File Info

Filename
fi_workdir/Log.final.out
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/00/2007b29c08245fae1591d03403d00d/fi_workdir/Log.final.out
Size
2.0 KB
Attempt
                                 Started job on |	Jun 08 10:22:41
                             Started mapping on |	Jun 08 10:30:06
                                    Finished on |	Jun 08 11:35:44
       Mapping speed, Million of reads per hour |	270.19

                          Number of input reads |	295561665
                      Average input read length |	262
                                    UNIQUE READS:
                   Uniquely mapped reads number |	285913147
                        Uniquely mapped reads % |	96.74%
                          Average mapped length |	261.88
                       Number of splices: Total |	349955947
            Number of splices: Annotated (sjdb) |	345106764
                       Number of splices: GT/AG |	345865994
                       Number of splices: GC/AG |	2290048
                       Number of splices: AT/AC |	249525
               Number of splices: Non-canonical |	1550380
                      Mismatch rate per base, % |	0.18%
                         Deletion rate per base |	0.02%
                        Deletion average length |	2.25
                        Insertion rate per base |	0.00%
                       Insertion average length |	1.81
                             MULTI-MAPPING READS:
        Number of reads mapped to multiple loci |	6847211
             % of reads mapped to multiple loci |	2.32%
        Number of reads mapped to too many loci |	252957
             % of reads mapped to too many loci |	0.09%
                                  UNMAPPED READS:
  Number of reads unmapped: too many mismatches |	0
       % of reads unmapped: too many mismatches |	0.00%
            Number of reads unmapped: too short |	2169654
                 % of reads unmapped: too short |	0.73%
                Number of reads unmapped: other |	378696
                     % of reads unmapped: other |	0.13%
                                  CHIMERIC READS:
                       Number of chimeric reads |	0
                            % of chimeric reads |	0.00%