Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/starfusion/ctat_genome_lib_build_dir Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/61/8f45fd2eb51d82dd397ffdc1de7cdc/659_bGc-T1-TRNA-1_B23WHTKLT4_1.Chimeric.out.junction Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/13/75a742128c51a3dec97f49d438de43/.command.sh Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/13/75a742128c51a3dec97f49d438de43/.command.run Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e6/e9cac3909e5c2ce02225678486f15e/659_bGc-T1-TRNA-1_B23WHTKLT4_1_1.fastp.fastq.gz Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e6/e9cac3909e5c2ce02225678486f15e/659_bGc-T1-TRNA-1_B23WHTKLT4_1_2.fastp.fastq.gz ==> STAGING COMPLETE (6 inputs) -ctat genome lib [/tmp/nxf.0ieyki3J3l/ctat_genome_lib_build_dir] validates. CMD: mkdir -p /tmp/nxf.0ieyki3J3l/./_starF_checkpoints CMD: mkdir -p /tmp/nxf.0ieyki3J3l/./star-fusion.preliminary -sample contains 190989666 rnaseq fragments * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes --genome_lib_dir /tmp/nxf.0ieyki3J3l/ctat_genome_lib_build_dir -J /tmp/nxf.0ieyki3J3l/659_bGc-T1-TRNA-1_B23WHTKLT4_1.Chimeric.out.junction -O /tmp/nxf.0ieyki3J3l/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4 -parsing fusion evidence: /tmp/nxf.0ieyki3J3l/659_bGc-T1-TRNA-1_B23WHTKLT4_1.Chimeric.out.junction -building interval tree based on /tmp/nxf.0ieyki3J3l/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.07 min). -mapping reads to genes [10000], rate=66666.67/min [20000], rate=70588.24/min [30000], rate=69230.77/min [40000], rate=72727.27/min [50000], rate=75000.00/min [60000], rate=75000.00/min [70000], rate=76363.64/min [80000], rate=77419.35/min [90000], rate=78260.87/min [100000], rate=80000.00/min [110000], rate=81481.48/min [120000], rate=83720.93/min [130000], rate=86666.67/min [140000], rate=88421.05/min [150000], rate=90000.00/min [160000], rate=91428.57/min [170000], rate=85000.00/min [180000], rate=78832.12/min [190000], rate=74509.80/min [200000], rate=71005.92/min [210000], rate=68852.46/min [220000], rate=66666.67/min [230000], rate=64788.73/min [240000], rate=63716.81/min [250000], rate=62500.00/min [260000], rate=61417.32/min [270000], rate=60674.16/min [280000], rate=60000.00/min [290000], rate=58983.05/min [300000], rate=58064.52/min [310000], rate=57230.77/min [320000], rate=57142.86/min [330000], rate=56733.52/min [340000], rate=56198.35/min [350000], rate=56149.73/min [360000], rate=56103.90/min [370000], rate=56345.18/min [380000], rate=56435.64/min [390000], rate=56385.54/min [400000], rate=56338.03/min [410000], rate=56422.02/min [420000], rate=56502.24/min [430000], rate=56703.30/min [440000], rate=56896.55/min [450000], rate=57203.39/min [460000], rate=57380.46/min [470000], rate=57551.02/min [480000], rate=58064.52/min [490000], rate=58682.63/min [500000], rate=59055.12/min [510000], rate=59533.07/min [520000], rate=60115.61/min [530000], rate=60456.27/min [540000], rate=60902.26/min [550000], rate=61452.51/min [560000], rate=61878.45/min [570000], rate=62295.08/min [580000], rate=62702.70/min [590000], rate=62989.32/min [600000], rate=62937.06/min [610000], rate=62994.84/min [620000], rate=63050.85/min [630000], rate=63210.70/min [640000], rate=63366.34/min [650000], rate=63621.53/min [660000], rate=63870.97/min [670000], rate=64217.25/min [680000], rate=64454.98/min [690000], rate=64687.50/min [700000], rate=65116.28/min [710000], rate=65437.79/min [720000], rate=65653.50/min [730000], rate=66163.14/min [740000], rate=66666.67/min [750000], rate=66964.29/min [760000], rate=67355.98/min [770000], rate=67445.26/min [780000], rate=67924.53/min [790000], rate=68103.45/min [800000], rate=68669.53/min [810000], rate=69034.09/min [820000], rate=69393.51/min [830000], rate=70140.85/min [840000], rate=70588.24/min [850000], rate=70735.09/min [860000], rate=70879.12/min [870000], rate=71311.48/min [880000], rate=71641.79/min [890000], rate=71774.19/min [900000], rate=71904.13/min [910000], rate=72031.66/min [920000], rate=72251.31/min [930000], rate=72467.53/min [940000], rate=72868.22/min [950000], rate=72890.03/min [960000], rate=72819.22/min [970000], rate=72750.00/min [980000], rate=72862.45/min [990000], rate=72972.97/min [1000000], rate=72992.70/min [1010000], rate=73100.12/min [1020000], rate=73118.28/min [1030000], rate=73309.61/min [1040000], rate=73411.76/min [1050000], rate=73598.13/min [1060000], rate=73696.41/min [1070000], rate=73878.02/min [1080000], rate=74057.14/min [1090000], rate=74233.83/min [1100000], rate=74408.12/min [1110000], rate=74580.07/min [1120000], rate=74336.28/min [1130000], rate=73060.34/min [1140000], rate=71924.29/min [1150000], rate=70914.70/min [1160000], rate=70090.63/min [1170000], rate=69504.95/min [1180000], rate=69275.93/min [1190000], rate=68390.80/min [1200000], rate=67605.63/min [1210000], rate=66850.83/min [1220000], rate=66064.98/min [1230000], rate=65541.74/min [1240000], rate=64864.86/min [1250000], rate=64432.99/min [1260000], rate=63959.39/min [1270000], rate=63606.01/min [1280000], rate=63366.34/min [1290000], rate=63029.32/min [1300000], rate=62801.93/min [1310000], rate=62380.95/min [1320000], rate=62215.24/min [1330000], rate=62149.53/min [1340000], rate=62180.97/min [1350000], rate=62211.98/min [1360000], rate=62337.66/min [1370000], rate=62462.01/min [1380000], rate=62349.40/min [1390000], rate=62146.05/min [1400000], rate=61538.46/min [1410000], rate=61215.63/min [1420000], rate=60770.33/min [1430000], rate=60507.76/min [1440000], rate=60000.00/min [1450000], rate=59793.81/min [1460000], rate=59149.22/min [1470000], rate=59036.14/min [1480000], rate=58925.02/min [1490000], rate=58893.28/min [1500000], rate=58670.14/min [1510000], rate=58039.72/min [1520000], rate=58015.27/min [1530000], rate=58101.27/min [1540000], rate=58186.40/min [1550000], rate=58307.21/min [1560000], rate=58100.56/min -building interval tree based on /tmp/nxf.0ieyki3J3l/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.07 min). -mapping reads to genes [10000], rate=120000.00/min [20000], rate=60000.00/min [30000], rate=54545.45/min [40000], rate=52173.91/min [50000], rate=53571.43/min [60000], rate=52941.18/min [70000], rate=53846.15/min [80000], rate=54545.45/min [90000], rate=55102.04/min [100000], rate=55555.56/min [110000], rate=56410.26/min [120000], rate=57142.86/min [130000], rate=56934.31/min [140000], rate=57931.03/min [150000], rate=58441.56/min [160000], rate=59627.33/min [170000], rate=61445.78/min [180000], rate=62790.70/min [190000], rate=63687.15/min [200000], rate=64864.86/min [210000], rate=65625.00/min [220000], rate=66331.66/min [230000], rate=66990.29/min [240000], rate=67924.53/min [250000], rate=68807.34/min [260000], rate=69642.86/min [270000], rate=70742.36/min [280000], rate=71794.87/min [290000], rate=72803.35/min [300000], rate=73770.49/min [310000], rate=75000.00/min [320000], rate=75590.55/min [330000], rate=76153.85/min [340000], rate=74725.27/min [350000], rate=73170.73/min [360000], rate=72240.80/min [370000], rate=71382.64/min [380000], rate=71028.04/min [390000], rate=70270.27/min [400000], rate=69565.22/min [410000], rate=69295.77/min [420000], rate=68852.46/min [430000], rate=68073.88/min [440000], rate=67346.94/min [450000], rate=66997.52/min [460000], rate=66506.02/min [470000], rate=66666.67/min [480000], rate=66359.45/min [490000], rate=65919.28/min [500000], rate=65502.18/min [510000], rate=65106.38/min [520000], rate=64730.29/min [530000], rate=64503.04/min [540000], rate=64285.71/min [550000], rate=64077.67/min [560000], rate=64000.00/min [570000], rate=64044.94/min [580000], rate=64088.40/min [590000], rate=64246.82/min [600000], rate=64631.96/min [610000], rate=64778.76/min [620000], rate=65034.97/min [630000], rate=65284.97/min [640000], rate=65529.01/min [650000], rate=65878.38/min [660000], rate=66220.74/min [670000], rate=66118.42/min [680000], rate=64659.27/min [690000], rate=63302.75/min [700000], rate=62130.18/min [710000], rate=61206.90/min [720000], rate=60504.20/min [730000], rate=59591.84/min [740000], rate=59200.00/min [750000], rate=58593.75/min [760000], rate=58163.27/min [770000], rate=57967.38/min [780000], rate=57849.20/min [790000], rate=57384.99/min [800000], rate=57347.67/min [810000], rate=57243.82/min [820000], rate=57275.90/min [830000], rate=57110.09/min [840000], rate=57142.86/min [850000], rate=57239.06/min [860000], rate=57397.11/min [870000], rate=57552.37/min [880000], rate=57641.92/min [890000], rate=57729.73/min [900000], rate=57939.91/min [910000], rate=58208.96/min [920000], rate=58474.58/min [930000], rate=58736.84/min [940000], rate=58995.82/min [950000], rate=59067.36/min [960000], rate=58775.51/min [970000], rate=58316.63/min [980000], rate=58102.77/min [990000], rate=57838.36/min [1000000], rate=57581.57/min [1010000], rate=57332.07/min [1020000], rate=57196.26/min [1030000], rate=57011.07/min [1040000], rate=56882.41/min [1050000], rate=56859.21/min [1060000], rate=56785.71/min [1070000], rate=56814.16/min [1080000], rate=56842.11/min [1090000], rate=56919.06/min [1100000], rate=57044.08/min [1110000], rate=57216.49/min [1120000], rate=57386.85/min [1130000], rate=57653.06/min [1140000], rate=57966.10/min [1150000], rate=58277.03/min [1160000], rate=58536.59/min [1170000], rate=58744.77/min [1180000], rate=58950.87/min [1190000], rate=58476.66/min [1200000], rate=58252.43/min [1210000], rate=57619.05/min [1220000], rate=57411.76/min [1230000], rate=57120.74/min [1240000], rate=57055.21/min [1250000], rate=56947.61/min [1260000], rate=56417.91/min [1270000], rate=56402.66/min [1280000], rate=56470.59/min [1290000], rate=56455.14/min [1300000], rate=56521.74/min [1310000], rate=56465.52/min [1320000], rate=56450.46/min [1330000], rate=56435.64/min [1340000], rate=56540.08/min [1350000], rate=56722.69/min [1360000], rate=56864.11/min [1370000], rate=56925.21/min [1380000], rate=57064.09/min [1390000], rate=57240.91/min [1400000], rate=56641.94/min [1410000], rate=55731.23/min [1420000], rate=54932.30/min [1430000], rate=54824.28/min [1440000], rate=54718.18/min [1450000], rate=54682.59/min [1460000], rate=54681.65/min [1470000], rate=54646.84/min [1480000], rate=54679.80/min [1490000], rate=54712.36/min [1500000], rate=54811.21/min [1510000], rate=54875.83/min [1520000], rate=54972.88/min [1530000], rate=55135.14/min [1540000], rate=54706.93/min [1550000], rate=54867.26/min [1560000], rate=54994.12/min -building interval tree based on /tmp/nxf.0ieyki3J3l/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.07 min). -mapping reads to genes [10000], rate=85714.29/min [20000], rate=92307.69/min [30000], rate=94736.84/min [40000], rate=96000.00/min [50000], rate=93750.00/min [60000], rate=92307.69/min [70000], rate=95454.55/min [80000], rate=96000.00/min [90000], rate=94736.84/min [100000], rate=95238.10/min [110000], rate=95652.17/min [120000], rate=97297.30/min [130000], rate=98734.18/min [140000], rate=100000.00/min [150000], rate=101123.60/min [160000], rate=102127.66/min [170000], rate=103030.30/min [180000], rate=100000.00/min [190000], rate=96610.17/min [200000], rate=94488.19/min [210000], rate=91304.35/min [220000], rate=89795.92/min [230000], rate=89032.26/min [240000], rate=88888.89/min [250000], rate=89285.71/min [260000], rate=89142.86/min [270000], rate=89502.76/min [280000], rate=89839.57/min [290000], rate=90625.00/min [300000], rate=90909.09/min [310000], rate=91176.47/min [320000], rate=91866.03/min [330000], rate=92957.75/min [340000], rate=94444.44/min [350000], rate=95890.41/min [360000], rate=98630.14/min [370000], rate=100000.00/min [380000], rate=101333.33/min [390000], rate=102631.58/min [400000], rate=100840.34/min [410000], rate=99193.55/min [420000], rate=97674.42/min [430000], rate=96268.66/min [440000], rate=94964.03/min [450000], rate=93750.00/min [460000], rate=92929.29/min [470000], rate=92459.02/min [480000], rate=92307.69/min [490000], rate=92163.01/min [500000], rate=91743.12/min [510000], rate=91891.89/min [520000], rate=92035.40/min [530000], rate=91907.51/min [540000], rate=92571.43/min [550000], rate=93220.34/min [560000], rate=93333.33/min [570000], rate=93698.63/min [580000], rate=93297.59/min [590000], rate=91237.11/min [600000], rate=89775.56/min [610000], rate=87980.77/min [620000], rate=86915.89/min [630000], rate=85714.29/min [640000], rate=84768.21/min [650000], rate=83511.78/min [660000], rate=82672.23/min [670000], rate=81212.12/min [680000], rate=80632.41/min [690000], rate=80077.37/min [700000], rate=79545.45/min [710000], rate=79035.25/min [720000], rate=78545.45/min [730000], rate=78074.87/min [740000], rate=77622.38/min [750000], rate=76923.08/min [760000], rate=76381.91/min [770000], rate=75986.84/min [780000], rate=75605.82/min [790000], rate=75000.00/min [800000], rate=74418.60/min [810000], rate=74198.47/min [820000], rate=73652.69/min [830000], rate=73343.15/min [840000], rate=72832.37/min [850000], rate=72443.18/min [860000], rate=72268.91/min [870000], rate=72099.45/min [880000], rate=71934.60/min [890000], rate=71774.19/min [900000], rate=71904.13/min [910000], rate=72031.66/min [920000], rate=72156.86/min [930000], rate=72279.79/min [940000], rate=72586.87/min [950000], rate=72796.93/min [960000], rate=71375.46/min [970000], rate=69534.05/min [980000], rate=68055.56/min [990000], rate=66816.65/min [1000000], rate=65789.47/min [1010000], rate=64882.23/min [1020000], rate=63949.84/min [1030000], rate=63254.86/min [1040000], rate=62400.00/min [1050000], rate=61946.90/min [1060000], rate=61330.76/min [1070000], rate=60737.94/min [1080000], rate=60447.76/min [1090000], rate=60055.10/min [1100000], rate=59728.51/min [1110000], rate=59358.29/min [1120000], rate=59102.90/min [1130000], rate=58905.30/min [1140000], rate=58965.52/min [1150000], rate=58673.47/min [1160000], rate=58635.21/min [1170000], rate=58500.00/min [1180000], rate=58367.68/min [1190000], rate=58285.71/min [1200000], rate=58299.60/min [1210000], rate=58266.45/min [1220000], rate=58280.25/min [1230000], rate=58386.08/min [1240000], rate=58444.62/min [1250000], rate=58184.64/min [1260000], rate=58333.33/min [1270000], rate=58525.35/min [1280000], rate=58715.60/min [1290000], rate=58859.32/min [1300000], rate=58956.92/min [1310000], rate=58964.74/min [1320000], rate=59016.39/min [1330000], rate=59198.81/min [1340000], rate=59074.21/min [1350000], rate=59080.96/min [1360000], rate=59216.26/min [1370000], rate=59307.36/min [1380000], rate=58023.83/min [1390000], rate=57162.44/min [1400000], rate=56000.00/min [1410000], rate=54580.65/min [1420000], rate=53618.63/min [1430000], rate=52995.68/min [1440000], rate=52331.92/min [1450000], rate=51971.33/min [1460000], rate=51773.05/min [1470000], rate=51428.57/min [1480000], rate=51034.48/min [1490000], rate=50680.27/min [1500000], rate=50391.94/min [1510000], rate=49834.98/min [1520000], rate=49538.29/min [1530000], rate=48648.65/min [1540000], rate=48099.95/min [1550000], rate=47570.33/min [1560000], rate=46964.38/min -building interval tree based on /tmp/nxf.0ieyki3J3l/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.07 min). -mapping reads to genes [10000], rate=120000.00/min [20000], rate=133333.33/min [30000], rate=138461.54/min [40000], rate=150000.00/min [50000], rate=187500.00/min [60000], rate=171428.57/min [70000], rate=168000.00/min [80000], rate=154838.71/min [90000], rate=154285.71/min [100000], rate=162162.16/min [110000], rate=169230.77/min [120000], rate=163636.36/min [130000], rate=159183.67/min [140000], rate=158490.57/min [150000], rate=160714.29/min [160000], rate=162711.86/min [170000], rate=161904.76/min [180000], rate=158823.53/min [190000], rate=160563.38/min [200000], rate=162162.16/min [210000], rate=144827.59/min [220000], rate=120000.00/min [230000], rate=105343.51/min [240000], rate=94736.84/min [250000], rate=87719.30/min [260000], rate=82105.26/min [270000], rate=77884.62/min [280000], rate=73684.21/min [290000], rate=70445.34/min [300000], rate=66666.67/min [310000], rate=63917.53/min [320000], rate=61538.46/min [330000], rate=59281.44/min [340000], rate=56983.24/min [350000], rate=55408.97/min [360000], rate=54000.00/min [370000], rate=52482.27/min [380000], rate=51351.35/min [390000], rate=50322.58/min [400000], rate=49281.31/min [410000], rate=48712.87/min [420000], rate=48000.00/min [430000], rate=47513.81/min [440000], rate=46975.09/min [450000], rate=46632.12/min [460000], rate=46308.72/min [470000], rate=46153.85/min [480000], rate=46080.00/min [490000], rate=46081.50/min [500000], rate=46153.85/min [510000], rate=45945.95/min [520000], rate=45814.98/min [530000], rate=45624.10/min [540000], rate=45569.62/min [550000], rate=45517.24/min [560000], rate=45405.41/min [570000], rate=45298.01/min [580000], rate=45312.50/min [590000], rate=45268.54/min [600000], rate=45397.23/min [610000], rate=45522.39/min [620000], rate=45644.17/min [630000], rate=45652.17/min [640000], rate=45768.77/min [650000], rate=45882.35/min [660000], rate=46046.51/min [670000], rate=46206.90/min [680000], rate=46469.25/min [690000], rate=46726.86/min [700000], rate=46979.87/min [710000], rate=47280.80/min [720000], rate=47524.75/min [730000], rate=47816.59/min [740000], rate=48104.01/min [750000], rate=48439.18/min [760000], rate=48770.05/min [770000], rate=49096.71/min [780000], rate=49419.22/min [790000], rate=49789.92/min [800000], rate=49740.93/min [810000], rate=49642.49/min [820000], rate=49546.83/min [830000], rate=49601.59/min [840000], rate=49655.17/min [850000], rate=49902.15/min [860000], rate=50097.09/min [870000], rate=50240.62/min [880000], rate=50381.68/min [890000], rate=50520.34/min [900000], rate=50704.23/min [910000], rate=50980.39/min [920000], rate=51444.55/min [930000], rate=51810.58/min [940000], rate=52222.22/min [950000], rate=52437.90/min [960000], rate=52650.82/min [970000], rate=52813.07/min [980000], rate=52972.97/min [990000], rate=53178.16/min [1000000], rate=53428.32/min [1010000], rate=53675.82/min [1020000], rate=53968.25/min [1030000], rate=54163.01/min [1040000], rate=53793.10/min [1050000], rate=52985.70/min [1060000], rate=52173.91/min [1070000], rate=51566.27/min [1080000], rate=51063.83/min [1090000], rate=50580.05/min [1100000], rate=50190.11/min [1110000], rate=49590.47/min [1120000], rate=49230.77/min [1130000], rate=49059.33/min [1140000], rate=48962.06/min [1150000], rate=48901.49/min [1160000], rate=48773.65/min [1170000], rate=48648.65/min [1180000], rate=48659.79/min [1190000], rate=48571.43/min [1200000], rate=48517.52/min [1210000], rate=48496.99/min [1220000], rate=48476.82/min [1230000], rate=48425.20/min [1240000], rate=48469.06/min [1250000], rate=48575.13/min [1260000], rate=48617.36/min [1270000], rate=48504.14/min [1280000], rate=48454.26/min [1290000], rate=48405.25/min [1300000], rate=48267.33/min [1310000], rate=48102.82/min [1320000], rate=48145.90/min [1330000], rate=48334.34/min [1340000], rate=48521.42/min [1350000], rate=48736.46/min [1360000], rate=48456.06/min [1370000], rate=48070.18/min [1380000], rate=47723.34/min [1390000], rate=47386.36/min [1400000], rate=47085.20/min [1410000], rate=46895.79/min [1420000], rate=46736.15/min [1430000], rate=46630.43/min [1440000], rate=46526.66/min [1450000], rate=46424.76/min [1460000], rate=46349.21/min [1470000], rate=46299.21/min [1480000], rate=45867.77/min [1490000], rate=45473.04/min [1500000], rate=45454.55/min [1510000], rate=45459.11/min [1520000], rate=45395.72/min [1530000], rate=45445.54/min [1540000], rate=45472.44/min [1550000], rate=45543.58/min [1560000], rate=45636.27/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads -J /tmp/nxf.0ieyki3J3l/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --genome_lib_dir /tmp/nxf.0ieyki3J3l/ctat_genome_lib_build_dir --filt_file /tmp/nxf.0ieyki3J3l/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail -M 50 > /tmp/nxf.0ieyki3J3l/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -parsing /tmp/nxf.0ieyki3J3l/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info. 0.00 reads per min processed... 12000000.00 reads per min processed... 6000000.00 reads per min processed... 4800000.00 reads per min processed... 4285714.29 reads per min processed... 4500000.00 reads per min processed... 4200000.00 reads per min processed... 4000000.00 reads per min processed... 3857142.86 reads per min processed... 4000000.00 reads per min processed... 3882352.94 reads per min processed... 3789473.68 reads per min processed... 3714285.71 reads per min processed... 3652173.91 reads per min processed... 3750000.00 reads per min processed... 3555555.56 reads per min processed... 3517241.38 reads per min processed... 3483870.97 reads per min processed... 3454545.45 reads per min processed... 3428571.43 reads per min processed... 3405405.41 reads per min processed... 3384615.38 reads per min processed... 3365853.66 reads per min processed... 3348837.21 reads per min processed... 3409090.91 reads per min processed... 3391304.35 reads per min processed... 3446808.51 reads per min processed... 3428571.43 reads per min processed... 3411764.71 reads per min processed... 3461538.46 reads per min processed... 3509433.96 reads per min processed... 3555555.56 reads per min processed... 3600000.00 reads per min processed... 3642857.14 reads per min processed... 3620689.66 reads per min processed... 3600000.00 reads per min processed... 3580645.16 reads per min processed... 3619047.62 reads per min processed... 3600000.00 reads per min processed... 3582089.55 reads per min processed... 3617647.06 reads per min processed... 3600000.00 reads per min processed... 3583333.33 reads per min processed... 3567567.57 reads per min processed... 3552631.58 reads per min processed... 3584415.58 reads per min processed... 3569620.25 reads per min processed... 3555555.56 reads per min processed... 3542168.67 reads per min processed... 3571428.57 reads per min processed... done. * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict -J /tmp/nxf.0ieyki3J3l/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -O /tmp/nxf.0ieyki3J3l/./star-fusion.preliminary/star-fusion -parsing fusion evidence: /tmp/nxf.0ieyki3J3l/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -outputting fusion candidates to file: /tmp/nxf.0ieyki3J3l/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter --fusion_preds /tmp/nxf.0ieyki3J3l/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary -J /tmp/nxf.0ieyki3J3l/659_bGc-T1-TRNA-1_B23WHTKLT4_1.Chimeric.out.junction --tmpdir /tmp --min_junction_reads 0 --min_sum_frags 1 --require_LDAS 0 --max_promiscuity 10 --min_pct_dom_promiscuity 20 --min_novel_junction_support 1 --min_alt_pct_junction 10 --aggregate_novel_junction_dist 5 --min_spanning_frags_only 1 --genome_lib_dir /tmp/nxf.0ieyki3J3l/ctat_genome_lib_build_dir --out_prefix /tmp/nxf.0ieyki3J3l/./star-fusion.preliminary/star-fusion CMD: mkdir -p /tmp/nxf.0ieyki3J3l/./star-fusion.preliminary/star-fusion.filter.intermediates_dir EM: Starting log likelihood: -193441.133010 EM: Round [1] log likelihood: -193341.245178 EM: Round [2] log likelihood: -193305.357693 EM: Round [3] log likelihood: -193288.263788 EM: Round [4] log likelihood: -193279.072936 EM: Round [5] log likelihood: -193273.792033 EM: Round [6] log likelihood: -193270.598900 EM: Round [7] log likelihood: -193268.571194 EM: Round [8] log likelihood: -193267.219414 EM: Round [9] log likelihood: -193266.275395 EM: Round [10] log likelihood: -193265.587551 EM: Round [11] log likelihood: -193265.067254 EM: Round [12] log likelihood: -193264.660825 EM: Round [13] log likelihood: -193264.334569 EM: Round [14] log likelihood: -193264.066593 EM: Round [15] log likelihood: -193263.842197 EM: Round [16] log likelihood: -193263.651213 EM: Round [17] log likelihood: -193263.486411 EM: Round [18] log likelihood: -193263.342524 EM: Round [19] log likelihood: -193263.215633 EM: Round [20] log likelihood: -193263.102765 EM: Round [21] log likelihood: -193263.001623 EM: Round [22] log likelihood: -193262.910406 EM: Round [23] log likelihood: -193262.827680 EM: Round [24] log likelihood: -193262.752291 EM: Round [25] log likelihood: -193262.683294 EM: Round [26] log likelihood: -193262.619910 EM: Round [27] log likelihood: -193262.561491 EM: Round [28] log likelihood: -193262.507488 EM: Round [29] log likelihood: -193262.457436 EM: Round [30] log likelihood: -193262.410937 EM: Round [31] log likelihood: -193262.367645 EM: Round [32] log likelihood: -193262.327262 EM: Round [33] log likelihood: -193262.289525 EM: Round [34] log likelihood: -193262.254204 EM: Round [35] log likelihood: -193262.221093 EM: Round [36] log likelihood: -193262.190012 EM: Round [37] log likelihood: -193262.160798 EM: Round [38] log likelihood: -193262.133306 EM: Round [39] log likelihood: -193262.107405 EM: Round [40] log likelihood: -193262.082976 EM: Round [41] log likelihood: -193262.059913 EM: Round [42] log likelihood: -193262.038119 EM: Round [43] log likelihood: -193262.017505 EM: Round [44] log likelihood: -193261.997990 EM: Round [45] log likelihood: -193261.979501 EM: Round [46] log likelihood: -193261.961970 EM: Round [47] log likelihood: -193261.945334 EM: Round [48] log likelihood: -193261.929538 EM: Round [49] log likelihood: -193261.914529 EM: Round [50] log likelihood: -193261.900257 EM: Round [51] log likelihood: -193261.886678 EM: Round [52] log likelihood: -193261.873752 EM: Round [53] log likelihood: -193261.861438 EM: Round [54] log likelihood: -193261.849703 EM: Round [55] log likelihood: -193261.838512 EM: Round [56] log likelihood: -193261.827836 EM: Round [57] log likelihood: -193261.817644 EM: Round [58] log likelihood: -193261.807912 EM: Round [59] log likelihood: -193261.798614 EM: Round [60] log likelihood: -193261.789727 EM: Round [61] log likelihood: -193261.781229 EM: Round [62] log likelihood: -193261.773100 EM: Round [63] log likelihood: -193261.765321 EM: Round [64] log likelihood: -193261.757874 EM: Round [65] log likelihood: -193261.750743 EM: Round [66] log likelihood: -193261.743911 EM: Round [67] log likelihood: -193261.737364 EM: Round [68] log likelihood: -193261.731089 EM: Round [69] log likelihood: -193261.725071 EM: Round [70] log likelihood: -193261.719300 EM: Round [71] log likelihood: -193261.713763 EM: Round [72] log likelihood: -193261.708449 EM: Round [73] log likelihood: -193261.703348 EM: Round [74] log likelihood: -193261.698450 EM: Round [75] log likelihood: -193261.693747 EM: Round [76] log likelihood: -193261.689228 EM: Round [77] log likelihood: -193261.684887 EM: Round [78] log likelihood: -193261.680715 EM: