-ctat genome lib [/tmp/nxf.uHnxWQdjOJ/ctat_genome_lib_build_dir] validates.
CMD: mkdir -p /tmp/nxf.uHnxWQdjOJ/./_starF_checkpoints
CMD: mkdir -p /tmp/nxf.uHnxWQdjOJ/./star-fusion.preliminary
-sample contains 208876971 rnaseq fragments
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes --genome_lib_dir /tmp/nxf.uHnxWQdjOJ/ctat_genome_lib_build_dir -J /tmp/nxf.uHnxWQdjOJ/tih_rna_sample_00090_B23WHTKLT4_1.Chimeric.out.junction -O /tmp/nxf.uHnxWQdjOJ/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4
-parsing fusion evidence: /tmp/nxf.uHnxWQdjOJ/tih_rna_sample_00090_B23WHTKLT4_1.Chimeric.out.junction
-building interval tree based on /tmp/nxf.uHnxWQdjOJ/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes
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[2210000], rate=59143.62/min -building interval tree based on /tmp/nxf.uHnxWQdjOJ/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes
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[2200000], rate=57391.30/min -building interval tree based on /tmp/nxf.uHnxWQdjOJ/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.08 min).
-mapping reads to genes
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[2180000], rate=45087.90/min
[2190000], rate=44938.44/min -building interval tree based on /tmp/nxf.uHnxWQdjOJ/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes
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[2210000], rate=41869.28/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads -J /tmp/nxf.uHnxWQdjOJ/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --genome_lib_dir /tmp/nxf.uHnxWQdjOJ/ctat_genome_lib_build_dir --filt_file /tmp/nxf.uHnxWQdjOJ/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail -M 50 > /tmp/nxf.uHnxWQdjOJ/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-parsing /tmp/nxf.uHnxWQdjOJ/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info.
0.00 reads per min processed...
12000000.00 reads per min processed...
18000000.00 reads per min processed...
24000000.00 reads per min processed...
15000000.00 reads per min processed...
18000000.00 reads per min processed...
14000000.00 reads per min processed...
16000000.00 reads per min processed...
13500000.00 reads per min processed...
10000000.00 reads per min processed...
8250000.00 reads per min processed...
7200000.00 reads per min processed...
7090909.09 reads per min processed...
6461538.46 reads per min processed...
6000000.00 reads per min processed...
6000000.00 reads per min processed...
5666666.67 reads per min processed...
5400000.00 reads per min processed...
5181818.18 reads per min processed...
5000000.00 reads per min processed...
5040000.00 reads per min processed...
4888888.89 reads per min processed...
4758620.69 reads per min processed...
4645161.29 reads per min processed...
4687500.00 reads per min processed...
4588235.29 reads per min processed...
4500000.00 reads per min processed...
4421052.63 reads per min processed...
4350000.00 reads per min processed...
4285714.29 reads per min processed...
4227272.73 reads per min processed...
4173913.04 reads per min processed...
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4080000.00 reads per min processed...
4038461.54 reads per min processed...
4075471.70 reads per min processed...
4036363.64 reads per min processed...
4071428.57 reads per min processed...
4034482.76 reads per min processed...
4000000.00 reads per min processed...
4032786.89 reads per min processed...
4000000.00 reads per min processed...
3969230.77 reads per min processed...
4000000.00 reads per min processed...
4029850.75 reads per min processed...
4000000.00 reads per min processed...
4028571.43 reads per min processed...
4056338.03 reads per min processed...
4140845.07 reads per min processed...
4166666.67 reads per min processed...
4191780.82 reads per min processed...
4273972.60 reads per min processed...
4240000.00 reads per min processed...
4263157.89 reads per min processed...
4230769.23 reads per min processed...
4200000.00 reads per min processed...
4170731.71 reads per min processed...
4192771.08 reads per min processed...
4164705.88 reads per min processed...
4186046.51 reads per min processed...
4159090.91 reads per min processed...
4133333.33 reads per min processed...
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4129032.26 reads per min processed...
4105263.16 reads per min processed...
4082474.23 reads per min processed...
4060606.06 reads per min processed...
4080000.00 reads per min processed...
4058823.53 reads per min processed...
4038461.54 reads per min processed...
4057142.86 reads per min processed...
4037383.18 reads per min processed...
4055555.56 reads per min processed...
4036363.64 reads per min processed...
4017857.14 reads per min processed...
done.
