Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/6c/c5a7c045928348decd0e8878c6fda2/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1f/2ae11ea871e4445bd2af6e918d117e/659_bGW-T1-TRNA-1_B23WHTKLT4_1.sample_qc.tsv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/3f/b16ce54480c7693d977dee7bd84cd8/659_bGW-T1-TRNA-1_B23WHTKLT4_1
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/6c/c5a7c045928348decd0e8878c6fda2/.command.run
==> STAGING COMPLETE (4 inputs)

Processing Kallisto file: 659_bGW-T1-TRNA-1_B23WHTKLT4_1/abundance.h5
Successfully converted 659_bGW-T1-TRNA-1_B23WHTKLT4_1/abundance.h5 to 659_bGW-T1-TRNA-1_B23WHTKLT4_1_kallisto_mqc.tsv
  Sample: 659_bGW-T1-TRNA-1_B23WHTKLT4_1
  Mean Fragment Length: 143.4 bp
  Median Fragment Length: 131.0 bp
  pct_mito_est_counts: 0.009%
  pct_ribo_est_counts: 1.279%
  pct_hk_est_counts: 0.655%
  pct_male_est_counts: 0.0%
  pct_mito_tpm: 0.018%
  pct_ribo_tpm: 4.104%
  pct_hk_tpm: 0.978%
  pct_male_tpm: 0.0%
  score_log2tpm1_mean_chry_signature: 0.007%