Round [79] log likelihood: -193261.676705 EM: Round [80] log likelihood: -193261.672849 EM: Round [81] log likelihood: -193261.669142 EM: Round [82] log likelihood: -193261.665576 EM: Round [83] log likelihood: -193261.662146 EM: Round [84] log likelihood: -193261.658846 EM: Round [85] log likelihood: -193261.655671 EM: Round [86] log likelihood: -193261.652615 EM: Round [87] log likelihood: -193261.649673 EM: Round [88] log likelihood: -193261.646841 EM: Round [89] log likelihood: -193261.644114 EM: Round [90] log likelihood: -193261.641488 EM: Round [91] log likelihood: -193261.638959 EM: Round [92] log likelihood: -193261.636523 EM: Round [93] log likelihood: -193261.634176 EM: Round [94] log likelihood: -193261.631915 EM: Round [95] log likelihood: -193261.629736 EM: Round [96] log likelihood: -193261.627636 EM: Round [97] log likelihood: -193261.625612 EM: Round [98] log likelihood: -193261.623661 EM: Round [99] log likelihood: -193261.621780 EM: Round [100] log likelihood: -193261.619966 EM: Round [101] log likelihood: -193261.618218 EM: Round [102] log likelihood: -193261.616532 EM: Round [103] log likelihood: -193261.614905 EM: Round [104] log likelihood: -193261.613337 EM: Round [105] log likelihood: -193261.611824 EM: Round [106] log likelihood: -193261.610364 EM: Round [107] log likelihood: -193261.608956 EM: Round [108] log likelihood: -193261.607597 EM: Round [109] log likelihood: -193261.606286 EM: Round [110] log likelihood: -193261.605021 EM: Round [111] log likelihood: -193261.603800 EM: Round [112] log likelihood: -193261.602622 EM: Round [113] log likelihood: -193261.601484 EM: Round [114] log likelihood: -193261.600386 EM: Round [115] log likelihood: -193261.599326 EM: Round [116] log likelihood: -193261.598303 EM: Round [117] log likelihood: -193261.597314 EM: Round [118] log likelihood: -193261.596360 EM: Round [119] log likelihood: -193261.595439 EM: Round [120] log likelihood: -193261.594549 EM: Round [121] log likelihood: -193261.593690 EM: Round [122] log likelihood: -193261.592860 EM: Round [123] log likelihood: -193261.592059 EM: Round [124] log likelihood: -193261.591284 EM: Round [125] log likelihood: -193261.590536 EM: Round [126] log likelihood: -193261.589814 EM: Round [127] log likelihood: -193261.589116 EM: Round [128] log likelihood: -193261.588441 EM: Round [129] log likelihood: -193261.587789 EM: Round [130] log likelihood: -193261.587160 EM: Round [131] log likelihood: -193261.586551 EM: Round [132] log likelihood: -193261.585963 EM: Round [133] log likelihood: -193261.585395 EM: Round [134] log likelihood: -193261.584846 EM: Round [135] log likelihood: -193261.584315 EM: Round [136] log likelihood: -193261.583802 EM: Round [137] log likelihood: -193261.583306 EM: Round [138] log likelihood: -193261.582826 EM: Round [139] log likelihood: -193261.582363 EM: Round [140] log likelihood: -193261.581915 EM: Round [141] log likelihood: -193261.581482 EM: Round [142] log likelihood: -193261.581063 EM: Round [143] log likelihood: -193261.580658 EM: Round [144] log likelihood: -193261.580266 EM: Round [145] log likelihood: -193261.579888 EM: Round [146] log likelihood: -193261.579522 EM: Round [147] log likelihood: -193261.579168 EM: Round [148] log likelihood: -193261.578825 EM: Round [149] log likelihood: -193261.578494 EM: Round [150] log likelihood: -193261.578174 EM: Round [151] log likelihood: -193261.577864 EM: Round [152] log likelihood: -193261.577565 EM: Round [153] log likelihood: -193261.577275 EM: Round [154] log likelihood: -193261.576995 EM: Round [155] log likelihood: -193261.576723 EM: Round [156] log likelihood: -193261.576461 EM: Round [157] log likelihood: -193261.576207 EM: Round [158] log likelihood: -193261.575962 EM: Round [159] log likelihood: -193261.575725 EM: Round [160] log likelihood: -193261.575495 EM: Round [161] log likelihood: -193261.575273 EM: Round [162] log likelihood: -193261.575057 EM: Round [163] log likelihood: -193261.574849 EM: Round [164] log likelihood: -193261.574648 EM: Round [165] log likelihood: -193261.574453 EM: Round [166] log likelihood: -193261.574265 EM: Round [167] log likelihood: -193261.574082 EM: Round [168] log likelihood: -193261.573905 EM: Round [169] log likelihood: -193261.573735 EM: Round [170] log likelihood: -193261.573569 EM: Round [171] log likelihood: -193261.573409 EM: Round [172] log likelihood: -193261.573254 EM: Round [173] log likelihood: -193261.573104 EM: Round [174] log likelihood: -193261.572959 EM: Round [175] log likelihood: -193261.572819 EM: Round [176] log likelihood: -193261.572683 EM: Round [177] log likelihood: -193261.572551 EM: Round [178] log likelihood: -193261.572424 EM: Round [179] log likelihood: -193261.572300 EM: Round [180] log likelihood: -193261.572181 EM: Round [181] log likelihood: -193261.572065 EM: Round [182] log likelihood: -193261.571953 EM: Round [183] log likelihood: -193261.571845 EM: Round [184] log likelihood: -193261.571740 EM: Round [185] log likelihood: -193261.571638 EM: Round [186] log likelihood: -193261.571540 EM: Stopping iterations at round 186 due to insufficient improvement in likelihood. EM: Starting log likelihood: -193093.473434 EM: Round [1] log likelihood: -193009.586194 EM: Round [2] log likelihood: -192979.983284 EM: Round [3] log likelihood: -192966.254784 EM: Round [4] log likelihood: -192959.054884 EM: Round [5] log likelihood: -192954.994498 EM: Round [6] log likelihood: -192952.575913 EM: Round [7] log likelihood: -192951.062034 EM: Round [8] log likelihood: -192950.067921 EM: Round [9] log likelihood: -192949.384448 EM: Round [10] log likelihood: -192948.894103 EM: Round [11] log likelihood: -192948.528629 EM: Round [12] log likelihood: -192948.247014 EM: Round [13] log likelihood: -192948.023759 EM: Round [14] log likelihood: -192947.842459 EM: Round [15] log likelihood: -192947.692217 EM: Round [16] log likelihood: -192947.565563 EM: Round [17] log likelihood: -192947.457237 EM: Round [18] log likelihood: -192947.363439 EM: Round [19] log likelihood: -192947.281359 EM: Round [20] log likelihood: -192947.208880 EM: Round [21] log likelihood: -192947.144377 EM: Round [22] log likelihood: -192947.086580 EM: Round [23] log likelihood: -192947.034484 EM: Round [24] log likelihood: -192946.987283 EM: Round [25] log likelihood: -192946.944320 EM: Round [26] log likelihood: -192946.905056 EM: Round [27] log likelihood: -192946.869042 EM: Round [28] log likelihood: -192946.835901 EM: Round [29] log likelihood: -192946.805315 EM: Round [30] log likelihood: -192946.777013 EM: Round [31] log likelihood: -192946.750759 EM: Round [32] log likelihood: -192946.726351 EM: Round [33] log likelihood: -192946.703612 EM: Round [34] log likelihood: -192946.682389 EM: Round [35] log likelihood: -192946.662544 EM: Round [36] log likelihood: -192946.643958 EM: Round [37] log likelihood: -192946.626523 EM: Round [38] log likelihood: -192946.610143 EM: Round [39] log likelihood: -192946.594734 EM: Round [40] log likelihood: -192946.580218 EM: Round [41] log likelihood: -192946.566527 EM: Round [42] log likelihood: -192946.553598 EM: Round [43] log likelihood: -192946.541375 EM: Round [44] log likelihood: -192946.529806 EM: Round [45] log likelihood: -192946.518846 EM: Round [46] log likelihood: -192946.508452 EM: Round [47] log likelihood: -192946.498584 EM: Round [48] log likelihood: -192946.489209 EM: Round [49] log likelihood: -192946.480293 EM: Round [50] log likelihood: -192946.471807 EM: Round [51] log likelihood: -192946.463724 EM: Round [52] log likelihood: -192946.456018 EM: Round [53] log likelihood: -192946.448667 EM: Round [54] log likelihood: -192946.441649 EM: Round [55] log likelihood: -192946.434945 EM: Round [56] log likelihood: -192946.428536 EM: Round [57] log likelihood: -192946.422405 EM: Round [58] log likelihood: -192946.416538 EM: Round [59] log likelihood: -192946.410919 EM: Round [60] log likelihood: -192946.405536 EM: Round [61] log likelihood: -192946.400375 EM: Round [62] log likelihood: -192946.395424 EM: Round [63] log likelihood: -192946.390674 EM: Round [64] log likelihood: -192946.386114 EM: Round [65] log likelihood: -192946.381733 EM: Round [66] log likelihood: -192946.377525 EM: Round [67] log likelihood: -192946.373479 EM: Round [68] log likelihood: -192946.369589 EM: Round [69] log likelihood: -192946.365847 EM: Round [70] log likelihood: -192946.362246 EM: Round [71] log likelihood: -192946.358780 EM: Round [72] log likelihood: -192946.355442 EM: Round [73] log likelihood: -192946.352227 EM: Round [74] log likelihood: -192946.349129 EM: Round [75] log likelihood: -192946.346144 EM: Round [76] log likelihood: -192946.343266 EM: Round [77] log likelihood: -192946.340492 EM: Round [78] log likelihood: -192946.337815 EM: Round [79] log likelihood: -192946.335234 EM: Round [80] log likelihood: -192946.332743 EM: Round [81] log