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict -J /tmp/nxf.uHnxWQdjOJ/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -O /tmp/nxf.uHnxWQdjOJ/./star-fusion.preliminary/star-fusion
-parsing fusion evidence: /tmp/nxf.uHnxWQdjOJ/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-outputting fusion candidates to file: /tmp/nxf.uHnxWQdjOJ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter --fusion_preds /tmp/nxf.uHnxWQdjOJ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary -J /tmp/nxf.uHnxWQdjOJ/tih_rna_sample_00090_B23WHTKLT4_1.Chimeric.out.junction --tmpdir /tmp --min_junction_reads 0 --min_sum_frags 1 --require_LDAS 0 --max_promiscuity 10 --min_pct_dom_promiscuity 20 --min_novel_junction_support 1 --min_alt_pct_junction 10 --aggregate_novel_junction_dist 5 --min_spanning_frags_only 1 --genome_lib_dir /tmp/nxf.uHnxWQdjOJ/ctat_genome_lib_build_dir --out_prefix /tmp/nxf.uHnxWQdjOJ/./star-fusion.preliminary/star-fusion
CMD: mkdir -p /tmp/nxf.uHnxWQdjOJ/./star-fusion.preliminary/star-fusion.filter.intermediates_dir
EM: Starting log likelihood: -275430.757408
EM: Round [1] log likelihood: -275208.607297
EM: Round [2] log likelihood: -275126.182554
EM: Round [3] log likelihood: -275086.482903
EM: Round [4] log likelihood: -275065.065479
EM: Round [5] log likelihood: -275052.882609
EM: Round [6] log likelihood: -275045.703886
EM: Round [7] log likelihood: -275041.331633
EM: Round [8] log likelihood: -275038.576676
EM: Round [9] log likelihood: -275036.779736
EM: Round [10] log likelihood: -275035.566953
EM: Round [11] log likelihood: -275034.721231
EM: Round [12] log likelihood: -275034.113267
EM: Round [13] log likelihood: -275033.663955
EM: Round [14] log likelihood: -275033.323562
EM: Round [15] log likelihood: -275033.059958
EM: Round [16] log likelihood: -275032.851838
EM: Round [17] log likelihood: -275032.684711
EM: Round [18] log likelihood: -275032.548496
EM: Round [19] log likelihood: -275032.436019
EM: Round [20] log likelihood: -275032.342077
EM: Round [21] log likelihood: -275032.262824
EM: Round [22] log likelihood: -275032.195370
EM: Round [23] log likelihood: -275032.137510
EM: Round [24] log likelihood: -275032.087537
EM: Round [25] log likelihood: -275032.044113
EM: Round [26] log likelihood: -275032.006176
EM: Round [27] log likelihood: -275031.972873
EM: Round [28] log likelihood: -275031.943513
EM: Round [29] log likelihood: -275031.917530
EM: Round [30] log likelihood: -275031.894455
EM: Round [31] log likelihood: -275031.873900
EM: Round [32] log likelihood: -275031.855538
EM: Round [33] log likelihood: -275031.839092
EM: Round [34] log likelihood: -275031.824328
EM: Round [35] log likelihood: -275031.811045
EM: Round [36] log likelihood: -275031.799070
EM: Round [37] log likelihood: -275031.788253
EM: Round [38] log likelihood: -275031.778466
EM: Round [39] log likelihood: -275031.769596
EM: Round [40] log likelihood: -275031.761543
EM: Round [41] log likelihood: -275031.754222
EM: Round [42] log likelihood: -275031.747556
EM: Round [43] log likelihood: -275031.741477
EM: Round [44] log likelihood: -275031.735927
EM: Round [45] log likelihood: -275031.730852
EM: Round [46] log likelihood: -275031.726205
EM: Round [47] log likelihood: -275031.721945
EM: Round [48] log likelihood: -275031.718035
EM: Round [49] log likelihood: -275031.714440
EM: Round [50] log likelihood: -275031.711131
EM: Round [51] log likelihood: -275031.708082
EM: Round [52] log likelihood: -275031.705268
EM: Round [53] log likelihood: -275031.702668
EM: Round [54] log likelihood: -275031.700261
EM: Round [55] log likelihood: -275031.698032
EM: Round [56] log likelihood: -275031.695964
EM: Round [57] log likelihood: -275031.694042
EM: Round [58] log likelihood: -275031.692255
EM: Round [59] log likelihood: -275031.690589
EM: Round [60] log likelihood: -275031.689036
EM: Round [61] log likelihood: -275031.687585
EM: Round [62] log likelihood: -275031.686227
EM: Round [63] log likelihood: -275031.684956
EM: Round [64] log likelihood: -275031.683763
EM: Round [65] log likelihood: -275031.682642
EM: Round [66] log likelihood: -275031.681588
EM: Round [67] log likelihood: -275031.680595
EM: Round [68] log likelihood: -275031.679659
EM: Round [69] log likelihood: -275031.678774
EM: Round [70] log likelihood: -275031.677937
EM: Round [71] log likelihood: -275031.677145
EM: Round [72] log likelihood: -275031.676393
EM: Round [73] log likelihood: -275031.675680
EM: Round [74] log likelihood: -275031.675001
EM: Round [75] log likelihood: -275031.674355
EM: Round [76] log likelihood: -275031.673739
EM: Round [77] log likelihood: -275031.673152
EM: Round [78] log likelihood: -275031.672591
EM: Round [79] log likelihood: -275031.672054
EM: Round [80] log likelihood: -275031.671540
EM: Round [81] log likelihood: -275031.671047
EM: Round [82] log likelihood: -275031.670574
EM: Round [83] log likelihood: -275031.670120
EM: Round [84] log likelihood: -275031.669684
EM: Round [85] log likelihood: -275031.669264
EM: Round [86] log likelihood: -275031.668859
EM: Round [87] log likelihood: -275031.668469
EM: Round [88] log likelihood: -275031.668093
EM: Round [89] log likelihood: -275031.667729
EM: Round [90] log likelihood: -275031.667379
EM: Round [91] log likelihood: -275031.667039
EM: Round [92] log likelihood: -275031.666711
EM: Round [93] log likelihood: -275031.666393
EM: Round [94] log likelihood: -275031.666085
EM: Round [95] log likelihood: -275031.665786
EM: Round [96] log likelihood: -275031.665497
EM: Round [97] log likelihood: -275031.665216
EM: Round [98] log likelihood: -275031.664943
EM: Round [99] log likelihood: -275031.664678
EM: Round [100] log likelihood: -275031.664421
EM: Round [101] log likelihood: -275031.664170
EM: Round [102] log likelihood: -275031.663927
EM: Round [103] log likelihood: -275031.663690
EM: Round [104] log likelihood: -275031.663459
EM: Round [105] log likelihood: -275031.663235
EM: Round [106] log likelihood: -275031.663016
EM: Round [107] log likelihood: -275031.662803
EM: Round [108] log likelihood: -275031.662595
EM: Round [109] log likelihood: -275031.662393
EM: Round [110] log likelihood: -275031.662196
EM: Round [111] log likelihood: -275031.662003
EM: Round [112] log likelihood: -275031.661816
EM: Round [113] log likelihood: -275031.661632
EM: Round [114] log likelihood: -275031.661454
EM: Round [115] log likelihood: -275031.661279
EM: Round [116] log likelihood: -275031.661109
EM: Round [117] log likelihood: -275031.660942
EM: Round [118] log likelihood: -275031.660780
EM: Round [119] log likelihood: -275031.660621
EM: Round [120] log likelihood: -275031.660466
EM: Round [121] log likelihood: -275031.660314
EM: Round [122] log likelihood: -275031.660166
EM: Round [123] log likelihood: -275031.660022
EM: Round [124] log likelihood: -275031.659880
EM: Round [125] log likelihood: -275031.659742
EM: Round [126] log likelihood: -275031.659607
EM: Round [127] log likelihood: -275031.659475
EM: Round [128] log likelihood: -275031.659346
EM: Round [129] log likelihood: -275031.659219
EM: Round [130] log likelihood: -275031.659096
EM: Round [131] log likelihood: -275031.658975
EM: Round [132] log likelihood: -275031.658857
EM: Round [133] log likelihood: -275031.658741
EM: Round [134] log likelihood: -275031.658628
EM: Round [135] log likelihood: -275031.658517
EM: Round [136] log likelihood: -275031.658409
EM: Round [137] log likelihood: -275031.658303
EM: Round [138] log likelihood: -275031.658199
EM: Round [139] log likelihood: -275031.658098
EM: Round [140] log likelihood: -275031.657998
EM: Stopping iterations at round 140 due to insufficient improvement in likelihood.
