Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/93/89b26d87e15b825bf684d955c522fc/tih_rna_sample_00145_B23WHTKLT4_2.star_alignment.Aligned.sortedByCoord.out.cram
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ee/293874d1a056dd3b242230a9fdc722/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ee/293874d1a056dd3b242230a9fdc722/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.bai: No such file or directory
ls: *.csi: No such file or directory