-ctat genome lib [/tmp/nxf.uHnxWQdjOJ/ctat_genome_lib_build_dir] validates. CMD: mkdir -p /tmp/nxf.uHnxWQdjOJ/./_starF_checkpoints CMD: mkdir -p /tmp/nxf.uHnxWQdjOJ/./star-fusion.preliminary -sample contains 208876971 rnaseq fragments * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes --genome_lib_dir /tmp/nxf.uHnxWQdjOJ/ctat_genome_lib_build_dir -J /tmp/nxf.uHnxWQdjOJ/tih_rna_sample_00090_B23WHTKLT4_1.Chimeric.out.junction -O /tmp/nxf.uHnxWQdjOJ/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4 -parsing fusion evidence: /tmp/nxf.uHnxWQdjOJ/tih_rna_sample_00090_B23WHTKLT4_1.Chimeric.out.junction -building interval tree based on /tmp/nxf.uHnxWQdjOJ/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.07 min). -mapping reads to genes [10000], rate=22222.22/min [20000], rate=21052.63/min [30000], rate=21951.22/min [40000], rate=22429.91/min [50000], rate=23437.50/min [60000], rate=23529.41/min [70000], rate=24000.00/min [80000], rate=24242.42/min [90000], rate=24657.53/min [100000], rate=25000.00/min [110000], rate=26506.02/min [120000], rate=26765.80/min [130000], rate=26989.62/min [140000], rate=27361.56/min [150000], rate=27692.31/min [160000], rate=27988.34/min [170000], rate=28412.26/min [180000], rate=28647.21/min [190000], rate=28860.76/min [200000], rate=29126.21/min [210000], rate=29508.20/min [220000], rate=29931.97/min [230000], rate=30329.67/min [240000], rate=31034.48/min [250000], rate=31847.13/min [260000], rate=32231.40/min [270000], rate=32661.29/min [280000], rate=33136.09/min [290000], rate=33655.71/min [300000], rate=34220.53/min [310000], rate=34766.36/min [320000], rate=35229.36/min [330000], rate=34676.01/min [340000], rate=34812.29/min [350000], rate=35353.54/min [360000], rate=35880.40/min [370000], rate=36393.44/min [380000], rate=36893.20/min [390000], rate=37440.00/min [400000], rate=38034.87/min [410000], rate=38557.99/min [420000], rate=38828.97/min [430000], rate=39389.31/min [440000], rate=39699.25/min [450000], rate=40238.45/min [460000], rate=40828.40/min [470000], rate=41348.97/min [480000], rate=41921.40/min [490000], rate=42485.55/min [500000], rate=42075.74/min [510000], rate=41803.28/min [520000], rate=41434.26/min [530000], rate=41085.27/min [540000], rate=40960.81/min [550000], rate=40892.19/min [560000], rate=40875.91/min [570000], rate=40860.22/min [580000], rate=40845.07/min [590000], rate=40830.45/min [600000], rate=40862.66/min [610000], rate=40893.85/min [620000], rate=40924.09/min [630000], rate=41131.66/min [640000], rate=41201.72/min [650000], rate=41269.84/min [660000], rate=40993.79/min [670000], rate=41188.52/min [680000], rate=41337.39/min [690000], rate=41482.97/min [700000], rate=41501.98/min [710000], rate=41040.46/min [720000], rate=40793.20/min [730000], rate=40782.12/min [740000], rate=40771.35/min [750000], rate=40946.31/min [760000], rate=41081.08/min [770000], rate=41213.20/min [780000], rate=41160.95/min [790000], rate=41181.58/min [800000], rate=41379.31/min [810000], rate=41573.99/min [820000], rate=41730.28/min [830000], rate=42025.32/min [840000], rate=42317.38/min [850000], rate=42606.52/min [860000], rate=42964.20/min [870000], rate=43247.72/min [880000], rate=43528.44/min [890000], rate=43842.36/min [900000], rate=43973.94/min [910000], rate=44139.05/min [920000], rate=44301.77/min [930000], rate=44497.61/min [940000], rate=44690.97/min [950000], rate=44846.58/min [960000], rate=45000.00/min [970000], rate=45221.45/min [980000], rate=45475.64/min [990000], rate=45692.31/min [1000000], rate=45906.66/min [1010000], rate=46013.67/min [1020000], rate=46328.54/min [1030000], rate=46571.21/min [1040000], rate=46811.70/min [1050000], rate=47050.04/min [1060000], rate=47286.25/min [1070000], rate=47485.21/min [1080000], rate=47893.57/min [1090000], rate=48230.09/min [1100000], rate=48140.04/min [1110000], rate=48506.92/min [1120000], rate=48908.30/min [1130000], rate=49201.74/min [1140000], rate=49386.28/min [1150000], rate=49533.38/min [1160000], rate=49785.41/min [1170000], rate=50071.33/min [1180000], rate=50355.62/min [1190000], rate=50566.57/min [1200000], rate=50811.57/min [1210000], rate=50983.15/min [1220000], rate=51188.81/min [1230000], rate=51500.35/min [1240000], rate=51630.81/min [1250000], rate=51939.06/min [1260000], rate=52246.03/min [1270000], rate=52479.34/min [1280000], rate=52566.74/min [1290000], rate=52760.74/min [1300000], rate=53061.22/min [1310000], rate=53396.74/min [1320000], rate=53694.92/min [1330000], rate=53955.38/min [1340000], rate=54324.32/min [1350000], rate=54619.02/min [1360000], rate=54912.52/min [1370000], rate=55130.78/min [1380000], rate=55384.62/min [1390000], rate=55415.28/min [1400000], rate=55482.17/min [1410000], rate=55841.58/min [1420000], rate=56200.53/min [1430000], rate=56559.00/min [1440000], rate=56917.00/min [1450000], rate=57011.80/min [1460000], rate=56846.20/min [1470000], rate=57013.57/min [1480000], rate=57179.65/min [1490000], rate=57270.98/min [1500000], rate=57544.76/min [1510000], rate=57743.79/min [1520000], rate=57941.55/min [1530000], rate=58285.71/min [1540000], rate=58592.26/min [1550000], rate=58749.21/min [1560000], rate=59053.63/min [1570000], rate=59432.18/min [1580000], rate=59810.73/min [1590000], rate=60151.32/min [1600000], rate=60529.63/min [1610000], rate=60869.57/min [1620000], rate=61247.64/min [1630000], rate=61470.77/min [1640000], rate=61654.14/min [1650000], rate=61836.35/min [1660000], rate=62094.76/min [1670000], rate=62352.21/min [1680000], rate=62453.53/min [1690000], rate=62553.98/min [1700000], rate=62692.07/min [1710000], rate=62829.15/min [1720000], rate=62965.22/min [1730000], rate=63100.30/min [1740000], rate=63272.73/min [1750000], rate=63405.80/min [1760000], rate=63614.46/min [1770000], rate=63707.26/min [1780000], rate=63723.15/min [1790000], rate=63776.72/min [1800000], rate=63754.43/min [1810000], rate=63844.80/min [1820000], rate=63897.02/min [1830000], rate=64060.68/min [1840000], rate=64148.75/min [1850000], rate=64236.11/min [1860000], rate=64397.00/min [1870000], rate=64482.76/min [1880000], rate=64604.81/min [1890000], rate=64176.57/min [1900000], rate=63901.35/min [1910000], rate=64022.35/min [1920000], rate=64071.19/min [1930000], rate=64155.12/min [1940000], rate=63850.80/min [1950000], rate=63864.63/min [1960000], rate=63464.65/min [1970000], rate=63073.64/min [1980000], rate=62691.29/min [1990000], rate=62447.70/min [2000000], rate=61951.47/min [2010000], rate=61846.15/min [2020000], rate=61710.79/min [2030000], rate=61360.20/min [2040000], rate=61108.34/min [2050000], rate=60264.58/min [2060000], rate=59970.89/min [2070000], rate=59769.01/min [2080000], rate=59712.92/min [2090000], rate=59515.90/min [2100000], rate=59433.96/min [2110000], rate=58993.48/min [2120000], rate=58916.16/min [2130000], rate=58866.88/min [2140000], rate=58845.10/min [2150000], rate=58850.36/min [2160000], rate=58855.59/min [2170000], rate=58860.76/min [2180000], rate=58892.39/min [2190000], rate=58923.77/min [2200000], rate=59007.60/min [2210000], rate=59143.62/min -building interval tree based on /tmp/nxf.uHnxWQdjOJ/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.07 min). -mapping reads to genes [10000], rate=120000.00/min [20000], rate=133333.33/min [30000], rate=138461.54/min [40000], rate=114285.71/min [50000], rate=76923.08/min [60000], rate=64285.71/min [70000], rate=57534.25/min [80000], rate=55172.41/min [90000], rate=52941.18/min [100000], rate=52173.91/min [110000], rate=51562.50/min [120000], rate=51428.57/min [130000], rate=52000.00/min [140000], rate=52173.91/min [150000], rate=52631.58/min [160000], rate=53333.33/min [170000], rate=54255.32/min [180000], rate=55384.62/min [190000], rate=56157.64/min [200000], rate=57416.27/min [210000], rate=57013.57/min [220000], rate=55000.00/min [230000], rate=52671.76/min [240000], rate=51428.57/min [250000], rate=50505.05/min [260000], rate=49523.81/min [270000], rate=49390.24/min [280000], rate=48837.21/min [290000], rate=49014.08/min [300000], rate=49180.33/min [310000], rate=49336.87/min [320000], rate=49612.40/min [330000], rate=49874.06/min [340000], rate=50370.37/min [350000], rate=50724.64/min [360000], rate=51551.31/min [370000], rate=51990.63/min [380000], rate=52534.56/min [390000], rate=53061.22/min [400000], rate=53571.43/min [410000], rate=54065.93/min [420000], rate=54663.77/min [430000], rate=55128.21/min [440000], rate=55578.95/min [450000], rate=56133.06/min [460000], rate=56673.51/min [470000], rate=57317.07/min [480000], rate=57947.69/min [490000], rate=57421.88/min [500000], rate=56497.18/min [510000], rate=55334.54/min [520000], rate=54929.58/min [530000], rate=54639.18/min [540000], rate=54180.60/min [550000], rate=54009.82/min [560000], rate=53846.15/min [570000], rate=53521.13/min [580000], rate=53129.77/min [590000], rate=52835.82/min [600000], rate=52863.44/min [610000], rate=52586.21/min [620000], rate=52320.68/min [630000], rate=52066.12/min [640000], rate=51962.11/min [650000], rate=51792.83/min [660000], rate=51697.13/min [670000], rate=51538.46/min [680000], rate=51450.19/min [690000], rate=51364.76/min [700000], rate=51407.59/min [710000], rate=51449.28/min [720000], rate=51551.31/min [730000], rate=51590.11/min [740000], rate=51748.25/min [750000], rate=51903.11/min [760000], rate=51525.42/min [770000], rate=51910.11/min [780000], rate=51827.24/min [790000], rate=51354.28/min [800000], rate=50847.46/min [810000], rate=50996.85/min [820000], rate=51356.99/min [830000], rate=51552.80/min [840000], rate=51905.25/min [850000], rate=51256.28/min [860000], rate=50489.24/min [870000], rate=50192.31/min [880000], rate=49764.37/min [890000], rate=49536.18/min [900000], rate=49360.15/min [910000], rate=49189.19/min [920000], rate=48677.25/min [930000], rate=48648.65/min [940000], rate=48578.81/min [950000], rate=48551.96/min [960000], rate=48566.61/min [970000], rate=48419.30/min [980000], rate=48117.84/min [990000], rate=47330.68/min [1000000], rate=46911.65/min [1010000], rate=46508.06/min [1020000], rate=46433.99/min [1030000], rate=46292.13/min [1040000], rate=46051.66/min [1050000], rate=46120.06/min [1060000], rate=46254.55/min [1070000], rate=46387.28/min [1080000], rate=46518.31/min [1090000], rate=46514.94/min [1100000], rate=46775.34/min [1110000], rate=46967.56/min [1120000], rate=47124.82/min [1130000], rate=47280.33/min [1140000], rate=47302.90/min [1150000], rate=47487.96/min [1160000], rate=47703.91/min [1170000], rate=47983.60/min [1180000], rate=48228.88/min [1190000], rate=48472.51/min [1200000], rate=48681.54/min [1210000], rate=48757.56/min [1220000], rate=48670.21/min [1230000], rate=48172.32/min [1240000], rate=48217.76/min [1250000], rate=48200.51/min [1260000], rate=48275.86/min [1270000], rate=48319.59/min [1280000], rate=48362.72/min [1290000], rate=48465.87/min [1300000], rate=48537.65/min [1310000], rate=48518.52/min [1320000], rate=48175.18/min [1330000], rate=48101.27/min [1340000], rate=48230.35/min [1350000], rate=48416.02/min [1360000], rate=48571.43/min [1370000], rate=48783.38/min [1380000], rate=48994.08/min [1390000], rate=49232.59/min [1400000], rate=49528.30/min [1410000], rate=49823.32/min [1420000], rate=50117.65/min [1430000], rate=50381.68/min [1440000], rate=50644.78/min [1450000], rate=50936.77/min [1460000], rate=51198.13/min [1470000], rate=51518.69/min [1480000], rate=51748.25/min [1490000], rate=52006.98/min [1500000], rate=52264.81/min [1510000], rate=52552.20/min [1520000], rate=52838.93/min [1530000], rate=53094.27/min [1540000], rate=53348.73/min [1550000], rate=53602.31/min [1560000], rate=53886.01/min [1570000], rate=54169.06/min [1580000], rate=54420.21/min [1590000], rate=54670.49/min [1600000], rate=54919.91/min [1610000], rate=55200.00/min [1620000], rate=55479.45/min [1630000], rate=55758.27/min [1640000], rate=55972.70/min [1650000], rate=56250.00/min [1660000], rate=56494.61/min [1670000], rate=56706.28/min [1680000], rate=56917.00/min [1690000], rate=57094.59/min [1700000], rate=57271.20/min [1710000], rate=57222.53/min [1720000], rate=57048.09/min [1730000], rate=56628.48/min [1740000], rate=56219.71/min [1750000], rate=56179.78/min [1760000], rate=56140.35/min [1770000], rate=56071.81/min [1780000], rate=56033.58/min [1790000], rate=56083.55/min [1800000], rate=56074.77/min [1810000], rate=56095.04/min [1820000], rate=56115.11/min [1830000], rate=56106.29/min [1840000], rate=56154.63/min [1850000], rate=56231.00/min [1860000], rate=56306.76/min [1870000], rate=56410.26/min [1880000], rate=56484.73/min [1890000], rate=56586.83/min [1900000], rate=56688.21/min [1910000], rate=56958.25/min [1920000], rate=57228.02/min [1930000], rate=57412.00/min [1940000], rate=57538.31/min [1950000], rate=57663.87/min [1960000], rate=57817.11/min [1970000], rate=57969.59/min [1980000], rate=58121.33/min [1990000], rate=58243.90/min [2000000], rate=58394.16/min [2010000], rate=58430.23/min [2020000], rate=58381.50/min [2030000], rate=58389.26/min [2040000], rate=58424.82/min [2050000], rate=58515.70/min [2060000], rate=58495.03/min [2070000], rate=58502.12/min [2080000], rate=58536.59/min [2090000], rate=58570.76/min [2100000], rate=58577.41/min [2110000], rate=58314.14/min [2120000], rate=58055.68/min [2130000], rate=57854.23/min [2140000], rate=57681.94/min [2150000], rate=57563.59/min [2160000], rate=57728.29/min [2170000], rate=57815.28/min [2180000], rate=57621.15/min [2190000], rate=57480.31/min [2200000], rate=57391.30/min -building interval tree based on /tmp/nxf.uHnxWQdjOJ/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.08 min). -mapping reads to genes [10000], rate=42857.14/min [20000], rate=42857.14/min [30000], rate=43902.44/min [40000], rate=45283.02/min [50000], rate=47619.05/min [60000], rate=43902.44/min [70000], rate=46153.85/min [80000], rate=48484.85/min [90000], rate=50943.40/min [100000], rate=53097.35/min [110000], rate=55000.00/min [120000], rate=57142.86/min [130000], rate=53424.66/min [140000], rate=49411.76/min [150000], rate=46391.75/min [160000], rate=43835.62/min [170000], rate=43037.97/min [180000], rate=41538.46/min [190000], rate=40860.22/min [200000], rate=40404.04/min [210000], rate=40255.59/min [220000], rate=39639.64/min [230000], rate=39655.17/min [240000], rate=39344.26/min [250000], rate=39370.08/min [260000], rate=39195.98/min [270000], rate=39130.43/min [280000], rate=39069.77/min [290000], rate=39189.19/min [300000], rate=39301.31/min [310000], rate=39490.45/min [320000], rate=39834.02/min [330000], rate=40243.90/min [340000], rate=40718.56/min [350000], rate=41176.47/min [360000], rate=41618.50/min [370000], rate=42205.32/min [380000], rate=42776.74/min [390000], rate=43413.73/min [400000], rate=43956.04/min [410000], rate=44484.63/min [420000], rate=45080.50/min [430000], rate=45663.72/min [440000], rate=46397.19/min [450000], rate=46956.52/min [460000], rate=47586.21/min [470000], rate=48205.13/min [480000], rate=48403.36/min [490000], rate=48514.85/min [500000], rate=48780.49/min [510000], rate=49117.17/min [520000], rate=49445.32/min [530000], rate=49921.51/min [540000], rate=50388.80/min [550000], rate=50847.46/min [560000], rate=51297.71/min [570000], rate=51428.57/min [580000], rate=51101.32/min [590000], rate=50862.07/min [600000], rate=50704.23/min [610000], rate=50692.52/min [620000], rate=50681.20/min [630000], rate=50738.26/min [640000], rate=50928.38/min [650000], rate=51047.12/min [660000], rate=51228.98/min [670000], rate=51538.46/min [680000], rate=51776.65/min [690000], rate=52075.47/min [700000], rate=52500.00/min [710000], rate=52788.10/min [720000], rate=53006.13/min [730000], rate=53414.63/min [740000], rate=53883.50/min [750000], rate=54413.54/min [760000], rate=55006.03/min [770000], rate=55329.34/min [780000], rate=55516.01/min [790000], rate=55052.26/min [800000], rate=54360.14/min [810000], rate=54241.07/min [820000], rate=54125.41/min [830000], rate=53954.50/min [840000], rate=53903.74/min [850000], rate=53854.28/min [860000], rate=53526.97/min [870000], rate=53428.86/min [880000], rate=53279.52/min [890000], rate=53453.45/min [900000], rate=53677.93/min [910000], rate=53846.15/min [920000], rate=54064.64/min [930000], rate=54385.96/min [940000], rate=54335.26/min [950000], rate=54545.45/min [960000], rate=54390.93/min [970000], rate=53739.61/min [980000], rate=53357.53/min [990000], rate=52566.37/min [1000000], rate=52173.91/min [1010000], rate=52061.86/min [1020000], rate=52085.11/min [1030000], rate=52372.88/min [1040000], rate=51913.48/min [1050000], rate=51177.90/min [1060000], rate=50798.72/min [1070000], rate=49961.09/min [1080000], rate=49769.59/min [1090000], rate=49135.99/min [1100000], rate=49034.18/min [1110000], rate=48719.82/min [1120000], rate=48625.18/min [1130000], rate=48602.15/min [1140000], rate=48648.65/min [1150000], rate=48660.08/min [1160000], rate=48773.65/min [1170000], rate=48817.80/min [1180000], rate=48895.03/min [1190000], rate=48971.19/min [1200000], rate=48946.30/min [1210000], rate=49054.05/min [1220000], rate=49127.52/min [1230000], rate=49265.69/min [1240000], rate=49304.17/min [1250000], rate=49374.59/min [1260000], rate=49250.81/min [1270000], rate=49129.59/min [1280000], rate=48792.88/min [1290000], rate=48194.27/min [1300000], rate=48207.66/min [1310000], rate=48309.77/min [1320000], rate=48381.19/min [1330000], rate=48481.17/min [1340000], rate=48550.72/min [1350000], rate=48677.88/min [1360000], rate=48774.66/min [1370000], rate=48899.46/min [1380000], rate=48849.56/min [1390000], rate=48629.74/min [1400000], rate=48470.86/min [1410000], rate=48425.87/min [1420000], rate=48299.32/min [1430000], rate=48175.18/min [1440000], rate=48160.54/min [1450000], rate=48119.47/min [1460000], rate=48317.71/min [1470000], rate=48488.18/min [1480000], rate=48684.21/min [1490000], rate=48586.96/min [1500000], rate=48309.18/min [1510000], rate=48063.66/min [1520000], rate=47848.90/min [1530000], rate=47564.77/min [1540000], rate=47384.62/min [1550000], rate=47088.61/min [1560000], rate=46405.55/min [1570000], rate=45705.97/min [1580000], rate=45078.46/min [1590000], rate=44372.09/min [1600000], rate=43895.75/min [1610000], rate=43396.23/min [1620000], rate=42857.14/min [1630000], rate=42651.55/min [1640000], rate=42689.80/min [1650000], rate=42709.23/min [1660000], rate=42728.44/min [1670000], rate=42747.44/min [1680000], rate=42802.55/min [1690000], rate=42820.95/min [1700000], rate=42857.14/min [1710000], rate=42892.98/min [1720000], rate=42982.09/min [1730000], rate=43052.68/min [1740000], rate=43122.68/min [1750000], rate=43174.34/min [1760000], rate=43296.43/min [1770000], rate=43400.08/min [1780000], rate=43503.05/min [1790000], rate=43569.98/min [1800000], rate=43654.00/min [1810000], rate=43719.81/min [1820000], rate=43785.08/min [1830000], rate=43849.84/min [1840000], rate=43931.56/min [1850000], rate=43995.24/min [1860000], rate=44075.83/min [1870000], rate=44103.77/min [1880000], rate=44148.73/min [1890000], rate=44176.08/min [1900000], rate=44254.66/min [1910000], rate=44026.12/min [1920000], rate=43869.00/min [1930000], rate=43747.64/min [1940000], rate=43628.19/min [1950000], rate=43640.43/min [1960000], rate=43733.73/min [1970000], rate=43826.47/min [1980000], rate=43934.91/min [1990000], rate=44059.04/min [2000000], rate=44182.62/min [2010000], rate=44289.39/min [2020000], rate=44428.15/min [2030000], rate=44550.11/min [2040000], rate=44671.53/min [2050000], rate=44808.74/min [2060000], rate=44896.48/min [2070000], rate=45000.00/min [2080000], rate=45201.01/min [2090000], rate=45401.88/min [2100000], rate=45487.36/min [2110000], rate=45588.76/min [2120000], rate=45673.25/min [2130000], rate=45790.04/min [2140000], rate=45889.92/min [2150000], rate=45989.30/min [2160000], rate=45746.56/min [2170000], rate=45271.21/min [2180000], rate=45087.90/min [2190000], rate=44938.44/min -building interval tree based on /tmp/nxf.uHnxWQdjOJ/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.07 min). -mapping reads to genes [10000], rate=75000.00/min [20000], rate=75000.00/min [30000], rate=75000.00/min [40000], rate=85714.29/min [50000], rate=96774.19/min [60000], rate=94736.84/min [70000], rate=105000.00/min [80000], rate=120000.00/min [90000], rate=120000.00/min [100000], rate=130434.78/min [110000], rate=143478.26/min [120000], rate=156521.74/min [130000], rate=169565.22/min [140000], rate=182608.70/min [150000], rate=195652.17/min [160000], rate=204255.32/min [170000], rate=208163.27/min [180000], rate=207692.31/min [190000], rate=203571.43/min [200000], rate=200000.00/min [210000], rate=206557.38/min [220000], rate=216393.44/min [230000], rate=222580.65/min [240000], rate=232258.06/min [250000], rate=238095.24/min [260000], rate=222857.14/min [270000], rate=216000.00/min [280000], rate=212658.23/min [290000], rate=197727.27/min [300000], rate=197802.20/min [310000], rate=197872.34/min [320000], rate=193939.39/min [330000], rate=198000.00/min [340000], rate=201980.20/min [350000], rate=200000.00/min [360000], rate=203773.58/min [370000], rate=209433.96/min [380000], rate=215094.34/min [390000], rate=220754.72/min [400000], rate=226415.09/min [410000], rate=229906.54/min [420000], rate=235514.02/min [430000], rate=234545.45/min [440000], rate=231578.95/min [450000], rate=225000.00/min [460000], rate=226229.51/min [470000], rate=229268.29/min [480000], rate=232258.06/min [490000], rate=237096.77/min [500000], rate=241935.48/min [510000], rate=239062.50/min [520000], rate=234586.47/min [530000], rate=230434.78/min [540000], rate=223448.28/min [550000], rate=221476.51/min [560000], rate=221052.63/min [570000], rate=217834.39/min [580000], rate=220253.16/min [590000], rate=217177.91/min [600000], rate=220858.90/min [610000], rate=224539.88/min [620000], rate=226829.27/min [630000], rate=230487.80/min [640000], rate=234146.34/min [650000], rate=237804.88/min [660000], rate=235714.29/min [670000], rate=233720.93/min [680000], rate=233142.86/min [690000], rate=233898.31/min [700000], rate=235955.06/min [710000], rate=232786.89/min [720000], rate=229787.23/min [730000], rate=228125.00/min [740000], rate=222000.00/min [750000], rate=220588.24/min [760000], rate=220289.86/min [770000], rate=217924.53/min [780000], rate=219718.31/min [790000], rate=217431.19/min [800000], rate=220183.49/min [810000], rate=222935.78/min [820000], rate=225688.07/min [830000], rate=228440.37/min [840000], rate=231192.66/min [850000], rate=232876.71/min [860000], rate=231390.13/min [870000], rate=229955.95/min [880000], rate=229565.22/min [890000], rate=231168.83/min [900000], rate=225000.00/min [910000], rate=186348.12/min [920000], rate=157264.96/min [930000], rate=136097.56/min [940000], rate=122077.92/min [950000], rate=111764.71/min [960000], rate=103783.78/min [970000], rate=97000.00/min [980000], rate=90600.92/min [990000], rate=85838.15/min [1000000], rate=82079.34/min [1010000], rate=78294.57/min [1020000], rate=75276.75/min [1030000], rate=72450.18/min [1040000], rate=69876.82/min [1050000], rate=67235.86/min [1060000], rate=65297.74/min [1070000], rate=63126.84/min [1080000], rate=61132.08/min [1090000], rate=59185.52/min [1100000], rate=57341.44/min [1110000], rate=55778.89/min [1120000], rate=54812.40/min [1130000], rate=53937.95/min [1140000], rate=53064.39/min [1150000], rate=52551.41/min [1160000], rate=51593.77/min [1170000], rate=50576.37/min [1180000], rate=49545.14/min [1190000], rate=49072.16/min [1200000], rate=48257.37/min [1210000], rate=47112.26/min [1220000], rate=46212.12/min [1230000], rate=45981.31/min [1240000], rate=45644.17/min [1250000], rate=45344.62/min [1260000], rate=45161.29/min [1270000], rate=44849.91/min [1280000], rate=44651.16/min [1290000], rate=44636.68/min [1300000], rate=44622.43/min [1310000], rate=44659.09/min [1320000], rate=44619.72/min [1330000], rate=44630.87/min [1340000], rate=44592.35/min [1350000], rate=44432.25/min [1360000], rate=44420.25/min [1370000], rate=44408.43/min [1380000], rate=44160.00/min [1390000], rate=44244.03/min [1400000], rate=44350.58/min [1410000], rate=44456.12/min [1420000], rate=44560.67/min [1430000], rate=44664.24/min [1440000], rate=44444.44/min [1450000], rate=44140.03/min [1460000], rate=44220.09/min [1470000], rate=44232.70/min [1480000], rate=44377.81/min [1490000], rate=44323.25/min [1500000], rate=44269.55/min [1510000], rate=44390.00/min [1520000], rate=43973.00/min [1530000], rate=43610.45/min [1540000], rate=43380.28/min [1550000], rate=43215.61/min [1560000], rate=43213.30/min [1570000], rate=43310.34/min [1580000], rate=43386.73/min [1590000], rate=43482.22/min [1600000], rate=43576.94/min [1610000], rate=43730.19/min [1620000], rate=43882.62/min [1630000], rate=44014.40/min [1640000], rate=44125.56/min [1650000], rate=44255.70/min [1660000], rate=44404.81/min [1670000], rate=44533.33/min [1680000], rate=44661.05/min [1690000], rate=44807.78/min [1700000], rate=44776.12/min [1710000], rate=44862.26/min [1720000], rate=44830.58/min [1730000], rate=44779.98/min [1740000], rate=44577.28/min [1750000], rate=44359.95/min [1760000], rate=43781.09/min [1770000], rate=43613.96/min [1780000], rate=43432.29/min [1790000], rate=43341.40/min [1800000], rate=43356.08/min [1810000], rate=43387.93/min [1820000], rate=43419.48/min [1830000], rate=43347.81/min [1840000], rate=43311.10/min [1850000], rate=43308.62/min [1860000], rate=43322.98/min [1870000], rate=43337.20/min [1880000], rate=43301.34/min [1890000], rate=43265.93/min [1900000], rate=43100.19/min [1910000], rate=42921.35/min [1920000], rate=42905.03/min [1930000], rate=42809.61/min [1940000], rate=42778.39/min [1950000], rate=42794.44/min [1960000], rate=42794.76/min [1970000], rate=42810.58/min [1980000], rate=42733.81/min [1990000], rate=42719.14/min [2000000], rate=42704.63/min [2010000], rate=42675.16/min [2020000], rate=42496.49/min [2030000], rate=42365.22/min [2040000], rate=42236.02/min [2050000], rate=42123.29/min [2060000], rate=41969.44/min [2070000], rate=41916.98/min [2080000], rate=41879.19/min [2090000], rate=41841.84/min [2100000], rate=41804.91/min [2110000], rate=41809.78/min [2120000], rate=41800.85/min [2130000], rate=41792.02/min [2140000], rate=41837.73/min [2150000], rate=41842.36/min [2160000], rate=41846.95/min [2170000], rate=41824.61/min [2180000], rate=41842.61/min [2190000], rate=41847.13/min [2200000], rate=41851.62/min [2210000], rate=41869.28/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads -J /tmp/nxf.uHnxWQdjOJ/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --genome_lib_dir /tmp/nxf.uHnxWQdjOJ/ctat_genome_lib_build_dir --filt_file /tmp/nxf.uHnxWQdjOJ/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail -M 50 > /tmp/nxf.uHnxWQdjOJ/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -parsing /tmp/nxf.uHnxWQdjOJ/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info. 0.00 reads per min processed... 