File Info

Filename
fi_workdir/Log.final.out
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a0/36375048b913e3c514de89d502289b/fi_workdir/Log.final.out
Size
2.0 KB
Attempt
                                 Started job on |	Jun 08 10:08:16
                             Started mapping on |	Jun 08 10:14:47
                                    Finished on |	Jun 08 11:27:49
       Mapping speed, Million of reads per hour |	242.91

                          Number of input reads |	295675936
                      Average input read length |	262
                                    UNIQUE READS:
                   Uniquely mapped reads number |	286864675
                        Uniquely mapped reads % |	97.02%
                          Average mapped length |	261.64
                       Number of splices: Total |	407745558
            Number of splices: Annotated (sjdb) |	402509698
                       Number of splices: GT/AG |	403808519
                       Number of splices: GC/AG |	1998586
                       Number of splices: AT/AC |	210317
               Number of splices: Non-canonical |	1728136
                      Mismatch rate per base, % |	0.18%
                         Deletion rate per base |	0.02%
                        Deletion average length |	2.21
                        Insertion rate per base |	0.00%
                       Insertion average length |	1.65
                             MULTI-MAPPING READS:
        Number of reads mapped to multiple loci |	6156178
             % of reads mapped to multiple loci |	2.08%
        Number of reads mapped to too many loci |	305937
             % of reads mapped to too many loci |	0.10%
                                  UNMAPPED READS:
  Number of reads unmapped: too many mismatches |	0
       % of reads unmapped: too many mismatches |	0.00%
            Number of reads unmapped: too short |	2091771
                 % of reads unmapped: too short |	0.71%
                Number of reads unmapped: other |	257375
                     % of reads unmapped: other |	0.09%
                                  CHIMERIC READS:
                       Number of chimeric reads |	0
                            % of chimeric reads |	0.00%