EM: Starting log likelihood: -275164.151998
EM: Round [1] log likelihood: -274977.822332
EM: Round [2] log likelihood: -274910.461259
EM: Round [3] log likelihood: -274878.532011
EM: Round [4] log likelihood: -274861.502149
EM: Round [5] log likelihood: -274851.910837
EM: Round [6] log likelihood: -274846.312624
EM: Round [7] log likelihood: -274842.933393
EM: Round [8] log likelihood: -274840.820112
EM: Round [9] log likelihood: -274839.448951
EM: Round [10] log likelihood: -274838.526007
EM: Round [11] log likelihood: -274837.882538
EM: Round [12] log likelihood: -274837.419092
EM: Round [13] log likelihood: -274837.075373
EM: Round [14] log likelihood: -274836.813735
EM: Round [15] log likelihood: -274836.609984
EM: Round [16] log likelihood: -274836.448128
EM: Round [17] log likelihood: -274836.317312
EM: Round [18] log likelihood: -274836.209985
EM: Round [19] log likelihood: -274836.120775
EM: Round [20] log likelihood: -274836.045778
EM: Round [21] log likelihood: -274835.982107
EM: Round [22] log likelihood: -274835.927585
EM: Round [23] log likelihood: -274835.880547
EM: Round [24] log likelihood: -274835.839700
EM: Round [25] log likelihood: -274835.804025
EM: Round [26] log likelihood: -274835.772712
EM: Round [27] log likelihood: -274835.745105
EM: Round [28] log likelihood: -274835.720670
EM: Round [29] log likelihood: -274835.698968
EM: Round [30] log likelihood: -274835.679633
EM: Round [31] log likelihood: -274835.662359
EM: Round [32] log likelihood: -274835.646887
EM: Round [33] log likelihood: -274835.632996
EM: Round [34] log likelihood: -274835.620499
EM: Round [35] log likelihood: -274835.609234
EM: Round [36] log likelihood: -274835.599061
EM: Round [37] log likelihood: -274835.589857
EM: Round [38] log likelihood: -274835.581517
EM: Round [39] log likelihood: -274835.573947
EM: Round [40] log likelihood: -274835.567066
EM: Round [41] log likelihood: -274835.560803
EM: Round [42] log likelihood: -274835.555093
EM: Round [43] log likelihood: -274835.549880
EM: Round [44] log likelihood: -274835.545114
EM: Round [45] log likelihood: -274835.540752
EM: Round [46] log likelihood: -274835.536752
EM: Round [47] log likelihood: -274835.533081
EM: Round [48] log likelihood: -274835.529705
EM: Round [49] log likelihood: -274835.526598
EM: Round [50] log likelihood: -274835.523734
EM: Round [51] log likelihood: -274835.521091
EM: Round [52] log likelihood: -274835.518647
EM: Round [53] log likelihood: -274835.516384
EM: Round [54] log likelihood: -274835.514287
EM: Round [55] log likelihood: -274835.512339
EM: Round [56] log likelihood: -274835.510529
EM: Round [57] log likelihood: -274835.508843
EM: Round [58] log likelihood: -274835.507271
EM: Round [59] log likelihood: -274835.505804
EM: Round [60] log likelihood: -274835.504431
EM: Round [61] log likelihood: -274835.503145
EM: Round [62] log likelihood: -274835.501939
EM: Round [63] log likelihood: -274835.500806
EM: Round [64] log likelihood: -274835.499740
EM: Round [65] log likelihood: -274835.498736
EM: Round [66] log likelihood: -274835.497789
EM: Round [67] log likelihood: -274835.496893
EM: Round [68] log likelihood: -274835.496046
EM: Round [69] log likelihood: -274835.495244
EM: Round [70] log likelihood: -274835.494483
EM: Round [71] log likelihood: -274835.493759
EM: Round [72] log likelihood: -274835.493071
EM: Round [73] log likelihood: -274835.492416
EM: Round [74] log likelihood: -274835.491790
EM: Round [75] log likelihood: -274835.491193
EM: Round [76] log likelihood: -274835.490623
EM: Round [77] log likelihood: -274835.490076
EM: Round [78] log likelihood: -274835.489553
EM: Round [79] log likelihood: -274835.489051
EM: Round [80] log likelihood: -274835.488569
EM: Round [81] log likelihood: -274835.488106
EM: Round [82] log likelihood: -274835.487660
EM: Round [83] log likelihood: -274835.487231
EM: Round [84] log likelihood: -274835.486817
EM: Round [85] log likelihood: -274835.486418
EM: Round [86] log likelihood: -274835.486032
EM: Round [87] log likelihood: -274835.485660
EM: Round [88] log likelihood: -274835.485300
EM: Round [89] log likelihood: -274835.484952
EM: Round [90] log likelihood: -274835.484615
EM: Round [91] log likelihood: -274835.484288
EM: Round [92] log likelihood: -274835.483972
EM: Round [93] log likelihood: -274835.483665
EM: Round [94] log likelihood: -274835.483367
EM: Round [95] log likelihood: -274835.483077
EM: Round [96] log likelihood: -274835.482796
EM: Round [97] log likelihood: -274835.482523
EM: Round [98] log likelihood: -274835.482257
EM: Round [99] log likelihood: -274835.481999
EM: Round [100] log likelihood: -274835.481748
EM: Round [101] log likelihood: -274835.481503
EM: Round [102] log likelihood: -274835.481265