12000000.00 reads per min processed... 18000000.00 reads per min processed... 24000000.00 reads per min processed... 15000000.00 reads per min processed... 18000000.00 reads per min processed... 14000000.00 reads per min processed... 16000000.00 reads per min processed... 13500000.00 reads per min processed... 10000000.00 reads per min processed... 8250000.00 reads per min processed... 7200000.00 reads per min processed... 7090909.09 reads per min processed... 6461538.46 reads per min processed... 6000000.00 reads per min processed... 6000000.00 reads per min processed... 5666666.67 reads per min processed... 5400000.00 reads per min processed... 5181818.18 reads per min processed... 5000000.00 reads per min processed... 5040000.00 reads per min processed... 4888888.89 reads per min processed... 4758620.69 reads per min processed... 4645161.29 reads per min processed... 4687500.00 reads per min processed... 4588235.29 reads per min processed... 4500000.00 reads per min processed... 4421052.63 reads per min processed... 4350000.00 reads per min processed... 4285714.29 reads per min processed... 4227272.73 reads per min processed... 4173913.04 reads per min processed... 4125000.00 reads per min processed... 4080000.00 reads per min processed... 4038461.54 reads per min processed... 4075471.70 reads per min processed... 4036363.64 reads per min processed... 4071428.57 reads per min processed... 4034482.76 reads per min processed... 4000000.00 reads per min processed... 4032786.89 reads per min processed... 4000000.00 reads per min processed... 3969230.77 reads per min processed... 4000000.00 reads per min processed... 4029850.75 reads per min processed... 4000000.00 reads per min processed... 4028571.43 reads per min processed... 4056338.03 reads per min processed... 4140845.07 reads per min processed... 4166666.67 reads per min processed... 4191780.82 reads per min processed... 4273972.60 reads per min processed... 4240000.00 reads per min processed... 4263157.89 reads per min processed... 4230769.23 reads per min processed... 4200000.00 reads per min processed... 4170731.71 reads per min processed... 4192771.08 reads per min processed... 4164705.88 reads per min processed... 4186046.51 reads per min processed... 4159090.91 reads per min processed... 4133333.33 reads per min processed... 4108695.65 reads per min processed... 4129032.26 reads per min processed... 4105263.16 reads per min processed... 4082474.23 reads per min processed... 4060606.06 reads per min processed... 4080000.00 reads per min processed... 4058823.53 reads per min processed... 4038461.54 reads per min processed... 4057142.86 reads per min processed... 4037383.18 reads per min processed... 4055555.56 reads per min processed... 4036363.64 reads per min processed... 4017857.14 reads per min processed... done. * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict -J /tmp/nxf.uHnxWQdjOJ/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -O /tmp/nxf.uHnxWQdjOJ/./star-fusion.preliminary/star-fusion -parsing fusion evidence: /tmp/nxf.uHnxWQdjOJ/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -outputting fusion candidates to file: /tmp/nxf.uHnxWQdjOJ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter --fusion_preds /tmp/nxf.uHnxWQdjOJ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary -J /tmp/nxf.uHnxWQdjOJ/tih_rna_sample_00090_B23WHTKLT4_1.Chimeric.out.junction --tmpdir /tmp --min_junction_reads 0 --min_sum_frags 1 --require_LDAS 0 --max_promiscuity 10 --min_pct_dom_promiscuity 20 --min_novel_junction_support 1 --min_alt_pct_junction 10 --aggregate_novel_junction_dist 5 --min_spanning_frags_only 1 --genome_lib_dir /tmp/nxf.uHnxWQdjOJ/ctat_genome_lib_build_dir --out_prefix /tmp/nxf.uHnxWQdjOJ/./star-fusion.preliminary/star-fusion CMD: mkdir -p /tmp/nxf.uHnxWQdjOJ/./star-fusion.preliminary/star-fusion.filter.intermediates_dir EM: Starting log likelihood: -275430.757408 EM: Round [1] log likelihood: -275208.607297 EM: Round [2] log likelihood: -275126.182554 EM: Round [3] log likelihood: -275086.482903 EM: Round [4] log likelihood: -275065.065479 EM: Round [5] log likelihood: -275052.882609 EM: Round [6] log likelihood: -275045.703886 EM: Round [7] log likelihood: -275041.331633 EM: Round [8] log likelihood: -275038.576676 EM: Round [9] log likelihood: -275036.779736 EM: Round [10] log likelihood: -275035.566953 EM: Round [11] log likelihood: -275034.721231 EM: Round [12] log likelihood: -275034.113267 EM: Round [13] log likelihood: -275033.663955 EM: Round [14] log likelihood: -275033.323562 EM: Round [15] log likelihood: -275033.059958 EM: Round [16] log likelihood: -275032.851838 EM: Round [17] log likelihood: -275032.684711 EM: Round [18] log likelihood: -275032.548496 EM: Round [19] log likelihood: -275032.436019 EM: Round [20] log likelihood: -275032.342077 EM: Round [21] log likelihood: -275032.262824 EM: Round [22] log likelihood: -275032.195370 EM: Round [23] log likelihood: -275032.137510 EM: Round [24] log likelihood: -275032.087537 EM: Round [25] log likelihood: -275032.044113 EM: Round [26] log likelihood: -275032.006176 EM: Round [27] log likelihood: -275031.972873 EM: Round [28] log likelihood: -275031.943513 EM: Round [29] log likelihood: -275031.917530 EM: Round [30] log likelihood: -275031.894455 EM: Round [31] log likelihood: -275031.873900 EM: Round [32] log likelihood: -275031.855538 EM: Round [33] log likelihood: -275031.839092 EM: Round [34] log likelihood: -275031.824328 EM: Round [35] log likelihood: -275031.811045 EM: Round [36] log likelihood: -275031.799070 EM: Round [37] log likelihood: -275031.788253 EM: Round [38] log likelihood: -275031.778466 EM: Round [39] log likelihood: -275031.769596 EM: Round [40] log likelihood: -275031.761543 EM: Round [41] log likelihood: -275031.754222 EM: Round [42] log likelihood: -275031.747556 EM: Round [43] log likelihood: -275031.741477 EM: Round [44] log likelihood: -275031.735927 EM: Round [45] log likelihood: -275031.730852 EM: Round [46] log likelihood: -275031.726205 EM: Round [47] log likelihood: -275031.721945 EM: Round [48] log likelihood: -275031.718035 EM: Round [49] log likelihood: -275031.714440 EM: Round [50] log likelihood: -275031.711131 EM: Round [51] log likelihood: -275031.708082 EM: Round [52] log likelihood: -275031.705268 EM: Round [53] log likelihood: -275031.702668 EM: Round [54] log likelihood: -275031.700261 EM: Round [55] log likelihood: -275031.698032 EM: Round [56] log likelihood: -275031.695964 EM: Round [57] log likelihood: -275031.694042 EM: Round [58] log likelihood: -275031.692255 EM: Round [59] log likelihood: -275031.690589 EM: Round [60] log likelihood: -275031.689036 EM: Round [61] log likelihood: -275031.687585 EM: Round [62] log likelihood: -275031.686227 EM: Round [63] log likelihood: -275031.684956 EM: Round [64] log likelihood: -275031.683763 EM: Round [65] log likelihood: -275031.682642 EM: Round [66] log likelihood: -275031.681588 EM: Round [67] log likelihood: -275031.680595 EM: Round [68] log likelihood: -275031.679659 EM: Round [69] log likelihood: -275031.678774 EM: Round [70] log likelihood: -275031.677937 EM: Round [71] log likelihood: -275031.677145 EM: Round [72] log likelihood: -275031.676393 EM: Round [73] log likelihood: -275031.675680 EM: Round [74] log likelihood: -275031.675001 EM: Round [75] log likelihood: -275031.674355 EM: Round [76] log likelihood: -275031.673739 EM: Round [77] log likelihood: -275031.673152 EM: Round [78] log likelihood: -275031.672591 EM: Round [79] log likelihood: -275031.672054 EM: Round [80] log likelihood: -275031.671540 EM: Round [81] log likelihood: -275031.671047 EM: Round [82] log likelihood: -275031.670574 EM: Round [83] log likelihood: -275031.670120 EM: Round [84] log likelihood: -275031.669684 EM: Round [85] log likelihood: -275031.669264 EM: Round [86] log likelihood: -275031.668859 EM: Round [87] log likelihood: -275031.668469 EM: Round [88] log likelihood: -275031.668093 EM: Round [89] log likelihood: -275031.667729 EM: Round [90] log likelihood: -275031.667379 EM: Round [91] log likelihood: -275031.667039 EM: Round [92] log likelihood: -275031.666711 EM: Round [93] log likelihood: -275031.666393 EM: Round [94] log likelihood: -275031.666085 EM: Round [95] log likelihood: -275031.665786 EM: Round [96] log likelihood: -275031.665497 EM: Round [97] log likelihood: -275031.665216 EM: Round [98] log likelihood: -275031.664943 EM: Round [99] log likelihood: -275031.664678 EM: Round [100] log likelihood: -275031.664421 EM: Round [101] log likelihood: -275031.664170 EM: Round [102] log likelihood: -275031.663927 EM: Round [103] log likelihood: -275031.663690 EM: Round [104] log likelihood: -275031.663459 EM: Round [105] log likelihood: -275031.663235 EM: Round [106] log likelihood: -275031.663016 EM: Round [107] log likelihood: -275031.662803 EM: Round [108] log likelihood: -275031.662595 EM: Round [109] log likelihood: -275031.662393 EM: Round [110] log likelihood: -275031.662196 EM: Round [111] log likelihood: -275031.662003 EM: Round [112] log likelihood: -275031.661816 EM: Round [113] log likelihood: -275031.661632 EM: Round [114] log likelihood: -275031.661454 EM: Round [115] log likelihood: -275031.661279 EM: Round [116] log likelihood: -275031.661109 EM: Round [117] log likelihood: -275031.660942 EM: Round [118] log likelihood: -275031.660780 EM: Round [119] log likelihood: -275031.660621 EM: Round [120] log likelihood: -275031.660466 EM: Round [121] log likelihood: -275031.660314 EM: Round [122] log likelihood: -275031.660166 EM: Round [123] log likelihood: -275031.660022 EM: Round [124] log likelihood: -275031.659880 EM: Round [125] log likelihood: -275031.659742 EM: Round [126] log likelihood: -275031.659607 EM: Round [127] log likelihood: -275031.659475 EM: Round [128] log likelihood: -275031.659346 EM: Round [129] log likelihood: -275031.659219 EM: Round [130] log likelihood: -275031.659096 EM: Round [131] log likelihood: -275031.658975 EM: Round [132] log likelihood: -275031.658857 EM: Round [133] log likelihood: -275031.658741 EM: Round [134] log likelihood: -275031.658628 EM: Round [135] log likelihood: -275031.658517 EM: Round [136] log likelihood: -275031.658409 EM: Round [137] log likelihood: -275031.658303 EM: Round [138] log likelihood: -275031.658199 EM: Round [139] log likelihood: -275031.658098 EM: Round [140] log likelihood: -275031.657998 EM: Stopping iterations at round 140 due to insufficient improvement in likelihood. EM: Starting log likelihood: -275164.151998 EM: Round [1] log likelihood: -274977.822332 EM: Round [2] log likelihood: -274910.461259 EM: Round [3] log likelihood: -274878.532011 EM: Round [4] log likelihood: -274861.502149 EM: Round [5] log likelihood: -274851.910837 EM: Round [6] log likelihood: -274846.312624 EM: Round [7] log likelihood: -274842.933393 EM: Round [8] log likelihood: -274840.820112 EM: Round [9] log likelihood: -274839.448951 EM: Round [10] log likelihood: -274838.526007 EM: Round [11] log likelihood: -274837.882538 EM: Round [12] log likelihood: -274837.419092 EM: Round [13] log likelihood: -274837.075373 EM: Round [14] log likelihood: -274836.813735 EM: Round [15] log likelihood: -274836.609984 EM: Round [16] log likelihood: -274836.448128 EM: Round [17] log likelihood: -274836.317312 EM: Round [18] log likelihood: -274836.209985 EM: Round [19] log likelihood: -274836.120775 EM: Round [20] log likelihood: -274836.045778 EM: Round [21] log likelihood: -274835.982107 EM: Round [22] log likelihood: -274835.927585 EM: Round [23] log likelihood: -274835.880547 EM: Round [24] log likelihood: -274835.839700 EM: Round [25] log likelihood: -274835.804025 EM: Round [26] log likelihood: -274835.772712 EM: Round [27] log likelihood: -274835.745105 EM: Round [28] log likelihood: -274835.720670 EM: Round [29] log likelihood: -274835.698968 EM: Round [30] log likelihood: -274835.679633 EM: Round [31] log likelihood: -274835.662359 EM: Round [32] log likelihood: -274835.646887 EM: Round [33] log likelihood: -274835.632996 EM: Round [34] log likelihood: -274835.620499 EM: Round [35] log likelihood: -274835.609234 EM: Round [36] log likelihood: -274835.599061 EM: Round [37] log likelihood: -274835.589857 EM: Round [38] log likelihood: -274835.581517 EM: Round [39] log likelihood: -274835.573947 EM: Round [40] log likelihood: -274835.567066 EM: Round [41] log likelihood: -274835.560803 EM: Round [42] log likelihood: -274835.555093 EM: Round [43] log likelihood: -274835.549880 EM: Round [44] log likelihood: -274835.545114 EM: Round [45] log likelihood: -274835.540752 EM: Round [46] log likelihood: -274835.536752 EM: Round [47] log likelihood: -274835.533081 EM: Round [48] log likelihood: -274835.529705 EM: Round [49] log likelihood: -274835.526598 EM: Round [50] log likelihood: -274835.523734 EM: Round [51] log likelihood: -274835.521091 EM: Round [52] log likelihood: -274835.518647 EM: Round [53] log likelihood: -274835.516384 EM: Round [54] log likelihood: -274835.514287 EM: Round [55] log likelihood: -274835.512339 EM: Round [56] log likelihood: -274835.510529 EM: Round [57] log likelihood: -274835.508843 EM: Round [58] log likelihood: -274835.507271 EM: Round [59] log likelihood: -274835.505804 EM: Round [60] log likelihood: -274835.504431 EM: Round [61] log likelihood: -274835.503145 EM: Round [62] log likelihood: -274835.501939 EM: Round [63] log likelihood: -274835.500806 EM: Round [64] log likelihood: -274835.499740 EM: Round [65] log likelihood: -274835.498736 EM: Round [66] log likelihood: -274835.497789 EM: Round [67] log likelihood: -274835.496893 EM: Round [68] log likelihood: -274835.496046 EM: Round [69] log likelihood: -274835.495244 EM: Round [70] log likelihood: -274835.494483 EM: Round [71] log likelihood: -274835.493759 EM: Round [72] log likelihood: -274835.493071 EM: Round [73] log likelihood: -274835.492416 EM: Round [74] log likelihood: -274835.491790 EM: Round [75] log likelihood: -274835.491193 EM: Round [76] log likelihood: -274835.490623 EM: Round [77] log likelihood: -274835.490076 EM: Round [78] log likelihood: -274835.489553 EM: Round [79] log likelihood: -274835.489051 EM: Round [80] log likelihood: -274835.488569 EM: Round [81] log likelihood: -274835.488106 EM: Round [82] log likelihood: -274835.487660 EM: Round [83] log likelihood: -274835.487231 EM: Round [84] log likelihood: -274835.486817 EM: Round [85] log likelihood: -274835.486418 EM: Round [86] log likelihood: -274835.486032 EM: Round [87] log likelihood: -274835.485660 EM: Round [88] log likelihood: -274835.485300 EM: Round [89] log likelihood: -274835.484952 EM: Round [90] log likelihood: -274835.484615 EM: Round [91] log likelihood: -274835.484288 EM: Round [92] log likelihood: -274835.483972 EM: Round [93] log likelihood: -274835.483665 EM: Round [94] log likelihood: -274835.483367 EM: Round [95] log likelihood: -274835.483077 EM: Round [96] log likelihood: -274835.482796 EM: Round [97] log likelihood: -274835.482523 EM: Round [98] log likelihood: -274835.482257 EM: Round [99] log likelihood: -274835.481999 EM: Round [100] log likelihood: -274835.481748 EM: Round [101] log likelihood: -274835.481503 EM: Round [102] log likelihood: -274835.481265 EM: Round [103] log likelihood: -274835.481033 EM: Round [104] log likelihood: -274835.480807 EM: Round [105] log likelihood: -274835.480587 EM: Round [106] log likelihood: -274835.480372 EM: Round [107] log likelihood: -274835.480162 EM: Round [108] log likelihood: -274835.479958 EM: Round [109] log likelihood: -274835.479759 EM: Round [110] log likelihood: -274835.479565 EM: Round [111] log likelihood: -274835.479375 EM: Round [112] log likelihood: -274835.479190 EM: Round [113] log likelihood: -274835.479009 EM: Round [114] log likelihood: -274835.478832 EM: Round [115] log likelihood: -274835.478660 EM: Round [116] log likelihood: -274835.478491 EM: Round [117] log likelihood: -274835.478327 EM: Round [118] log likelihood: -274835.478166 EM: Round [119] log likelihood: -274835.478009 EM: Round [120] log likelihood: -274835.477855 EM: Round [121] log likelihood: -274835.477705 EM: Round [122] log likelihood: -274835.477558 EM: Round [123] log likelihood: -274835.477415 EM: Round [124] log likelihood: -274835.477275 EM: Round [125] log likelihood: -274835.477137 EM: Round [126] log likelihood: -274835.477003 EM: Round [127] log likelihood: -274835.476872 EM: Round [128] log likelihood: -274835.476744 EM: Round [129] log likelihood: -274835.476618 EM: Round [130] log likelihood: -274835.476496 EM: Round [131] log likelihood: -274835.476376 EM: Round [132] log likelihood: -274835.476258 EM: Round [133] log likelihood: -274835.476143 EM: Round [134] log likelihood: -274835.476031 EM: Round [135] log likelihood: -274835.475921 EM: Round [136] log likelihood: -274835.475813 EM: Round [137] log likelihood: -274835.475708 EM: Round [138] log likelihood: -274835.475604 EM: Round [139] log likelihood: -274835.475504 EM: Round [140] log likelihood: -274835.475405 EM: Stopping iterations at round 140 due to insufficient improvement in likelihood. CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.uHnxWQdjOJ/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20 --fusion_preds /tmp/nxf.uHnxWQdjOJ/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.uHnxWQdjOJ/ctat_genome_lib_build_dir CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.uHnxWQdjOJ/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.uHnxWQdjOJ/ctat_genome_lib_build_dir CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.uHnxWQdjOJ/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter --genome_lib_dir /tmp/nxf.uHnxWQdjOJ/ctat_genome_lib_build_dir --max_promiscuity 10 --min_pct_dom_promiscuity 20 CMD: cp /tmp/nxf.uHnxWQdjOJ/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.uHnxWQdjOJ/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.uHnxWQdjOJ/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.uHnxWQdjOJ/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged CMD: ln -sf /tmp/nxf.uHnxWQdjOJ/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.uHnxWQdjOJ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered * Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.uHnxWQdjOJ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 208876971 > /tmp/nxf.uHnxWQdjOJ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM * Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.uHnxWQdjOJ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.uHnxWQdjOJ/ctat_genome_lib_build_dir > /tmp/nxf.uHnxWQdjOJ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo * Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.uHnxWQdjOJ/ctat_genome_lib_build_dir --annotate /tmp/nxf.uHnxWQdjOJ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.uHnxWQdjOJ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot * Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.uHnxWQdjOJ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.uHnxWQdjOJ/ctat_genome_lib_build_dir -done, see /tmp/nxf.uHnxWQdjOJ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass * Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.uHnxWQdjOJ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.uHnxWQdjOJ/ctat_genome_lib_build_dir -filter_likely_RT_artifacts: (pass: 1759, filtered: 10639) * Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.uHnxWQdjOJ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001 * Running CMD: cp /tmp/nxf.uHnxWQdjOJ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv * Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv * Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.uHnxWQdjOJ/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [ENSG00000258017.2] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [IGL.g@-ext] WARNING, no entry stored in dbm for [ENSG00000245958.6] WARNING, no entry stored in dbm for [IGL.g@-ext] WARNING, no entry stored in dbm for [ENSG00000234715.2] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [ENSG00000254485.5] WARNING, no entry stored in dbm for [ENSG00000243753.5] WARNING, no entry stored in dbm for [ENSG00000181126.13] WARNING, no entry stored in dbm for [ENSG00000225292.2] WARNING, no entry stored in dbm for [ENSG00000236438.7] WARNING, no entry stored in dbm for [ENSG00000230559.1] WARNING, no entry stored in dbm for [ENSG00000282458.1] WARNING, no entry stored in dbm for [ENSG00000227681.5] WARNING, no entry stored in dbm for [ENSG00000241318.3] WARNING, no entry stored in dbm for [ENSG00000256393.1] WARNING, no entry stored in dbm for [ENSG00000232527.8] WARNING, no entry stored in dbm for [ENSG00000272779.1] WARNING, no entry stored in dbm for [ENSG00000233930.4] WARNING, no entry stored in dbm for [ENSG00000286948.1] WARNING, no entry stored in dbm for [IGL.g@-ext] WARNING, no entry stored in dbm for [IGL.g@-ext] WARNING, no entry stored in dbm for [ENSG00000224609.8] WARNING, no entry stored in dbm for [ENSG00000257403.2] WARNING, no entry stored in dbm for [ENSG00000189149.12] WARNING, no entry stored in dbm for [ENSG00000267698.1] WARNING, no entry stored in dbm for [ENSG00000225594.1] WARNING, no entry stored in dbm for [ENSG00000236829.9] WARNING, no entry stored in dbm for [ENSG00000272848.2] WARNING, no entry stored in dbm for [ENSG00000242435.1] WARNING, no entry stored in dbm for [ENSG00000226049.3] WARNING, no entry stored in dbm for [ENSG00000260404.3] WARNING, no entry stored in dbm for [ENSG00000241350.1] WARNING, no entry stored in 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WARNING, no entry stored in dbm for [ENSG00000225292.2] WARNING, no entry stored in dbm for [ENSG00000270641.1] WARNING, no entry stored in dbm for [ENSG00000220804.8] WARNING, no entry stored in dbm for [ENSG00000248858.7] WARNING, no entry stored in dbm for [ENSG00000227183.3] WARNING, no entry stored in dbm for [ENSG00000259429.5] WARNING, no entry stored in dbm for [ENSG00000227906.8] WARNING, no entry stored in dbm for [ENSG00000261561.1] WARNING, no entry stored in dbm for [ENSG00000259429.5] WARNING, no entry stored in dbm for [ENSG00000229180.7] WARNING, no entry stored in dbm for [ENSG00000237685.1] WARNING, no entry stored in dbm for [ENSG00000227400.2] WARNING, no entry stored in dbm for [ENSG00000198054.12] WARNING, no entry stored in dbm for [ENSG00000205583.13] WARNING, no entry stored in dbm for [ENSG00000213498.3] WARNING, no entry stored in dbm for [ENSG00000256817.1] WARNING, no entry stored in dbm for [ENSG00000234782.3] WARNING, no entry stored in dbm for [ENSG00000227372.12] WARNING, no entry stored in dbm for [ENSG00000234770.1] WARNING, no entry stored in dbm for [ENSG00000245648.2] WARNING, no entry stored in dbm for [ENSG00000273306.1] WARNING, no entry stored in dbm for [ENSG00000214176.9] WARNING, no entry stored in dbm for [ENSG00000215158.9] WARNING, no entry stored in dbm for [ENSG00000256699.1] WARNING, no entry stored in dbm for [ENSG00000237729.2] WARNING, no entry stored in dbm for [ENSG00000234911.2] WARNING, no entry stored in dbm for [ENSG00000257621.8] WARNING, no entry stored in dbm for [ENSG00000226824.7] WARNING, no entry stored in dbm for [ENSG00000270576.1] WARNING, no entry stored in dbm for [ENSG00000248445.5] WARNING, no entry stored in dbm for [ENSG00000277072.5] WARNING, no entry stored in dbm for [ENSG00000265261.1] WARNING, no entry stored in dbm for [ENSG00000231646.6] WARNING, no entry stored in dbm for [ENSG00000227769.7] WARNING, no entry stored in dbm for [ENSG00000231926.1] WARNING, no entry stored in 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stored in dbm for [ENSG00000250299.6] WARNING, no entry stored in dbm for [ENSG00000247081.8] WARNING, no entry stored in dbm for [ENSG00000234771.3] WARNING, no entry stored in dbm for [ENSG00000234771.3] WARNING, no entry stored in dbm for [ENSG00000286788.1] WARNING, no entry stored in dbm for [ENSG00000245750.10] WARNING, no entry stored in dbm for [ENSG00000228818.1] WARNING, no entry stored in dbm for [ENSG00000228463.10] WARNING, no entry stored in dbm for [ENSG00000228463.10] WARNING, no entry stored in dbm for [ENSG00000287411.1] WARNING, no entry stored in dbm for [ENSG00000185986.12] WARNING, no entry stored in dbm for [ENSG00000188002.10] WARNING, no entry stored in dbm for [ENSG00000214826.5] WARNING, no entry stored in dbm for [ENSG00000227681.5] WARNING, no entry stored in dbm for [ENSG00000235903.9] WARNING, no entry stored in dbm for [ENSG00000225482.1] WARNING, no entry stored in dbm for [ENSG00000256218.1] WARNING, no entry stored in dbm for [ENSG00000231307.1] WARNING, no entry stored in dbm for [ENSG00000218351.2] WARNING, no entry stored in dbm for [ENSG00000230116.1] WARNING, no entry stored in dbm for [ENSG00000213238.6] WARNING, no entry stored in dbm for [ENSG00000216639.1] WARNING, no entry stored in dbm for [ENSG00000269296.1] WARNING, no entry stored in dbm for [ENSG00000236801.1] WARNING, no entry stored in dbm for [ENSG00000244237.1] WARNING, no entry stored in dbm for [ENSG00000239315.4] WARNING, no entry stored in dbm for [ENSG00000218227.3] WARNING, no entry stored in dbm for [ENSG00000241923.2] WARNING, no entry stored in dbm for [ENSG00000224987.1] WARNING, no entry stored in dbm for [ENSG00000212172.1] WARNING, no entry stored in dbm for [ENSG00000222976.1] WARNING, no entry stored in dbm for [ENSG00000201684.1] WARNING, no entry stored in dbm for [ENSG00000202351.1] WARNING, no entry stored in dbm for [ENSG00000201875.1] WARNING, no entry stored in dbm for [ENSG00000237899.1] WARNING, no entry stored in dbm for [ENSG00000282933.2] WARNING, no entry stored in dbm for [ENSG00000258279.4] WARNING, no entry stored in dbm for [ENSG00000249418.2] WARNING, no entry stored in dbm for [ENSG00000250938.6] WARNING, no entry stored in dbm for [ENSG00000213174.3] WARNING, no entry stored in dbm for [ENSG00000258012.1] WARNING, no entry stored in dbm for [ENSG00000262962.1] WARNING, no entry stored in dbm for [ENSG00000274979.1] WARNING, no entry stored in dbm for [ENSG00000258033.1] WARNING, no entry stored in dbm for [ENSG00000249859.12] WARNING, no entry stored in dbm for [ENSG00000228797.2] WARNING, no entry stored in dbm for [ENSG00000196796.5] WARNING, no entry stored in dbm for [ENSG00000226629.1] WARNING, no entry stored in dbm for [ENSG00000212664.5] WARNING, no entry stored in dbm for [ENSG00000277654.6] WARNING, no entry stored in dbm for [ENSG00000099725.14] WARNING, no entry stored in dbm for [ENSG00000250303.4] WARNING, no entry stored in dbm for [ENSG00000227851.1] WARNING, no entry stored in dbm for [ENSG00000221817.10] WARNING, no entry stored in dbm for [ENSG00000225138.8] WARNING, no entry stored in dbm for [ENSG00000226401.3] WARNING, no entry stored in dbm for [ENSG00000225746.13] WARNING, no entry stored in dbm for [ENSG00000258699.1] WARNING, no entry stored in dbm for [ENSG00000266371.1] WARNING, no entry stored in dbm for [ENSG00000287286.1] WARNING, no entry stored in dbm for [ENSG00000237949.2] WARNING, no entry stored in dbm for [ENSG00000183506.17] WARNING, no entry stored in dbm for [ENSG00000199568.1] WARNING, no entry stored in dbm for [ENSG00000287040.1] WARNING, no entry stored in dbm for [ENSG00000287383.1] WARNING, no entry stored in dbm for [ENSG00000240405.7] WARNING, no entry stored in dbm for [ENSG00000249699.1] WARNING, no entry stored in dbm for [ENSG00000286330.1] WARNING, no entry stored in dbm for [ENSG00000253438.4] WARNING, no entry stored in dbm for [ENSG00000281880.2] WARNING, no entry stored in dbm for [ENSG00000256862.3] WARNING, no entry stored in dbm for [ENSG00000288530.1] WARNING, no entry stored in dbm for [ENSG00000247556.6] WARNING, no entry stored in dbm for [ENSG00000229209.1] WARNING, no entry stored in dbm for [ENSG00000249419.1] WARNING, no entry stored in dbm for [ENSG00000210049.1] WARNING, no entry stored in dbm for [ENSG00000262879.6] WARNING, no entry stored in dbm for [ENSG00000225159.1] WARNING, no entry stored in dbm for [ENSG00000237445.2] WARNING, no entry stored in dbm for [ENSG00000280222.1] WARNING, no entry stored in dbm for [ENSG00000224081.9] WARNING, no entry stored in dbm for [ENSG00000215790.8] WARNING, no entry stored in dbm for [ENSG00000272145.1] WARNING, no entry stored in dbm for [ENSG00000275642.1] WARNING, no entry stored in dbm for [ENSG00000236051.7] WARNING, no entry stored in dbm for [ENSG00000213740.2] WARNING, no entry stored in dbm for [ENSG00000286960.1] WARNING, no entry stored in dbm for [ENSG00000233225.3] WARNING, no entry stored in dbm for [ENSG00000233057.1] WARNING, no entry stored in dbm for [ENSG00000197182.14] WARNING, no entry stored in dbm for [ENSG00000236172.7] WARNING, no entry stored in dbm for [ENSG00000203709.12] WARNING, no entry stored in dbm for [ENSG00000267519.6] WARNING, no entry stored in dbm for [ENSG00000261641.2] WARNING, no entry stored in dbm for [ENSG00000186594.14] WARNING, no entry stored in dbm for [ENSG00000283240.1] WARNING, no entry stored in dbm for [ENSG00000230649.3] WARNING, no entry stored in dbm for [ENSG00000287303.1] WARNING, no entry stored in dbm for [ENSG00000261286.1] WARNING, no entry stored in dbm for [ENSG00000262185.3] WARNING, no entry stored in dbm for [ENSG00000259663.2] WARNING, no entry stored in dbm for [ENSG00000239699.1] WARNING, no entry stored in dbm for [ENSG00000248367.1] WARNING, no entry stored in dbm for [ENSG00000228536.3] WARNING, no entry stored in dbm for [ENSG00000228285.2] WARNING, no entry stored in dbm for [ENSG00000261241.7] WARNING, no entry stored in dbm for [ENSG00000176605.9] WARNING, no entry stored in dbm for [ENSG00000235974.1] WARNING, no entry stored in dbm for [ENSG00000247675.7] WARNING, no entry stored in dbm for [ENSG00000175779.4] WARNING, no entry stored in dbm for [ENSG00000215244.3] WARNING, no entry stored in dbm for [ENSG00000231566.2] WARNING, no entry stored in dbm for [ENSG00000248238.2] WARNING, no entry stored in dbm for [ENSG00000250754.6] WARNING, no entry stored in dbm for [ENSG00000253490.5] WARNING, no entry stored in dbm for [ENSG00000233973.7] WARNING, no entry stored in dbm for [ENSG00000245937.8] WARNING, no entry stored in dbm for [ENSG00000204588.5] WARNING, no entry stored in dbm for [ENSG00000225269.3] WARNING, no entry stored in dbm for [ENSG00000266904.6] WARNING, no entry stored in dbm for [ENSG00000233237.8] WARNING, no entry stored in dbm for [ENSG00000232117.2] WARNING, no entry stored in dbm for [ENSG00000232803.1] WARNING, no entry stored in dbm for [ENSG00000232117.2] WARNING, no entry stored in dbm for [ENSG00000232803.1] WARNING, no entry stored in dbm for [ENSG00000189343.7] WARNING, no entry stored in dbm for [ENSG00000231203.1] WARNING, no entry stored in dbm for [ENSG00000249668.1] WARNING, no entry stored in dbm for [ENSG00000218728.3] WARNING, no entry stored in dbm for [ENSG00000263647.1] WARNING, no entry stored in dbm for [ENSG00000286013.1] WARNING, no entry stored in dbm for [ENSG00000225470.8] WARNING, no entry stored in dbm for [ENSG00000287872.1] WARNING, no entry stored in dbm for [ENSG00000259631.1] WARNING, no entry stored in dbm for [ENSG00000260776.6] WARNING, no entry stored in dbm for [ENSG00000231304.2] WARNING, no entry stored in dbm for [ENSG00000254034.2] WARNING, no entry stored in dbm for [ENSG00000241449.6] WARNING, no entry stored in dbm for [ENSG00000197558.13] WARNING, no entry stored in dbm for [ENSG00000224128.1] WARNING, no entry stored in dbm for [ENSG00000235821.1] WARNING, no entry stored in dbm for [ENSG00000258676.5] WARNING, no entry stored in dbm for [ENSG00000237306.1] WARNING, no entry stored in dbm for [ENSG00000220305.1] WARNING, no entry stored in dbm for [ENSG00000179362.14] WARNING, no entry stored in dbm for [ENSG00000231471.1] WARNING, no entry stored in dbm for [ENSG00000232916.1] WARNING, no entry stored in dbm for [ENSG00000232916.1] WARNING, no entry stored in dbm for [ENSG00000231471.1] WARNING, no entry stored in dbm for [ENSG00000259722.2] WARNING, no entry stored in dbm for [ENSG00000230519.2] WARNING, no entry stored in dbm for [ENSG00000124097.7] WARNING, no entry stored in dbm for [ENSG00000230043.1] WARNING, no entry stored in dbm for [ENSG00000274471.2] WARNING, no entry stored in dbm for [ENSG00000276550.4] WARNING, no entry stored in dbm for [ENSG00000235464.1] WARNING, no entry stored in dbm for [ENSG00000222020.3] WARNING, no entry stored in dbm for [ENSG00000227262.3] WARNING, no entry stored in dbm for [ENSG00000206159.11] WARNING, no entry stored in dbm for [ENSG00000227695.6] WARNING, no entry stored in dbm for [ENSG00000224829.3] WARNING, no entry stored in dbm for [ENSG00000215302.8] WARNING, no entry stored in dbm for [ENSG00000166104.15] WARNING, no entry stored in dbm for [ENSG00000166104.15] WARNING, no entry stored in dbm for [ENSG00000250903.9] WARNING, no entry stored in dbm for [ENSG00000254349.6] WARNING, no entry stored in dbm for [ENSG00000215899.3] WARNING, no entry stored in dbm for [ENSG00000258960.1] WARNING, no entry stored in dbm for [ENSG00000213362.3] WARNING, no entry stored in dbm for [ENSG00000218689.2] WARNING, no entry stored in dbm for [ENSG00000283095.1] WARNING, no entry stored in dbm for [ENSG00000203801.8] WARNING, no entry stored in dbm for [ENSG00000215483.11] WARNING, no entry stored in dbm for [ENSG00000215483.11] WARNING, no entry stored in dbm for [ENSG00000275340.1] WARNING, no entry stored in dbm for [ENSG00000214093.3] WARNING, no entry stored in dbm for [ENSG00000251669.6] WARNING, no entry stored in dbm for [ENSG00000225684.4] WARNING, no entry stored in dbm for [ENSG00000235618.8] WARNING, no entry stored in dbm for [ENSG00000261889.1] WARNING, no entry stored in dbm for [ENSG00000233922.3] WARNING, no entry stored in dbm for [ENSG00000230910.4] WARNING, no