likelihood: -192946.330338 EM: Round [82] log likelihood: -192946.328018 EM: Round [83] log likelihood: -192946.325777 EM: Round [84] log likelihood: -192946.323613 EM: Round [85] log likelihood: -192946.321524 EM: Round [86] log likelihood: -192946.319505 EM: Round [87] log likelihood: -192946.317555 EM: Round [88] log likelihood: -192946.315670 EM: Round [89] log likelihood: -192946.313849 EM: Round [90] log likelihood: -192946.312089 EM: Round [91] log likelihood: -192946.310387 EM: Round [92] log likelihood: -192946.308742 EM: Round [93] log likelihood: -192946.307151 EM: Round [94] log likelihood: -192946.305612 EM: Round [95] log likelihood: -192946.304124 EM: Round [96] log likelihood: -192946.302685 EM: Round [97] log likelihood: -192946.301293 EM: Round [98] log likelihood: -192946.299946 EM: Round [99] log likelihood: -192946.298643 EM: Round [100] log likelihood: -192946.297382 EM: Round [101] log likelihood: -192946.296162 EM: Round [102] log likelihood: -192946.294981 EM: Round [103] log likelihood: -192946.293838 EM: Round [104] log likelihood: -192946.292731 EM: Round [105] log likelihood: -192946.291660 EM: Round [106] log likelihood: -192946.290623 EM: Round [107] log likelihood: -192946.289619 EM: Round [108] log likelihood: -192946.288647 EM: Round [109] log likelihood: -192946.287706 EM: Round [110] log likelihood: -192946.286795 EM: Round [111] log likelihood: -192946.285912 EM: Round [112] log likelihood: -192946.285058 EM: Round [113] log likelihood: -192946.284230 EM: Round [114] log likelihood: -192946.283428 EM: Round [115] log likelihood: -192946.282652 EM: Round [116] log likelihood: -192946.281899 EM: Round [117] log likelihood: -192946.281171 EM: Round [118] log likelihood: -192946.280465 EM: Round [119] log likelihood: -192946.279781 EM: Round [120] log likelihood: -192946.279118 EM: Round [121] log likelihood: -192946.278476 EM: Round [122] log likelihood: -192946.277854 EM: Round [123] log likelihood: -192946.277252 EM: Round [124] log likelihood: -192946.276668 EM: Round [125] log likelihood: -192946.276102 EM: Round [126] log likelihood: -192946.275554 EM: Round [127] log likelihood: -192946.275022 EM: Round [128] log likelihood: -192946.274508 EM: Round [129] log likelihood: -192946.274009 EM: Round [130] log likelihood: -192946.273525 EM: Round [131] log likelihood: -192946.273056 EM: Round [132] log likelihood: -192946.272602 EM: Round [133] log likelihood: -192946.272162 EM: Round [134] log likelihood: -192946.271735 EM: Round [135] log likelihood: -192946.271321 EM: Round [136] log likelihood: -192946.270920 EM: Round [137] log likelihood: -192946.270532 EM: Round [138] log likelihood: -192946.270155 EM: Round [139] log likelihood: -192946.269790 EM: Round [140] log likelihood: -192946.269436 EM: Round [141] log likelihood: -192946.269093 EM: Round [142] log likelihood: -192946.268760 EM: Round [143] log likelihood: -192946.268437 EM: Round [144] log likelihood: -192946.268125 EM: Round [145] log likelihood: -192946.267822 EM: Round [146] log likelihood: -192946.267528 EM: Round [147] log likelihood: -192946.267243 EM: Round [148] log likelihood: -192946.266967 EM: Round [149] log likelihood: -192946.266699 EM: Round [150] log likelihood: -192946.266439 EM: Round [151] log likelihood: -192946.266187 EM: Round [152] log likelihood: -192946.265943 EM: Round [153] log likelihood: -192946.265707 EM: Round [154] log likelihood: -192946.265477 EM: Round [155] log likelihood: -192946.265255 EM: Round [156] log likelihood: -192946.265039 EM: Round [157] log likelihood: -192946.264830 EM: Round [158] log likelihood: -192946.264627 EM: Round [159] log likelihood: -192946.264430 EM: Round [160] log likelihood: -192946.264239 EM: Round [161] log likelihood: -192946.264054 EM: Round [162] log likelihood: -192946.263875 EM: Round [163] log likelihood: -192946.263701 EM: Round [164] log likelihood: -192946.263533 EM: Round [165] log likelihood: -192946.263369 EM: Round [166] log likelihood: -192946.263210 EM: Round [167] log likelihood: -192946.263057 EM: Round [168] log likelihood: -192946.262908 EM: Round [169] log likelihood: -192946.262763 EM: Round [170] log likelihood: -192946.262623 EM: Round [171] log likelihood: -192946.262487 EM: Round [172] log likelihood: -192946.262355 EM: Round [173] log likelihood: -192946.262227 EM: Round [174] log likelihood: -192946.262103 EM: Round [175] log likelihood: -192946.261983 EM: Round [176] log likelihood: -192946.261866 EM: Round [177] log likelihood: -192946.261753 EM: Round [178] log likelihood: -192946.261643 EM: Round [179] log likelihood: -192946.261537 EM: Round [180] log likelihood: -192946.261433 EM: Round [181] log likelihood: -192946.261333 EM: Round [182] log likelihood: -192946.261236 EM: Stopping iterations at round 182 due to insufficient improvement in likelihood. CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.0ieyki3J3l/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20 --fusion_preds /tmp/nxf.0ieyki3J3l/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.0ieyki3J3l/ctat_genome_lib_build_dir CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.0ieyki3J3l/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.0ieyki3J3l/ctat_genome_lib_build_dir CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.0ieyki3J3l/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter --genome_lib_dir /tmp/nxf.0ieyki3J3l/ctat_genome_lib_build_dir --max_promiscuity 10 --min_pct_dom_promiscuity 20 CMD: cp /tmp/nxf.0ieyki3J3l/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.0ieyki3J3l/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.0ieyki3J3l/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.0ieyki3J3l/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged CMD: ln -sf /tmp/nxf.0ieyki3J3l/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.0ieyki3J3l/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered * Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.0ieyki3J3l/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 190989666 > /tmp/nxf.0ieyki3J3l/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM * Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.0ieyki3J3l/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.0ieyki3J3l/ctat_genome_lib_build_dir > /tmp/nxf.0ieyki3J3l/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo * Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.0ieyki3J3l/ctat_genome_lib_build_dir --annotate /tmp/nxf.0ieyki3J3l/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.0ieyki3J3l/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot * Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.0ieyki3J3l/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.0ieyki3J3l/ctat_genome_lib_build_dir -done, see /tmp/nxf.0ieyki3J3l/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass * Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.0ieyki3J3l/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.0ieyki3J3l/ctat_genome_lib_build_dir -filter_likely_RT_artifacts: (pass: 2029, filtered: 10349) * Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.0ieyki3J3l/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001 * Running CMD: cp /tmp/nxf.0ieyki3J3l/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv * Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv * Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.0ieyki3J3l/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [ENSG00000180747.15] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [ENSG00000239268.3] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [ENSG00000226049.3] WARNING, no entry stored in dbm for [ENSG00000260404.3] WARNING, no entry stored in dbm for [ENSG00000280136.2] WARNING, no entry stored in dbm for [ENSG00000225292.2] WARNING, no entry stored in dbm for [ENSG00000227681.5] WARNING, no entry stored in dbm for [ENSG00000224533.4] WARNING, no entry stored in dbm for [ENSG00000272140.2] WARNING, no entry stored in dbm for [ENSG00000203413.3] WARNING, no entry stored in dbm for [ENSG00000244479.7] WARNING, no entry stored in dbm for [ENSG00000204959.4] WARNING, no entry stored in dbm for [ENSG00000229739.4] WARNING, no entry stored in dbm for [ENSG00000172965.17] WARNING, no entry stored in dbm for [ENSG00000204745.4] WARNING, no entry stored in dbm for [ENSG00000215483.11] WARNING, no entry stored in dbm for [ENSG00000244198.7] WARNING, no entry stored in dbm for [ENSG00000230490.3] WARNING, no entry stored in dbm for [ENSG00000261143.1] WARNING, no entry stored in dbm for [ENSG00000229930.1] WARNING, no entry stored in dbm for [ENSG00000272848.2] WARNING, no entry stored in dbm for [ENSG00000128438.10] WARNING, no entry stored in dbm for [ENSG00000280195.1] WARNING, no entry stored in dbm for [ENSG00000236741.4] WARNING, no entry stored in dbm for [ENSG00000270571.2] WARNING, no entry stored in