EM: Round [103] log likelihood: -274835.481033
EM: Round [104] log likelihood: -274835.480807
EM: Round [105] log likelihood: -274835.480587
EM: Round [106] log likelihood: -274835.480372
EM: Round [107] log likelihood: -274835.480162
EM: Round [108] log likelihood: -274835.479958
EM: Round [109] log likelihood: -274835.479759
EM: Round [110] log likelihood: -274835.479565
EM: Round [111] log likelihood: -274835.479375
EM: Round [112] log likelihood: -274835.479190
EM: Round [113] log likelihood: -274835.479009
EM: Round [114] log likelihood: -274835.478832
EM: Round [115] log likelihood: -274835.478660
EM: Round [116] log likelihood: -274835.478491
EM: Round [117] log likelihood: -274835.478327
EM: Round [118] log likelihood: -274835.478166
EM: Round [119] log likelihood: -274835.478009
EM: Round [120] log likelihood: -274835.477855
EM: Round [121] log likelihood: -274835.477705
EM: Round [122] log likelihood: -274835.477558
EM: Round [123] log likelihood: -274835.477415
EM: Round [124] log likelihood: -274835.477275
EM: Round [125] log likelihood: -274835.477137
EM: Round [126] log likelihood: -274835.477003
EM: Round [127] log likelihood: -274835.476872
EM: Round [128] log likelihood: -274835.476744
EM: Round [129] log likelihood: -274835.476618
EM: Round [130] log likelihood: -274835.476496
EM: Round [131] log likelihood: -274835.476376
EM: Round [132] log likelihood: -274835.476258
EM: Round [133] log likelihood: -274835.476143
EM: Round [134] log likelihood: -274835.476031
EM: Round [135] log likelihood: -274835.475921
EM: Round [136] log likelihood: -274835.475813
EM: Round [137] log likelihood: -274835.475708
EM: Round [138] log likelihood: -274835.475604
EM: Round [139] log likelihood: -274835.475504
EM: Round [140] log likelihood: -274835.475405
EM: Stopping iterations at round 140 due to insufficient improvement in likelihood.
CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.uHnxWQdjOJ/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20 --fusion_preds /tmp/nxf.uHnxWQdjOJ/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.uHnxWQdjOJ/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.uHnxWQdjOJ/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.uHnxWQdjOJ/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.uHnxWQdjOJ/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter --genome_lib_dir /tmp/nxf.uHnxWQdjOJ/ctat_genome_lib_build_dir --max_promiscuity 10 --min_pct_dom_promiscuity 20
CMD: cp /tmp/nxf.uHnxWQdjOJ/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.uHnxWQdjOJ/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter
CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.uHnxWQdjOJ/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.uHnxWQdjOJ/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged
CMD: ln -sf /tmp/nxf.uHnxWQdjOJ/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.uHnxWQdjOJ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered
* Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.uHnxWQdjOJ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 208876971 > /tmp/nxf.uHnxWQdjOJ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM
* Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.uHnxWQdjOJ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.uHnxWQdjOJ/ctat_genome_lib_build_dir > /tmp/nxf.uHnxWQdjOJ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.uHnxWQdjOJ/ctat_genome_lib_build_dir --annotate /tmp/nxf.uHnxWQdjOJ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.uHnxWQdjOJ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot
* Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.uHnxWQdjOJ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.uHnxWQdjOJ/ctat_genome_lib_build_dir
-done, see /tmp/nxf.uHnxWQdjOJ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.uHnxWQdjOJ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.uHnxWQdjOJ/ctat_genome_lib_build_dir
-filter_likely_RT_artifacts: (pass: 1759, filtered: 10639)
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.uHnxWQdjOJ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001
* Running CMD: cp /tmp/nxf.uHnxWQdjOJ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv
* Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.uHnxWQdjOJ/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv
WARNING, no entry stored in dbm for [IGH-.g@-ext]
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WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
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WARNING, no entry stored in dbm for [IGH.g@-ext]
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WARNING, no entry stored in dbm for [IGH-.g@-ext]
