Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1b/f4515b09ad0856e22118432103ff4e/659_6i-T1-TRNA-1_B23WHTKLT4_1
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e8/3959bba75f26a768d05e50cebd17ca/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e8/3959bba75f26a768d05e50cebd17ca/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/37/dc8c903a3b9b6369b24d2c84645c86/659_6i-T1-TRNA-1_B23WHTKLT4_1.sample_qc.tsv
==> STAGING COMPLETE (4 inputs)

Processing Kallisto file: 659_6i-T1-TRNA-1_B23WHTKLT4_1/abundance.h5
Successfully converted 659_6i-T1-TRNA-1_B23WHTKLT4_1/abundance.h5 to 659_6i-T1-TRNA-1_B23WHTKLT4_1_kallisto_mqc.tsv
  Sample: 659_6i-T1-TRNA-1_B23WHTKLT4_1
  Mean Fragment Length: 130.2 bp
  Median Fragment Length: 123.0 bp
  pct_mito_est_counts: 0.005%
  pct_ribo_est_counts: 1.347%
  pct_hk_est_counts: 0.395%
  pct_male_est_counts: 0.0%
  pct_mito_tpm: 0.01%
  pct_ribo_tpm: 4.114%
  pct_hk_tpm: 0.631%
  pct_male_tpm: 0.0%
  score_log2tpm1_mean_chry_signature: 6.397%