Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/7e/88a76b90ef42ed24fd9947b07cab03/659_c95-T1-TRNA-1_B23WHTKLT4_1.star_alignment.Aligned.sortedByCoord.out.cram
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5b/6c73d7e9fb0ae6148f37e98c6c6785/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5b/6c73d7e9fb0ae6148f37e98c6c6785/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.bai: No such file or directory
ls: *.csi: No such file or directory