dbm for [ENSG00000228546.2] WARNING, no entry stored in dbm for [ENSG00000250778.1] WARNING, no entry stored in dbm for [ENSG00000231607.13] WARNING, no entry stored in dbm for [ENSG00000236051.7] WARNING, no entry stored in dbm for [ENSG00000236833.1] WARNING, no entry stored in dbm for [ENSG00000214955.5] WARNING, no entry stored in dbm for [ENSG00000232527.8] WARNING, no entry stored in dbm for [ENSG00000272779.1] WARNING, no entry stored in dbm for [ENSG00000230023.2] WARNING, no entry stored in dbm for [ENSG00000248238.2] WARNING, no entry stored in dbm for [ENSG00000257906.3] WARNING, no entry stored in dbm for [ENSG00000254101.7] WARNING, no entry stored in dbm for [ENSG00000279579.3] WARNING, no entry stored in dbm for [ENSG00000203356.2] WARNING, no entry stored in dbm for [ENSG00000224699.9] WARNING, no entry stored in dbm for [ENSG00000239569.3] WARNING, no entry stored in dbm for [ENSG00000215483.11] WARNING, no entry stored in dbm for [ENSG00000280136.2] WARNING, no entry stored in dbm for [ENSG00000225393.1] WARNING, no entry stored in dbm for [ENSG00000205534.6] WARNING, no entry stored in dbm for [ENSG00000244701.1] WARNING, no entry stored in dbm for [ENSG00000258656.1] WARNING, no entry stored in dbm for [ENSG00000214195.4] WARNING, no entry stored in dbm for [ENSG00000277425.1] WARNING, no entry stored in dbm for [ENSG00000226310.1] WARNING, no entry stored in dbm for [ENSG00000215022.7] WARNING, no entry stored in dbm for [ENSG00000285062.1] WARNING, no entry stored in dbm for [ENSG00000223779.6] WARNING, no entry stored in dbm for [ENSG00000278212.2] WARNING, no entry stored in dbm for [ENSG00000251616.1] WARNING, no entry stored in dbm for [ENSG00000288620.1] WARNING, no entry stored in dbm for [ENSG00000248126.1] WARNING, no entry stored in dbm for [ENSG00000287858.1] WARNING, no entry stored in dbm for [ENSG00000276548.1] WARNING, no entry stored in dbm for [ENSG00000189149.12] WARNING, no entry stored in dbm for [ENSG00000259380.6] WARNING, no entry stored in dbm for [ENSG00000219665.8] WARNING, no entry stored in dbm for [ENSG00000254363.6] WARNING, no entry stored in dbm for [ENSG00000196566.2] WARNING, no entry stored in dbm for [ENSG00000285954.1] WARNING, no entry stored in dbm for [ENSG00000223403.6] WARNING, no entry stored in dbm for [ENSG00000223470.3] WARNING, no entry stored in dbm for [ENSG00000236869.1] WARNING, no entry stored in dbm for [ENSG00000111788.10] WARNING, no entry stored in dbm for [ENSG00000250802.7] WARNING, no entry stored in dbm for [ENSG00000250802.7] WARNING, no entry stored in dbm for [ENSG00000250802.7] WARNING, no entry stored in dbm for [ENSG00000279927.1] WARNING, no entry stored in dbm for [ENSG00000262445.3] WARNING, no entry stored in dbm for [ENSG00000185596.16] WARNING, no entry stored in dbm for [ENSG00000225292.2] WARNING, no entry stored in dbm for [ENSG00000214976.2] WARNING, no entry stored in dbm for [ENSG00000254205.1] WARNING, no entry stored in dbm for [ENSG00000213862.4] WARNING, no entry stored in dbm for [ENSG00000127957.18] WARNING, no entry stored in dbm for [ENSG00000197320.5] WARNING, no entry stored in dbm for [ENSG00000237298.10] WARNING, no entry stored in dbm for [ENSG00000225574.1] WARNING, no entry stored in dbm for [ENSG00000235782.1] WARNING, no entry stored in dbm for [ENSG00000205583.13] WARNING, no entry stored in dbm for [ENSG00000184106.8] WARNING, no entry stored in dbm for [ENSG00000203739.4] WARNING, no entry stored in dbm for [ENSG00000212694.8] WARNING, no entry stored in dbm for [ENSG00000288028.1] WARNING, no entry stored in dbm for [ENSG00000241163.8] WARNING, no entry stored in dbm for [ENSG00000225401.2] WARNING, no entry stored in dbm for [ENSG00000263327.6] WARNING, no entry stored in dbm for [ENSG00000241316.8] WARNING, no entry stored in dbm for [ENSG00000231367.6] WARNING, no entry stored in dbm for [ENSG00000271461.1] WARNING, no entry stored in dbm for [ENSG00000254607.2] WARNING, no entry stored in dbm for [ENSG00000249700.9] WARNING, no entry stored in dbm for [ENSG00000261183.5] WARNING, no entry stored in dbm for [ENSG00000234663.7] WARNING, no entry stored in dbm for [ENSG00000279584.1] WARNING, no entry stored in dbm for [ENSG00000158482.10] WARNING, no entry stored in dbm for [ENSG00000276721.1] WARNING, no entry stored in dbm for [ENSG00000280441.3] WARNING, no entry stored in dbm for [ENSG00000280441.3] WARNING, no entry stored in dbm for [ENSG00000175061.18] WARNING, no entry stored in dbm for [ENSG00000258186.2] WARNING, no entry stored in dbm for [ENSG00000279583.1] WARNING, no entry stored in dbm for [ENSG00000260727.2] WARNING, no entry stored in dbm for [ENSG00000237296.9] WARNING, no entry stored in dbm for [ENSG00000285051.2] WARNING, no entry stored in dbm for [ENSG00000231240.1] WARNING, no entry stored in dbm for [ENSG00000269609.6] WARNING, no entry stored in dbm for [ENSG00000270195.2] WARNING, no entry stored in dbm for [ENSG00000223908.5] WARNING, no entry stored in dbm for [ENSG00000283709.1] WARNING, no entry stored in dbm for [ENSG00000260805.2] WARNING, no entry stored in dbm for [ENSG00000224184.6] WARNING, no entry stored in dbm for [ENSG00000215067.10] WARNING, no entry stored in dbm for [ENSG00000270330.1] WARNING, no entry stored in dbm for [ENSG00000234297.2] WARNING, no entry stored in dbm for [ENSG00000228463.10] WARNING, no entry stored in dbm for [ENSG00000228463.10] WARNING, no entry stored in dbm for [ENSG00000276805.2] WARNING, no entry stored in dbm for [ENSG00000287411.1] WARNING, no entry stored in dbm for [ENSG00000281501.1] WARNING, no entry stored in dbm for [ENSG00000175611.12] WARNING, no entry stored in dbm for [ENSG00000230116.1] WARNING, no entry stored in dbm for [ENSG00000230116.1] WARNING, no entry stored in dbm for [ENSG00000237294.1] WARNING, no entry stored in dbm for [ENSG00000232965.1] WARNING, no entry stored in dbm for [ENSG00000237478.2] WARNING, no entry stored in dbm for [ENSG00000223508.5] WARNING, no entry stored in dbm for [ENSG00000230559.1] WARNING, no entry stored in dbm for [ENSG00000256035.1] WARNING, no entry stored in dbm for [ENSG00000207260.1] WARNING, no entry stored in dbm for [ENSG00000206975.1] WARNING, no entry stored in dbm for [ENSG00000200795.1] WARNING, no entry stored in dbm for [ENSG00000224318.6] WARNING, no entry stored in dbm for [ENSG00000239899.3] WARNING, no entry stored in dbm for [ENSG00000240869.3] WARNING, no entry stored in dbm for [ENSG00000225944.1] WARNING, no entry stored in dbm for [ENSG00000236948.2] WARNING, no entry stored in dbm for [ENSG00000254109.6] WARNING, no entry stored in dbm for [ENSG00000278147.1] WARNING, no entry stored in dbm for [ENSG00000285230.2] WARNING, no entry stored in dbm for [ENSG00000177410.13] WARNING, no entry stored in dbm for [ENSG00000179571.10] WARNING, no entry stored in dbm for [ENSG00000273125.2] WARNING, no entry stored in dbm for [ENSG00000226419.8] WARNING, no entry stored in dbm for [ENSG00000257557.2] WARNING, no entry stored in dbm for [ENSG00000234996.4] WARNING, no entry stored in dbm for [ENSG00000248441.7] WARNING, no entry stored in dbm for [ENSG00000217094.2] WARNING, no entry stored in dbm for [ENSG00000205578.6] WARNING, no entry stored in dbm for [ENSG00000205485.13] WARNING, no entry stored in dbm for [ENSG00000272655.2] WARNING, no entry stored in dbm for [ENSG00000187953.10] WARNING, no entry stored in dbm for [ENSG00000237094.12] WARNING, no entry stored in dbm for [ENSG00000237094.12] WARNING, no entry stored in dbm for [ENSG00000239906.1] WARNING, no entry stored in dbm for [ENSG00000279738.1] WARNING, no entry stored in dbm for [ENSG00000228999.4] WARNING, no entry stored in dbm for [ENSG00000228759.1] WARNING, no entry stored in dbm for [ENSG00000161103.11] WARNING, no entry stored in dbm for [ENSG00000273851.1] WARNING, no entry stored in dbm for [ENSG00000224429.8] WARNING, no entry stored in dbm for [ENSG00000272140.2] WARNING, no entry stored in dbm for [ENSG00000250562.1] WARNING, no entry stored in dbm for [ENSG00000245750.10] WARNING, no entry stored in dbm for [ENSG00000280828.1] WARNING, no entry stored in dbm for [ENSG00000233621.2] WARNING, no entry stored in dbm for [ENSG00000277053.4] WARNING, no entry stored in dbm for [ENSG00000247774.7] WARNING, no entry stored in dbm for [ENSG00000279208.1] WARNING, no entry stored in dbm for [ENSG00000224881.1] WARNING, no entry stored in dbm for [ENSG00000275374.1] WARNING, no entry stored in dbm for [ENSG00000288694.1] WARNING, no entry stored in dbm for [ENSG00000223891.6] WARNING, no entry stored in dbm for [ENSG00000232490.6] WARNING, no entry stored in dbm for [ENSG00000258853.1] WARNING, no entry stored in dbm for [ENSG00000258853.1] WARNING, no entry stored in dbm for [ENSG00000188002.10] WARNING, no entry stored in dbm for [ENSG00000226015.2] WARNING, no entry stored in dbm