File Info

Filename
fi_workdir/Log.final.out
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/df/fe09ca710bbbb1cff91bf74619cec3/fi_workdir/Log.final.out
Size
2.0 KB
Attempt
                                 Started job on |	Jun 08 10:08:38
                             Started mapping on |	Jun 08 10:15:28
                                    Finished on |	Jun 08 11:31:02
       Mapping speed, Million of reads per hour |	234.37

                          Number of input reads |	295174898
                      Average input read length |	258
                                    UNIQUE READS:
                   Uniquely mapped reads number |	284851790
                        Uniquely mapped reads % |	96.50%
                          Average mapped length |	257.56
                       Number of splices: Total |	328108500
            Number of splices: Annotated (sjdb) |	323636583
                       Number of splices: GT/AG |	324341964
                       Number of splices: GC/AG |	2153020
                       Number of splices: AT/AC |	263310
               Number of splices: Non-canonical |	1350206
                      Mismatch rate per base, % |	0.20%
                         Deletion rate per base |	0.03%
                        Deletion average length |	2.06
                        Insertion rate per base |	0.00%
                       Insertion average length |	1.53
                             MULTI-MAPPING READS:
        Number of reads mapped to multiple loci |	7493367
             % of reads mapped to multiple loci |	2.54%
        Number of reads mapped to too many loci |	447736
             % of reads mapped to too many loci |	0.15%
                                  UNMAPPED READS:
  Number of reads unmapped: too many mismatches |	0
       % of reads unmapped: too many mismatches |	0.00%
            Number of reads unmapped: too short |	2076776
                 % of reads unmapped: too short |	0.70%
                Number of reads unmapped: other |	305229
                     % of reads unmapped: other |	0.10%
                                  CHIMERIC READS:
                       Number of chimeric reads |	0
                            % of chimeric reads |	0.00%