File Info

Filename
fi_workdir/Log.final.out
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b1/d0568d9db5fb1ad0f942113dc1a4dd/fi_workdir/Log.final.out
Size
2.0 KB
Attempt
                                 Started job on |	Jun 08 10:06:55
                             Started mapping on |	Jun 08 10:13:35
                                    Finished on |	Jun 08 11:32:20
       Mapping speed, Million of reads per hour |	225.01

                          Number of input reads |	295331131
                      Average input read length |	262
                                    UNIQUE READS:
                   Uniquely mapped reads number |	284679409
                        Uniquely mapped reads % |	96.39%
                          Average mapped length |	261.56
                       Number of splices: Total |	348194459
            Number of splices: Annotated (sjdb) |	343477865
                       Number of splices: GT/AG |	344390675
                       Number of splices: GC/AG |	2235629
                       Number of splices: AT/AC |	230353
               Number of splices: Non-canonical |	1337802
                      Mismatch rate per base, % |	0.24%
                         Deletion rate per base |	0.02%
                        Deletion average length |	1.96
                        Insertion rate per base |	0.00%
                       Insertion average length |	1.54
                             MULTI-MAPPING READS:
        Number of reads mapped to multiple loci |	7938401
             % of reads mapped to multiple loci |	2.69%
        Number of reads mapped to too many loci |	459679
             % of reads mapped to too many loci |	0.16%
                                  UNMAPPED READS:
  Number of reads unmapped: too many mismatches |	0
       % of reads unmapped: too many mismatches |	0.00%
            Number of reads unmapped: too short |	2064600
                 % of reads unmapped: too short |	0.70%
                Number of reads unmapped: other |	189042
                     % of reads unmapped: other |	0.06%
                                  CHIMERIC READS:
                       Number of chimeric reads |	0
                            % of chimeric reads |	0.00%