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WARNING, no entry stored in dbm for [IGH.g@-ext]
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WARNING, no entry stored in dbm for [IGL.g@-ext]
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WARNING, no entry stored in dbm for [ENSG00000228818.1]
WARNING, no entry stored in dbm for [ENSG00000228463.10]
WARNING, no entry stored in dbm for [ENSG00000228463.10]
WARNING, no entry stored in dbm for [ENSG00000287411.1]
WARNING, no entry stored in dbm for [ENSG00000185986.12]
WARNING, no entry stored in dbm for [ENSG00000188002.10]
WARNING, no entry stored in dbm for [ENSG00000214826.5]
WARNING, no entry stored in dbm for [ENSG00000227681.5]
WARNING, no entry stored in dbm for [ENSG00000235903.9]
WARNING, no entry stored in dbm for [ENSG00000225482.1]
WARNING, no entry stored in dbm for [ENSG00000256218.1]
WARNING, no entry stored in dbm for [ENSG00000231307.1]
WARNING, no entry stored in dbm for [ENSG00000218351.2]
WARNING, no entry stored in dbm for [ENSG00000230116.1]
WARNING, no entry stored in dbm for [ENSG00000213238.6]
WARNING, no entry stored in dbm for [ENSG00000216639.1]
WARNING, no entry stored in dbm for [ENSG00000269296.1]
WARNING, no entry stored in dbm for [ENSG00000236801.1]
WARNING, no entry stored in dbm for [ENSG00000244237.1]
WARNING, no entry stored in dbm for [ENSG00000239315.4]
WARNING, no entry stored in dbm for [ENSG00000218227.3]
WARNING, no entry stored in dbm for [ENSG00000241923.2]
WARNING, no entry stored in dbm for [ENSG00000224987.1]
WARNING, no entry stored in dbm for [ENSG00000212172.1]
WARNING, no entry stored in dbm for [ENSG00000222976.1]
WARNING, no entry stored in dbm for [ENSG00000201684.1]
WARNING, no entry stored in dbm for [ENSG00000202351.1]
WARNING, no entry stored in dbm for [ENSG00000201875.1]
WARNING, no entry stored in dbm for [ENSG00000237899.1]
WARNING, no entry stored in dbm for [ENSG00000282933.2]
WARNING, no entry stored in dbm for [ENSG00000258279.4]
WARNING, no entry stored in dbm for [ENSG00000249418.2]
WARNING, no entry stored in dbm for [ENSG00000250938.6]
WARNING, no entry stored in dbm for [ENSG00000213174.3]
WARNING, no entry stored in dbm for [ENSG00000258012.1]
WARNING, no entry stored in dbm for [ENSG00000262962.1]
WARNING, no entry stored in dbm for [ENSG00000274979.1]
WARNING, no entry stored in dbm for [ENSG00000258033.1]
WARNING, no entry stored in dbm for [ENSG00000249859.12]
WARNING, no entry stored in dbm for [ENSG00000228797.2]
WARNING, no entry stored in dbm for [ENSG00000196796.5]
WARNING, no entry stored in dbm for [ENSG00000226629.1]
WARNING, no entry stored in dbm for [ENSG00000212664.5]
WARNING, no entry stored in dbm for [ENSG00000277654.6]
WARNING, no entry stored in dbm for [ENSG00000099725.14]
WARNING, no entry stored in dbm for [ENSG00000250303.4]
WARNING, no entry stored in dbm for [ENSG00000227851.1]
WARNING, no entry stored in dbm for [ENSG00000221817.10]
WARNING, no entry stored in dbm for [ENSG00000225138.8]
WARNING, no entry stored in dbm for [ENSG00000226401.3]
WARNING, no entry stored in dbm for [ENSG00000225746.13]
WARNING, no entry stored in dbm for [ENSG00000258699.1]
WARNING, no entry stored in dbm for [ENSG00000266371.1]
WARNING, no entry stored in dbm for [ENSG00000287286.1]
WARNING, no entry stored in dbm for [ENSG00000237949.2]
WARNING, no entry stored in dbm for [ENSG00000183506.17]
WARNING, no entry stored in dbm for [ENSG00000199568.1]
WARNING, no entry stored in dbm for [ENSG00000287040.1]
WARNING, no entry stored in dbm for [ENSG00000287383.1]
WARNING, no entry stored in dbm for [ENSG00000240405.7]
WARNING, no entry stored in dbm for [ENSG00000249699.1]
WARNING, no entry stored in dbm for [ENSG00000286330.1]
WARNING, no entry stored in dbm for [ENSG00000253438.4]
WARNING, no entry stored in dbm for [ENSG00000281880.2]
WARNING, no entry stored in dbm for [ENSG00000256862.3]
WARNING, no entry stored in dbm for [ENSG00000288530.1]
WARNING, no entry stored in dbm for [ENSG00000247556.6]
WARNING, no entry stored in dbm for [ENSG00000229209.1]
WARNING, no entry stored in dbm for [ENSG00000249419.1]
WARNING, no entry stored in dbm for [ENSG00000210049.1]
WARNING, no entry stored in dbm for [ENSG00000262879.6]
WARNING, no entry stored in dbm for [ENSG00000225159.1]
WARNING, no entry stored in dbm for [ENSG00000237445.2]
WARNING, no entry stored in dbm for [ENSG00000280222.1]
WARNING, no entry stored in dbm for [ENSG00000224081.9]
WARNING, no entry stored in dbm for [ENSG00000215790.8]
WARNING, no entry stored in dbm for [ENSG00000272145.1]
WARNING, no entry stored in dbm for [ENSG00000275642.1]
WARNING, no entry stored in dbm for [ENSG00000236051.7]
WARNING, no entry stored in dbm for [ENSG00000213740.2]