for [ENSG00000149531.15] WARNING, no entry stored in dbm for [ENSG00000229415.10] WARNING, no entry stored in dbm for [ENSG00000249171.1] WARNING, no entry stored in dbm for [ENSG00000281649.2] WARNING, no entry stored in dbm for [ENSG00000214544.7] WARNING, no entry stored in dbm for [ENSG00000228526.7] WARNING, no entry stored in dbm for [ENSG00000206593.1] WARNING, no entry stored in dbm for [ENSG00000205583.13] WARNING, no entry stored in dbm for [ENSG00000228065.11] WARNING, no entry stored in dbm for [ENSG00000224020.1] WARNING, no entry stored in dbm for [ENSG00000279738.1] WARNING, no entry stored in dbm for [ENSG00000196312.15] WARNING, no entry stored in dbm for [ENSG00000196312.15] WARNING, no entry stored in dbm for [ENSG00000228109.1] WARNING, no entry stored in dbm for [ENSG00000286618.1] WARNING, no entry stored in dbm for [ENSG00000287826.1] WARNING, no entry stored in dbm for [ENSG00000286045.1] WARNING, no entry stored in dbm for [ENSG00000235890.2] WARNING, no entry stored in dbm for [ENSG00000234145.1] WARNING, no entry stored in dbm for [ENSG00000237943.7] WARNING, no entry stored in dbm for [ENSG00000093100.13] WARNING, no entry stored in dbm for [ENSG00000214553.10] WARNING, no entry stored in dbm for [ENSG00000247675.7] WARNING, no entry stored in dbm for [ENSG00000218418.2] WARNING, no entry stored in dbm for [ENSG00000231246.2] WARNING, no entry stored in dbm for [ENSG00000175779.4] WARNING, no entry stored in dbm for [ENSG00000251129.2] WARNING, no entry stored in dbm for [ENSG00000275294.4] WARNING, no entry stored in dbm for [ENSG00000261122.6] WARNING, no entry stored in dbm for [ENSG00000220804.8] WARNING, no entry stored in dbm for [ENSG00000227403.2] WARNING, no entry stored in dbm for [ENSG00000279579.3] WARNING, no entry stored in dbm for [ENSG00000281912.1] WARNING, no entry stored in dbm for [ENSG00000228794.10] WARNING, no entry stored in dbm for [ENSG00000282508.2] WARNING, no entry stored in dbm for [ENSG00000282508.2] WARNING, no entry stored in dbm for [ENSG00000225269.3] WARNING, no entry stored in dbm for [ENSG00000246662.6] WARNING, no entry stored in dbm for [ENSG00000227036.8] WARNING, no entry stored in dbm for [ENSG00000153363.13] WARNING, no entry stored in dbm for [ENSG00000224209.8] WARNING, no entry stored in dbm for [ENSG00000229437.2] WARNING, no entry stored in dbm for [ENSG00000231028.9] WARNING, no entry stored in dbm for [ENSG00000245148.2] WARNING, no entry stored in dbm for [ENSG00000276758.1] WARNING, no entry stored in dbm for [ENSG00000200434.1] WARNING, no entry stored in dbm for [ENSG00000229320.3] WARNING, no entry stored in dbm for [ENSG00000228309.7] WARNING, no entry stored in dbm for [ENSG00000239715.1] WARNING, no entry stored in dbm for [ENSG00000269937.1] WARNING, no entry stored in dbm for [ENSG00000241860.7] WARNING, no entry stored in dbm for [ENSG00000268879.1] WARNING, no entry stored in dbm for [ENSG00000258804.1] WARNING, no entry stored in dbm for [ENSG00000229931.1] WARNING, no entry stored in dbm for [ENSG00000283122.1] WARNING, no entry stored in dbm for [ENSG00000285219.2] WARNING, no entry stored in dbm for [ENSG00000185485.14] WARNING, no entry stored in dbm for [ENSG00000235499.1] WARNING, no entry stored in dbm for [ENSG00000282572.2] WARNING, no entry stored in dbm for [ENSG00000231711.2] WARNING, no entry stored in dbm for [ENSG00000206341.7] WARNING, no entry stored in dbm for [ENSG00000206341.7] WARNING, no entry stored in dbm for [ENSG00000206341.7] WARNING, no entry stored in dbm for [ENSG00000196301.3] WARNING, no entry stored in dbm for [ENSG00000276509.1] WARNING, no entry stored in dbm for [ENSG00000260644.6] WARNING, no entry stored in dbm for [ENSG00000276550.4] WARNING, no entry stored in dbm for [ENSG00000267555.1] WARNING, no entry stored in dbm for [ENSG00000255295.1] WARNING, no entry stored in dbm for [ENSG00000220875.1] WARNING, no entry stored in dbm for [ENSG00000265541.1] WARNING, no entry stored in dbm for [ENSG00000237224.4] WARNING, no entry stored in dbm for [ENSG00000241549.8] WARNING, no entry stored in dbm for [ENSG00000232354.8] WARNING, no entry stored in dbm for [ENSG00000228393.4] WARNING, no entry stored in dbm for [ENSG00000229212.8] WARNING, no entry stored in dbm for [ENSG00000255769.7] WARNING, no entry stored in dbm for [ENSG00000240489.1] WARNING, no entry stored in dbm for [ENSG00000168405.17] WARNING, no entry stored in dbm for [ENSG00000286563.1] WARNING, no entry stored in dbm for [ENSG00000236682.2] WARNING, no entry stored in dbm for [ENSG00000205853.12] WARNING, no entry stored in dbm for [ENSG00000258240.6] WARNING, no entry stored in dbm for [ENSG00000264765.1] WARNING, no entry stored in dbm for [ENSG00000237238.3] WARNING, no entry stored in dbm for [ENSG00000244879.8] WARNING, no entry stored in dbm for [ENSG00000225022.1] WARNING, no entry stored in dbm for [ENSG00000230590.11] WARNING, no entry stored in dbm for [ENSG00000231646.6] WARNING, no entry stored in dbm for [ENSG00000287129.1] WARNING, no entry stored in dbm for [ENSG00000279431.1] WARNING, no entry stored in dbm for [ENSG00000237480.3] WARNING, no entry stored in dbm for [ENSG00000279891.1] WARNING, no entry stored in dbm for [ENSG00000224885.1] WARNING, no entry stored in dbm for [ENSG00000204352.4] WARNING, no entry stored in dbm for [ENSG00000259087.5] WARNING, no entry stored in dbm for [ENSG00000244383.2] WARNING, no entry stored in dbm for [ENSG00000272779.1] WARNING, no entry stored in dbm for [ENSG00000284195.1] WARNING, no entry stored in dbm for [ENSG00000204603.7] WARNING, no entry stored in dbm for [ENSG00000260121.1] WARNING, no entry stored in dbm for [ENSG00000185684.15] WARNING, no entry stored in dbm for [ENSG00000258778.2] WARNING, no entry stored in dbm for [ENSG00000254285.3] WARNING, no entry stored in dbm for [ENSG00000206120.11] WARNING, no entry stored in dbm for [ENSG00000267506.5] WARNING, no entry stored in dbm for [ENSG00000183929.7] WARNING, no entry stored in dbm for [ENSG00000117242.7] WARNING, no entry stored in dbm for [ENSG00000211459.2] WARNING, no entry stored in dbm for [ENSG00000218175.2] WARNING, no entry stored in dbm for [ENSG00000254101.7] WARNING, no entry stored in dbm for [ENSG00000213888.3] WARNING, no entry stored in dbm for [ENSG00000261963.3] WARNING, no entry stored in dbm for [ENSG00000279660.1] WARNING, no entry stored in dbm for [ENSG00000250858.1] WARNING, no entry stored in dbm for [ENSG00000177337.8] WARNING, no entry stored in dbm for [ENSG00000225588.2] WARNING, no entry stored in dbm for [ENSG00000259280.1] WARNING, no entry stored in dbm for [ENSG00000260148.1] WARNING, no entry stored in dbm for [ENSG00000255220.1] WARNING, no entry stored in dbm for [ENSG00000259134.7] WARNING, no entry stored in dbm for [ENSG00000251553.1] WARNING, no entry stored in dbm for [ENSG00000229180.7] WARNING, no entry stored in dbm for [ENSG00000236172.7] WARNING, no entry stored in dbm for [ENSG00000286458.1] WARNING, no entry stored in dbm for [ENSG00000220506.2] WARNING, no entry stored in dbm for [ENSG00000230630.5] WARNING, no entry stored in dbm for [ENSG00000259408.2] WARNING, no entry stored in dbm for [ENSG00000286482.1] WARNING, no entry stored in dbm for [ENSG00000224533.4] WARNING, no entry stored in dbm for [ENSG00000225393.1] WARNING, no entry stored in dbm for [ENSG00000201098.1] WARNING, no entry stored in dbm for [ENSG00000243389.1] WARNING, no entry stored in dbm for [ENSG00000214765.8] WARNING, no entry stored in dbm for [ENSG00000227617.9] WARNING, no entry stored in dbm for [ENSG00000237986.4] WARNING, no entry stored in dbm for [ENSG00000237296.9] WARNING, no entry stored in dbm for [ENSG00000263667.3] WARNING, no entry stored in dbm for [ENSG00000227676.4] WARNING, no entry stored in dbm for [ENSG00000236404.10] WARNING, no entry stored in dbm for [ENSG00000260372.7] WARNING, no entry stored in dbm for [ENSG00000230590.11] WARNING, no entry stored in dbm for [ENSG00000229807.12] WARNING, no entry stored in dbm for [ENSG00000239482.6] WARNING, no entry stored in dbm for [ENSG00000188511.12] WARNING, no entry stored in dbm for [ENSG00000285792.1] WARNING, no entry stored in dbm for [ENSG00000226397.8] WARNING, no entry stored in dbm for [ENSG00000254838.5] WARNING, no entry stored in dbm for [ENSG00000253281.7] WARNING, no entry stored in dbm for [ENSG00000286156.1] WARNING, no entry stored in dbm for [ENSG00000282851.2] WARNING, no entry stored in dbm for [ENSG00000280068.1] WARNING, no entry stored in dbm for [ENSG00000280828.1] WARNING, no entry stored in dbm for [ENSG00000228834.1] WARNING, no entry stored in dbm for [ENSG00000261286.1] WARNING, no entry stored in dbm for [ENSG00000197595.4] WARNING, no entry stored in dbm for [ENSG00000257252.6] WARNING, no entry stored in dbm for [ENSG00000231093.1] WARNING, no entry stored in dbm for [ENSG00000244198.7] WARNING, no entry stored in dbm for [ENSG00000205853.12] WARNING, no entry stored in dbm for [ENSG00000230359.5] WARNING, no entry stored in dbm for [ENSG00000218896.1] WARNING, no entry stored in dbm for [ENSG00000227521.2] WARNING, no entry stored in dbm for [ENSG00000220418.1] WARNING, no entry stored in dbm for [ENSG00000266373.1] WARNING, no entry stored in dbm for [ENSG00000270449.1] WARNING, no entry stored in dbm for [ENSG00000225739.1] WARNING, no entry stored in dbm for [ENSG00000255216.2] WARNING, no entry stored in dbm for [ENSG00000247137.9] WARNING, no entry stored in dbm for [ENSG00000247137.9] WARNING, no entry stored in dbm for [ENSG00000284233.1] WARNING, no entry stored in dbm for [ENSG00000269982.1] WARNING, no entry stored in dbm for [ENSG00000273295.1] WARNING, no entry stored in dbm for [ENSG00000231355.1] WARNING, no entry stored in dbm for [ENSG00000237296.9] WARNING, no entry stored in dbm for [ENSG00000217482.2] WARNING, no entry stored in dbm for [ENSG00000236375.3] WARNING, no entry stored in dbm for [ENSG00000237636.3] WARNING, no entry stored in dbm for [ENSG00000230006.7] WARNING, no entry stored in dbm for [ENSG00000230006.7] WARNING, no entry stored in dbm for [ENSG00000186481.16] WARNING, no entry stored in dbm for [ENSG00000287867.1] WARNING, no entry stored in dbm for [ENSG00000215067.10] WARNING, no entry stored in dbm for [ENSG00000286389.1] WARNING, no entry stored in dbm for [ENSG00000245275.8] WARNING, no entry stored in dbm for [ENSG00000273192.1] WARNING, no entry stored in dbm for [ENSG00000218426.5] WARNING, no entry stored in dbm for [ENSG00000266891.1] WARNING, no entry stored in dbm for [ENSG00000219867.1] WARNING, no entry stored in dbm for [ENSG00000233825.1] WARNING, no entry stored in dbm for [ENSG00000279239.1] WARNING, no entry stored in dbm for [ENSG00000235749.3] WARNING, no entry stored in dbm for [ENSG00000284882.1] WARNING, no entry stored in dbm for [ENSG00000282772.1] WARNING, no entry stored in dbm for [ENSG00000288586.1] WARNING, no entry stored in dbm for [ENSG00000279124.1] WARNING, no entry stored in dbm for [ENSG00000248503.2] WARNING, no entry stored in dbm for [ENSG00000246203.2] WARNING, no entry stored in dbm for [ENSG00000225032.5] WARNING, no entry stored in dbm for [ENSG00000258504.2] WARNING, no entry stored in dbm for [ENSG00000197670.6] WARNING, no entry stored in dbm for [ENSG00000279286.2] WARNING, no entry stored in dbm for [ENSG00000227220.1] WARNING, no entry stored in dbm for [ENSG00000286533.1] WARNING, no entry stored in dbm for [ENSG00000280184.2] WARNING, no entry stored in dbm for [ENSG00000262528.2] WARNING, no entry stored in dbm for [ENSG00000229807.12] WARNING, no entry stored in dbm for [ENSG00000272620.2] WARNING, no entry stored in dbm for [ENSG00000241684.6] WARNING, no entry stored in dbm for [ENSG00000255585.3] WARNING, no entry stored in dbm for [ENSG00000224016.2] WARNING, no entry stored in dbm for [ENSG00000224016.2] WARNING, no entry stored in dbm for [ENSG00000279796.1] WARNING, no entry stored in dbm for [ENSG00000279047.4] WARNING, no entry stored in dbm for [ENSG00000284964.1] WARNING, no entry stored in dbm for [ENSG00000261499.2] WARNING, no entry stored in dbm for [ENSG00000275121.1] WARNING, no entry stored in dbm for [ENSG00000277125.1] WARNING, no entry stored in dbm for [ENSG00000246596.7] WARNING, no entry stored in dbm for [ENSG00000218227.3] WARNING, no entry stored in dbm for [ENSG00000240424.2] WARNING, no entry stored in dbm for [ENSG00000250999.2] WARNING, no entry stored in dbm for [ENSG00000278212.2] WARNING, no entry stored in dbm for [ENSG00000278212.2] WARNING, no entry stored in dbm for [ENSG00000214135.8] WARNING, no entry stored in dbm for [ENSG00000283345.1] WARNING, no entry stored in dbm for [ENSG00000215302.8] WARNING, no entry stored in dbm for [ENSG00000280020.1] WARNING, no entry stored in dbm for [ENSG00000235421.1] WARNING, no entry stored in dbm for [ENSG00000248376.2] WARNING, no entry stored in dbm for [ENSG00000214773.1] WARNING, no entry stored in dbm for [ENSG00000260404.3] WARNING, no entry stored in dbm for [ENSG00000280828.1] WARNING, no entry stored in dbm for [ENSG00000277332.1] WARNING, no entry stored in dbm for [ENSG00000272970.3] WARNING, no entry stored in dbm for [ENSG00000259867.6] WARNING, no entry stored in dbm for [ENSG00000250144.1] WARNING, no entry stored in dbm for [ENSG00000233133.1] WARNING, no entry stored in dbm for [ENSG00000261499.2] WARNING, no entry stored in dbm for [ENSG00000224479.6] WARNING, no entry stored in dbm for [ENSG00000249741.2] WARNING, no entry stored in dbm for [ENSG00000282057.1] WARNING, no entry stored in dbm for [ENSG00000282057.1] WARNING, no entry stored in dbm for [ENSG00000239268.3] WARNING, no entry stored in dbm for [ENSG00000268362.6] WARNING, no entry stored in dbm for [ENSG00000124097.7] WARNING, no entry stored in dbm for [ENSG00000280828.1] WARNING, no entry stored in dbm for [ENSG00000250869.2] WARNING, no entry stored in dbm for [ENSG00000243181.2] WARNING, no entry stored in dbm for [ENSG00000267801.1] WARNING, no entry stored in dbm for [ENSG00000115934.11] WARNING, no entry stored in dbm for [ENSG00000255182.2] WARNING, no entry stored in dbm for [ENSG00000224573.1] WARNING, no entry stored in dbm for [ENSG00000286705.1] WARNING, no entry stored in dbm for [ENSG00000234129.8] WARNING, no entry stored in dbm for [ENSG00000257337.7] WARNING, no entry stored in dbm for [ENSG00000285606.1] WARNING, no entry stored in dbm for [ENSG00000253899.1] WARNING, no entry stored in dbm for [ENSG00000227902.2] WARNING, no entry stored in dbm for [ENSG00000229212.8] WARNING, no entry stored in dbm for [ENSG00000229212.8] WARNING, no entry stored in dbm for [ENSG00000254951.7] WARNING, no entry stored in dbm for [ENSG00000254951.7] WARNING, no entry stored in dbm for [ENSG00000258168.6] WARNING, no entry stored in dbm for [ENSG00000259563.1] WARNING, no entry stored in dbm for [ENSG00000215068.8] WARNING, no entry stored in dbm for [ENSG00000248515.2] WARNING, no entry stored in dbm for [ENSG00000240669.1] WARNING, no entry stored in dbm for [ENSG00000272140.2] WARNING, no entry stored in dbm for [ENSG00000242338.6] WARNING, no entry stored in dbm for [ENSG00000269886.1] WARNING, no entry stored in dbm for [ENSG00000269886.1] WARNING, no entry stored in dbm for [ENSG00000235357.2] WARNING, no entry stored in dbm for [ENSG00000224722.3] WARNING, no entry stored in dbm for [ENSG00000266573.6] WARNING, no entry stored in dbm for [ENSG00000233862.7] WARNING, no entry stored in dbm for [ENSG00000285106.2] WARNING, no entry stored in dbm for [ENSG00000269032.1] WARNING, no entry stored in dbm for [ENSG00000184319.16] WARNING, no entry stored in dbm for [ENSG00000232386.9] WARNING, no entry stored in dbm for [ENSG00000267607.1] WARNING, no entry stored in dbm for [ENSG00000243829.1] WARNING, no entry stored in dbm for [ENSG00000268583.2] WARNING, no entry stored in dbm for [ENSG00000235522.6] WARNING, no entry stored in dbm for [ENSG00000276663.1] WARNING, no entry stored in dbm for [ENSG00000234996.4] WARNING, no entry stored in dbm for [ENSG00000279583.1] WARNING, no entry stored in dbm for [ENSG00000205534.6] WARNING, no entry stored in dbm for [ENSG00000257403.2] WARNING, no entry stored in dbm for [ENSG00000189149.12] WARNING, no entry stored in dbm for [ENSG00000226472.8] WARNING, no entry stored in dbm for [ENSG00000173357.12] WARNING, no entry stored in dbm for [ENSG00000233565.1] WARNING, no entry stored in dbm for [ENSG00000241112.1] WARNING, no entry stored in dbm for [ENSG00000256139.2] WARNING, no entry stored in dbm for [ENSG00000277458.1] WARNING, no entry stored in dbm for [ENSG00000278959.1] WARNING, no entry stored in dbm for [ENSG00000268460.2] WARNING, no entry stored in dbm for [ENSG00000267469.1] WARNING, no entry stored in dbm for [ENSG00000204990.3] WARNING, no entry stored in dbm for [ENSG00000204990.3] WARNING, no entry stored in dbm for [ENSG00000204990.3] WARNING, no entry stored in dbm for [ENSG00000279726.2] WARNING, no entry stored in dbm for [ENSG00000267623.3] WARNING, no entry stored in dbm for [ENSG00000214243.3] WARNING, no entry stored in dbm for [ENSG00000205485.13] WARNING, no entry stored in dbm for [ENSG00000243554.1] WARNING, no entry stored in dbm for [ENSG00000287574.1] WARNING, no entry stored in dbm for [ENSG00000282840.1] WARNING, no entry stored in dbm for [ENSG00000268163.1] WARNING, no entry stored in dbm for [ENSG00000203875.13] WARNING, no entry stored in dbm for [ENSG00000279159.1] WARNING, no entry stored in dbm for [ENSG00000261303.6] WARNING, no entry stored in dbm for [ENSG00000251595.7] WARNING, no entry stored in dbm for [ENSG00000251595.7] * STAR-Fusion complete. See output: /tmp/nxf.0ieyki3J3l/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)