |	320731031
            Number of splices: Annotated (sjdb) |	315852695
                       Number of splices: GT/AG |	316986849
                       Number of splices: GC/AG |	1997124
                       Number of splices: AT/AC |	215974
               Number of splices: Non-canonical |	1531084
                      Mismatch rate per base, % |	0.24%
                         Deletion rate per base |	0.03%
                        Deletion average length |	2.11
                        Insertion rate per base |	0.00%
                       Insertion average length |	1.76
                             MULTI-MAPPING READS:
        Number of reads mapped to multiple loci |	7215364
             % of reads mapped to multiple loci |	2.44%
        Number of reads mapped to too many loci |	303253
             % of reads mapped to too many loci |	0.10%
                                  UNMAPPED READS:
  Number of reads unmapped: too many mismatches |	0
       % of reads unmapped: too many mismatches |	0.00%
            Number of reads unmapped: too short |	2004217
                 % of reads unmapped: too short |	0.68%
                Number of reads unmapped: other |	285752
                     % of reads unmapped: other |	0.10%
                                  CHIMERIC READS:
                       Number of chimeric reads |	0
                            % of chimeric reads |	0.00%