WARNING, no entry stored in dbm for [ENSG00000286960.1]
WARNING, no entry stored in dbm for [ENSG00000233225.3]
WARNING, no entry stored in dbm for [ENSG00000233057.1]
WARNING, no entry stored in dbm for [ENSG00000197182.14]
WARNING, no entry stored in dbm for [ENSG00000236172.7]
WARNING, no entry stored in dbm for [ENSG00000203709.12]
WARNING, no entry stored in dbm for [ENSG00000267519.6]
WARNING, no entry stored in dbm for [ENSG00000261641.2]
WARNING, no entry stored in dbm for [ENSG00000186594.14]
WARNING, no entry stored in dbm for [ENSG00000283240.1]
WARNING, no entry stored in dbm for [ENSG00000230649.3]
WARNING, no entry stored in dbm for [ENSG00000287303.1]
WARNING, no entry stored in dbm for [ENSG00000261286.1]
WARNING, no entry stored in dbm for [ENSG00000262185.3]
WARNING, no entry stored in dbm for [ENSG00000259663.2]
WARNING, no entry stored in dbm for [ENSG00000239699.1]
WARNING, no entry stored in dbm for [ENSG00000248367.1]
WARNING, no entry stored in dbm for [ENSG00000228536.3]
WARNING, no entry stored in dbm for [ENSG00000228285.2]
WARNING, no entry stored in dbm for [ENSG00000261241.7]
WARNING, no entry stored in dbm for [ENSG00000176605.9]
WARNING, no entry stored in dbm for [ENSG00000235974.1]
WARNING, no entry stored in dbm for [ENSG00000247675.7]
WARNING, no entry stored in dbm for [ENSG00000175779.4]
WARNING, no entry stored in dbm for [ENSG00000215244.3]
WARNING, no entry stored in dbm for [ENSG00000231566.2]
WARNING, no entry stored in dbm for [ENSG00000248238.2]
WARNING, no entry stored in dbm for [ENSG00000250754.6]
WARNING, no entry stored in dbm for [ENSG00000253490.5]
WARNING, no entry stored in dbm for [ENSG00000233973.7]
WARNING, no entry stored in dbm for [ENSG00000245937.8]
WARNING, no entry stored in dbm for [ENSG00000204588.5]
WARNING, no entry stored in dbm for [ENSG00000225269.3]
WARNING, no entry stored in dbm for [ENSG00000266904.6]
WARNING, no entry stored in dbm for [ENSG00000233237.8]
WARNING, no entry stored in dbm for [ENSG00000232117.2]
WARNING, no entry stored in dbm for [ENSG00000232803.1]
WARNING, no entry stored in dbm for [ENSG00000232117.2]
WARNING, no entry stored in dbm for [ENSG00000232803.1]
WARNING, no entry stored in dbm for [ENSG00000189343.7]
WARNING, no entry stored in dbm for [ENSG00000231203.1]
WARNING, no entry stored in dbm for [ENSG00000249668.1]
WARNING, no entry stored in dbm for [ENSG00000218728.3]
WARNING, no entry stored in dbm for [ENSG00000263647.1]
WARNING, no entry stored in dbm for [ENSG00000286013.1]
WARNING, no entry stored in dbm for [ENSG00000225470.8]
WARNING, no entry stored in dbm for [ENSG00000287872.1]
WARNING, no entry stored in dbm for [ENSG00000259631.1]
WARNING, no entry stored in dbm for [ENSG00000260776.6]
WARNING, no entry stored in dbm for [ENSG00000231304.2]
WARNING, no entry stored in dbm for [ENSG00000254034.2]
WARNING, no entry stored in dbm for [ENSG00000241449.6]
WARNING, no entry stored in dbm for [ENSG00000197558.13]
WARNING, no entry stored in dbm for [ENSG00000224128.1]
WARNING, no entry stored in dbm for [ENSG00000235821.1]
WARNING, no entry stored in dbm for [ENSG00000258676.5]
WARNING, no entry stored in dbm for [ENSG00000237306.1]
WARNING, no entry stored in dbm for [ENSG00000220305.1]
WARNING, no entry stored in dbm for [ENSG00000179362.14]
WARNING, no entry stored in dbm for [ENSG00000231471.1]
WARNING, no entry stored in dbm for [ENSG00000232916.1]
WARNING, no entry stored in dbm for [ENSG00000232916.1]
WARNING, no entry stored in dbm for [ENSG00000231471.1]
WARNING, no entry stored in dbm for [ENSG00000259722.2]
WARNING, no entry stored in dbm for [ENSG00000230519.2]
WARNING, no entry stored in dbm for [ENSG00000124097.7]
WARNING, no entry stored in dbm for [ENSG00000230043.1]
WARNING, no entry stored in dbm for [ENSG00000274471.2]
WARNING, no entry stored in dbm for [ENSG00000276550.4]
WARNING, no entry stored in dbm for [ENSG00000235464.1]
WARNING, no entry stored in dbm for [ENSG00000222020.3]
WARNING, no entry stored in dbm for [ENSG00000227262.3]
WARNING, no entry stored in dbm for [ENSG00000206159.11]
WARNING, no entry stored in dbm for [ENSG00000227695.6]
WARNING, no entry stored in dbm for [ENSG00000224829.3]
WARNING, no entry stored in dbm for [ENSG00000215302.8]
WARNING, no entry stored in dbm for [ENSG00000166104.15]
WARNING, no entry stored in dbm for [ENSG00000166104.15]
WARNING, no entry stored in dbm for [ENSG00000250903.9]
WARNING, no entry stored in dbm for [ENSG00000254349.6]
WARNING, no entry stored in dbm for [ENSG00000215899.3]
WARNING, no entry stored in dbm for [ENSG00000258960.1]
WARNING, no entry stored in dbm for [ENSG00000213362.3]
WARNING, no entry stored in dbm for [ENSG00000218689.2]
