AIH curated blacklist: matched 6 fusion rows (breakpoint_ID in qualified set)
================================================================================
ARRIBA FILTERING SUMMARY
================================================================================
Total fusions: 157
Pass (FILTER=PASS): 19 (12.1%)
Fail (FILTER=FAIL): 138 (87.9%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 6
All 6 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 59
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 15
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 10
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 10
confidence_below_min(low<high): 8
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 8
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 6
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 3
confidence_below_min(medium<high);aih_curated_blacklist: 3
confidence_below_min(medium<high);total_reads_below_min(7.0<8.0): 3
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 3
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 3
confidence_below_min(low<high);total_reads_below_min(2.0<8.0);aih_curated_blacklist: 1
total_reads_below_min(3.0<8.0): 1
confidence_below_min(low<high);aih_curated_blacklist: 1
Breakdown by confidence:
high: 19 pass, 1 fail (total: 20)
low: 0 pass, 51 fail (total: 51)
medium: 0 pass, 86 fail (total: 86)
Arriba filter: 157 rows -> 19 PASS; wrote tih_rna_sample_00434_B23WHTKLT4_1.arriba.fusions.filtered.tsv and tih_rna_sample_00434_B23WHTKLT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: tih_rna_sample_00434_B23WHTKLT4_1.arriba.fusions.filter_summary.txt