AIH curated blacklist: matched 6 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 174
Pass (FILTER=PASS): 11 (6.3%)
Fail (FILTER=FAIL): 163 (93.7%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 6
All 6 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 63
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 16
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 13
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 13
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 11
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 10
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 6
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 6
confidence_below_min(low<high): 6
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 4
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 4
confidence_below_min(medium<high);aih_curated_blacklist: 3
confidence_below_min(low<high);total_reads_below_min(7.0<8.0): 2
total_reads_below_min(5.0<8.0): 1
total_reads_below_min(3.0<8.0);aih_curated_blacklist: 1
Breakdown by confidence:
high: 11 pass, 3 fail (total: 14)
low: 0 pass, 56 fail (total: 56)
medium: 0 pass, 104 fail (total: 104)
Arriba filter: 174 rows -> 11 PASS; wrote 659_ciJ-T1-TRNA-1_B23WHTKLT4_1.arriba.fusions.filtered.tsv and 659_ciJ-T1-TRNA-1_B23WHTKLT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: 659_ciJ-T1-TRNA-1_B23WHTKLT4_1.arriba.fusions.filter_summary.txt