WARNING, no entry stored in dbm for [ENSG00000283095.1]
WARNING, no entry stored in dbm for [ENSG00000203801.8]
WARNING, no entry stored in dbm for [ENSG00000215483.11]
WARNING, no entry stored in dbm for [ENSG00000215483.11]
WARNING, no entry stored in dbm for [ENSG00000275340.1]
WARNING, no entry stored in dbm for [ENSG00000214093.3]
WARNING, no entry stored in dbm for [ENSG00000251669.6]
WARNING, no entry stored in dbm for [ENSG00000225684.4]
WARNING, no entry stored in dbm for [ENSG00000235618.8]
WARNING, no entry stored in dbm for [ENSG00000261889.1]
WARNING, no entry stored in dbm for [ENSG00000233922.3]
WARNING, no entry stored in dbm for [ENSG00000230910.4]
WARNING, no entry stored in dbm for [ENSG00000229116.3]
WARNING, no entry stored in dbm for [ENSG00000226833.6]
WARNING, no entry stored in dbm for [ENSG00000234678.2]
WARNING, no entry stored in dbm for [ENSG00000268751.1]
WARNING, no entry stored in dbm for [ENSG00000220505.2]
WARNING, no entry stored in dbm for [ENSG00000186704.9]
WARNING, no entry stored in dbm for [ENSG00000178636.8]
WARNING, no entry stored in dbm for [ENSG00000229358.3]
WARNING, no entry stored in dbm for [ENSG00000237325.3]
WARNING, no entry stored in dbm for [ENSG00000224004.2]
WARNING, no entry stored in dbm for [ENSG00000241352.3]
WARNING, no entry stored in dbm for [ENSG00000232732.11]
WARNING, no entry stored in dbm for [ENSG00000251151.2]
WARNING, no entry stored in dbm for [ENSG00000271162.1]
WARNING, no entry stored in dbm for [ENSG00000257913.2]
WARNING, no entry stored in dbm for [ENSG00000230580.1]
WARNING, no entry stored in dbm for [ENSG00000183444.10]
WARNING, no entry stored in dbm for [ENSG00000286458.1]
WARNING, no entry stored in dbm for [ENSG00000179342.4]
WARNING, no entry stored in dbm for [ENSG00000215908.10]
WARNING, no entry stored in dbm for [ENSG00000283041.1]
WARNING, no entry stored in dbm for [ENSG00000283453.2]
WARNING, no entry stored in dbm for [ENSG00000234497.5]
WARNING, no entry stored in dbm for [ENSG00000215374.6]
WARNING, no entry stored in dbm for [ENSG00000234838.3]
WARNING, no entry stored in dbm for [ENSG00000224404.2]
WARNING, no entry stored in dbm for [ENSG00000196796.5]
WARNING, no entry stored in dbm for [ENSG00000173209.23]
WARNING, no entry stored in dbm for [ENSG00000205771.6]
WARNING, no entry stored in dbm for [ENSG00000225493.1]
WARNING, no entry stored in dbm for [ENSG00000185186.10]
WARNING, no entry stored in dbm for [ENSG00000248508.8]
WARNING, no entry stored in dbm for [ENSG00000249937.8]
WARNING, no entry stored in dbm for [ENSG00000167747.15]
WARNING, no entry stored in dbm for [ENSG00000258144.2]
WARNING, no entry stored in dbm for [ENSG00000186825.6]
WARNING, no entry stored in dbm for [ENSG00000205534.6]
WARNING, no entry stored in dbm for [ENSG00000258130.8]
WARNING, no entry stored in dbm for [ENSG00000264920.2]
WARNING, no entry stored in dbm for [ENSG00000234076.1]
WARNING, no entry stored in dbm for [ENSG00000279022.1]
WARNING, no entry stored in dbm for [ENSG00000245970.2]
WARNING, no entry stored in dbm for [ENSG00000253833.1]
WARNING, no entry stored in dbm for [ENSG00000234709.2]
WARNING, no entry stored in dbm for [ENSG00000203643.3]
WARNING, no entry stored in dbm for [ENSG00000228463.10]
WARNING, no entry stored in dbm for [ENSG00000255345.1]
WARNING, no entry stored in dbm for [ENSG00000255135.4]
WARNING, no entry stored in dbm for [ENSG00000254477.2]
WARNING, no entry stored in dbm for [ENSG00000248546.3]
WARNING, no entry stored in dbm for [ENSG00000249406.3]
WARNING, no entry stored in dbm for [ENSG00000231864.2]
WARNING, no entry stored in dbm for [ENSG00000287557.1]
WARNING, no entry stored in dbm for [ENSG00000169253.3]
WARNING, no entry stored in dbm for [ENSG00000270780.1]
WARNING, no entry stored in dbm for [ENSG00000234589.4]
WARNING, no entry stored in dbm for [ENSG00000286469.1]
WARNING, no entry stored in dbm for [ENSG00000225096.3]
WARNING, no entry stored in dbm for [ENSG00000232499.2]
WARNING, no entry stored in dbm for [ENSG00000287398.1]
WARNING, no entry stored in dbm for [ENSG00000246203.2]
WARNING, no entry stored in dbm for [ENSG00000285424.1]
WARNING, no entry stored in dbm for [ENSG00000282997.1]
WARNING, no entry stored in dbm for [ENSG00000258656.1]
WARNING, no entry stored in dbm for [ENSG00000214195.4]
WARNING, no entry stored in dbm for [ENSG00000286306.1]
WARNING, no entry stored in dbm for [ENSG00000287261.1]
WARNING, no entry stored in dbm for [ENSG00000276805.2]
WARNING, no entry stored in dbm for [ENSG00000273162.1]
WARNING, no entry stored in dbm for [ENSG00000288543.1]
WARNING, no entry stored in dbm for [ENSG00000236740.6]
WARNING, no entry stored in dbm for [ENSG00000260425.1]
WARNING, no entry stored in dbm for [ENSG00000228719.1]
WARNING, no entry stored in dbm for [ENSG00000286652.1]
WARNING, no entry stored in dbm for [ENSG00000247828.8]
WARNING, no entry stored in dbm for [ENSG00000248692.5]
WARNING, no entry stored in dbm for [ENSG00000280143.1]
WARNING, no entry stored in dbm for [ENSG00000253853.3]
WARNING, no entry stored in dbm for [ENSG00000276850.5]
WARNING, no entry stored in dbm for [ENSG00000277089.4]
WARNING, no entry stored in dbm for [ENSG00000249942.1]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000215158.9]
WARNING, no entry stored in dbm for [ENSG00000229930.1]
WARNING, no entry stored in dbm for [ENSG00000229930.1]
WARNING, no entry stored in dbm for [ENSG00000250999.2]
WARNING, no entry stored in dbm for [ENSG00000262488.1]
WARNING, no entry stored in dbm for [ENSG00000243199.1]
WARNING, no entry stored in dbm for [ENSG00000242390.1]
WARNING, no entry stored in dbm for [ENSG00000214942.6]
WARNING, no entry stored in dbm for [ENSG00000277332.1]
WARNING, no entry stored in dbm for [ENSG00000250159.7]
WARNING, no entry stored in dbm for [ENSG00000279439.1]
WARNING, no entry stored in dbm for [ENSG00000251314.2]
WARNING, no entry stored in dbm for [ENSG00000259692.6]
WARNING, no entry stored in dbm for [ENSG00000231646.6]
WARNING, no entry stored in dbm for [ENSG00000268362.6]
WARNING, no entry stored in dbm for [ENSG00000259418.1]
WARNING, no entry stored in dbm for [ENSG00000264151.6]
WARNING, no entry stored in dbm for [ENSG00000262580.5]
WARNING, no entry stored in dbm for [ENSG00000283415.2]
WARNING, no entry stored in dbm for [ENSG00000204745.4]
WARNING, no entry stored in dbm for [ENSG00000266931.2]
WARNING, no entry stored in dbm for [ENSG00000283674.3]
WARNING, no entry stored in dbm for [ENSG00000267002.4]
WARNING, no entry stored in dbm for [ENSG00000185641.6]
WARNING, no entry stored in dbm for [ENSG00000287408.1]
WARNING, no entry stored in dbm for [ENSG00000260005.6]
WARNING, no entry stored in dbm for [ENSG00000213527.5]
WARNING, no entry stored in dbm for [ENSG00000257817.2]
WARNING, no entry stored in dbm for [ENSG00000287677.2]
WARNING, no entry stored in dbm for [ENSG00000259354.5]
WARNING, no entry stored in dbm for [ENSG00000272382.1]
WARNING, no entry stored in dbm for [ENSG00000259172.1]
WARNING, no entry stored in dbm for [ENSG00000242199.1]
WARNING, no entry stored in dbm for [ENSG00000179066.8]
WARNING, no entry stored in dbm for [ENSG00000242858.1]
WARNING, no entry stored in dbm for [ENSG00000287858.1]
WARNING, no entry stored in dbm for [ENSG00000231646.6]
WARNING, no entry stored in dbm for [ENSG00000229852.4]
WARNING, no entry stored in dbm for [ENSG00000234584.1]
WARNING, no entry stored in dbm for [ENSG00000275393.1]
WARNING, no entry stored in dbm for [ENSG00000243302.3]
WARNING, no entry stored in dbm for [ENSG00000253415.1]
WARNING, no entry stored in dbm for [ENSG00000269032.1]
WARNING, no entry stored in dbm for [ENSG00000236679.2]
WARNING, no entry stored in dbm for [ENSG00000286449.1]
WARNING, no entry stored in dbm for [ENSG00000177699.4]
WARNING, no entry stored in dbm for [ENSG00000249839.1]
WARNING, no entry stored in dbm for [ENSG00000240376.1]
WARNING, no entry stored in dbm for [ENSG00000270804.1]
WARNING, no entry stored in dbm for [ENSG00000268884.1]
WARNING, no entry stored in dbm for [ENSG00000253133.2]
WARNING, no entry stored in dbm for [ENSG00000215606.4]
WARNING, no entry stored in dbm for [ENSG00000234352.9]
WARNING, no entry stored in dbm for [ENSG00000267984.1]
WARNING, no entry stored in dbm for [ENSG00000276548.1]
WARNING, no entry stored in dbm for [ENSG00000189149.12]
WARNING, no entry stored in dbm for [ENSG00000248544.2]
WARNING, no entry stored in dbm for [ENSG00000286739.1]
WARNING, no entry stored in dbm for [ENSG00000285904.1]
WARNING, no entry stored in dbm for [ENSG00000279583.1]
WARNING, no entry stored in dbm for [ENSG00000226824.7]
WARNING, no entry stored in dbm for [ENSG00000270576.1]
WARNING, no entry stored in dbm for [ENSG00000267623.3]
WARNING, no entry stored in dbm for [ENSG00000274712.2]
WARNING, no entry stored in dbm for [ENSG00000223561.7]
WARNING, no entry stored in dbm for [ENSG00000205485.13]
WARNING, no entry stored in dbm for [ENSG00000205485.13]
WARNING, no entry stored in dbm for [ENSG00000241057.2]
WARNING, no entry stored in dbm for [ENSG00000239556.4]
WARNING, no entry stored in dbm for [ENSG00000274177.1]
WARNING, no entry stored in dbm for [ENSG00000196656.7]
WARNING, no entry stored in dbm for [ENSG00000228113.7]
WARNING, no entry stored in dbm for [ENSG00000272168.8]
* STAR-Fusion complete. See output: /tmp/nxf.uHnxWQdjOJ/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)