entry stored in dbm for [ENSG00000229116.3] WARNING, no entry stored in dbm for [ENSG00000226833.6] WARNING, no entry stored in dbm for [ENSG00000234678.2] WARNING, no entry stored in dbm for [ENSG00000268751.1] WARNING, no entry stored in dbm for [ENSG00000220505.2] WARNING, no entry stored in dbm for [ENSG00000186704.9] WARNING, no entry stored in dbm for [ENSG00000178636.8] WARNING, no entry stored in dbm for [ENSG00000229358.3] WARNING, no entry stored in dbm for [ENSG00000237325.3] WARNING, no entry stored in dbm for [ENSG00000224004.2] WARNING, no entry stored in dbm for [ENSG00000241352.3] WARNING, no entry stored in dbm for [ENSG00000232732.11] WARNING, no entry stored in dbm for [ENSG00000251151.2] WARNING, no entry stored in dbm for [ENSG00000271162.1] WARNING, no entry stored in dbm for [ENSG00000257913.2] WARNING, no entry stored in dbm for [ENSG00000230580.1] WARNING, no entry stored in dbm for [ENSG00000183444.10] WARNING, no entry stored in dbm for [ENSG00000286458.1] WARNING, no entry stored in dbm for [ENSG00000179342.4] WARNING, no entry stored in dbm for [ENSG00000215908.10] WARNING, no entry stored in dbm for [ENSG00000283041.1] WARNING, no entry stored in dbm for [ENSG00000283453.2] WARNING, no entry stored in dbm for [ENSG00000234497.5] WARNING, no entry stored in dbm for [ENSG00000215374.6] WARNING, no entry stored in dbm for [ENSG00000234838.3] WARNING, no entry stored in dbm for [ENSG00000224404.2] WARNING, no entry stored in dbm for [ENSG00000196796.5] WARNING, no entry stored in dbm for [ENSG00000173209.23] WARNING, no entry stored in dbm for [ENSG00000205771.6] WARNING, no entry stored in dbm for [ENSG00000225493.1] WARNING, no entry stored in dbm for [ENSG00000185186.10] WARNING, no entry stored in dbm for [ENSG00000248508.8] WARNING, no entry stored in dbm for [ENSG00000249937.8] WARNING, no entry stored in dbm for [ENSG00000167747.15] WARNING, no entry stored in dbm for [ENSG00000258144.2] WARNING, no entry stored in dbm for [ENSG00000186825.6] WARNING, no entry stored in dbm for [ENSG00000205534.6] WARNING, no entry stored in dbm for [ENSG00000258130.8] WARNING, no entry stored in dbm for [ENSG00000264920.2] WARNING, no entry stored in dbm for [ENSG00000234076.1] WARNING, no entry stored in dbm for [ENSG00000279022.1] WARNING, no entry stored in dbm for [ENSG00000245970.2] WARNING, no entry stored in dbm for [ENSG00000253833.1] WARNING, no entry stored in dbm for [ENSG00000234709.2] WARNING, no entry stored in dbm for [ENSG00000203643.3] WARNING, no entry stored in dbm for [ENSG00000228463.10] WARNING, no entry stored in dbm for [ENSG00000255345.1] WARNING, no entry stored in dbm for [ENSG00000255135.4] WARNING, no entry stored in dbm for [ENSG00000254477.2] WARNING, no entry stored in dbm for [ENSG00000248546.3] WARNING, no entry stored in dbm for [ENSG00000249406.3] WARNING, no entry stored in dbm for [ENSG00000231864.2] WARNING, no entry stored in dbm for [ENSG00000287557.1] WARNING, no entry stored in dbm for [ENSG00000169253.3] WARNING, no entry stored in dbm for [ENSG00000270780.1] WARNING, no entry stored in dbm for [ENSG00000234589.4] WARNING, no entry stored in dbm for [ENSG00000286469.1] WARNING, no entry stored in dbm for [ENSG00000225096.3] WARNING, no entry stored in dbm for [ENSG00000232499.2] WARNING, no entry stored in dbm for [ENSG00000287398.1] WARNING, no entry stored in dbm for [ENSG00000246203.2] WARNING, no entry stored in dbm for [ENSG00000285424.1] WARNING, no entry stored in dbm for [ENSG00000282997.1] WARNING, no entry stored in dbm for [ENSG00000258656.1] WARNING, no entry stored in dbm for [ENSG00000214195.4] WARNING, no entry stored in dbm for [ENSG00000286306.1] WARNING, no entry stored in dbm for [ENSG00000287261.1] WARNING, no entry stored in dbm for [ENSG00000276805.2] WARNING, no entry stored in dbm for [ENSG00000273162.1] WARNING, no entry stored in dbm for [ENSG00000288543.1] WARNING, no entry stored in dbm for [ENSG00000236740.6] WARNING, no entry stored in dbm for [ENSG00000260425.1] WARNING, no entry stored in dbm for [ENSG00000228719.1] WARNING, no entry stored in dbm for [ENSG00000286652.1] WARNING, no entry stored in dbm for [ENSG00000247828.8] WARNING, no entry stored in dbm for [ENSG00000248692.5] WARNING, no entry stored in dbm for [ENSG00000280143.1] WARNING, no entry stored in dbm for [ENSG00000253853.3] WARNING, no entry stored in dbm for [ENSG00000276850.5] WARNING, no entry stored in dbm for [ENSG00000277089.4] WARNING, no entry stored in dbm for [ENSG00000249942.1] WARNING, no entry stored in dbm for [ENSG00000277125.1] WARNING, no entry stored in dbm for [ENSG00000215158.9] WARNING, no entry stored in dbm for [ENSG00000229930.1] WARNING, no entry stored in dbm for [ENSG00000229930.1] WARNING, no entry stored in dbm for [ENSG00000250999.2] WARNING, no entry stored in dbm for [ENSG00000262488.1] WARNING, no entry stored in dbm for [ENSG00000243199.1] WARNING, no entry stored in dbm for [ENSG00000242390.1] WARNING, no entry stored in dbm for [ENSG00000214942.6] WARNING, no entry stored in dbm for [ENSG00000277332.1] WARNING, no entry stored in dbm for [ENSG00000250159.7] WARNING, no entry stored in dbm for [ENSG00000279439.1] WARNING, no entry stored in dbm for [ENSG00000251314.2] WARNING, no entry stored in dbm for [ENSG00000259692.6] WARNING, no entry stored in dbm for [ENSG00000231646.6] WARNING, no entry stored in dbm for [ENSG00000268362.6] WARNING, no entry stored in dbm for [ENSG00000259418.1] WARNING, no entry stored in dbm for [ENSG00000264151.6] WARNING, no entry stored in dbm for [ENSG00000262580.5] WARNING, no entry stored in dbm for [ENSG00000283415.2] WARNING, no entry stored in dbm for [ENSG00000204745.4] WARNING, no entry stored in dbm for [ENSG00000266931.2] WARNING, no entry stored in dbm for [ENSG00000283674.3] WARNING, no entry stored in dbm for [ENSG00000267002.4] WARNING, no entry stored in dbm for [ENSG00000185641.6] WARNING, no entry stored in dbm for [ENSG00000287408.1] WARNING, no entry stored in dbm for [ENSG00000260005.6] WARNING, no entry stored in dbm for [ENSG00000213527.5] WARNING, no entry stored in dbm for [ENSG00000257817.2] WARNING, no entry stored in dbm for [ENSG00000287677.2] WARNING, no entry stored in dbm for [ENSG00000259354.5] WARNING, no entry stored in dbm for [ENSG00000272382.1] WARNING, no entry stored in dbm for [ENSG00000259172.1] WARNING, no entry stored in dbm for [ENSG00000242199.1] WARNING, no entry stored in dbm for [ENSG00000179066.8] WARNING, no entry stored in dbm for [ENSG00000242858.1] WARNING, no entry stored in dbm for [ENSG00000287858.1] WARNING, no entry stored in dbm for [ENSG00000231646.6] WARNING, no entry stored in dbm for [ENSG00000229852.4] WARNING, no entry stored in dbm for [ENSG00000234584.1] WARNING, no entry stored in dbm for [ENSG00000275393.1] WARNING, no entry stored in dbm for [ENSG00000243302.3] WARNING, no entry stored in dbm for [ENSG00000253415.1] WARNING, no entry stored in dbm for [ENSG00000269032.1] WARNING, no entry stored in dbm for [ENSG00000236679.2] WARNING, no entry stored in dbm for [ENSG00000286449.1] WARNING, no entry stored in dbm for [ENSG00000177699.4] WARNING, no entry stored in dbm for [ENSG00000249839.1] WARNING, no entry stored in dbm for [ENSG00000240376.1] WARNING, no entry stored in dbm for [ENSG00000270804.1] WARNING, no entry stored in dbm for [ENSG00000268884.1] WARNING, no entry stored in dbm for [ENSG00000253133.2] WARNING, no entry stored in dbm for [ENSG00000215606.4] WARNING, no entry stored in dbm for [ENSG00000234352.9] WARNING, no entry stored in dbm for [ENSG00000267984.1] WARNING, no entry stored in dbm for [ENSG00000276548.1] WARNING, no entry stored in dbm for [ENSG00000189149.12] WARNING, no entry stored in dbm for [ENSG00000248544.2] WARNING, no entry stored in dbm for [ENSG00000286739.1] WARNING, no entry stored in dbm for [ENSG00000285904.1] WARNING, no entry stored in dbm for [ENSG00000279583.1] WARNING, no entry stored in dbm for [ENSG00000226824.7] WARNING, no entry stored in dbm for [ENSG00000270576.1] WARNING, no entry stored in dbm for [ENSG00000267623.3] WARNING, no entry stored in dbm for [ENSG00000274712.2] WARNING, no entry stored in dbm for [ENSG00000223561.7] WARNING, no entry stored in dbm for [ENSG00000205485.13] WARNING, no entry stored in dbm for [ENSG00000205485.13] WARNING, no entry stored in dbm for [ENSG00000241057.2] WARNING, no entry stored in dbm for [ENSG00000239556.4] WARNING, no entry stored in dbm for [ENSG00000274177.1] WARNING, no entry stored in dbm for [ENSG00000196656.7] WARNING, no entry stored in dbm for [ENSG00000228113.7] WARNING, no entry stored in dbm for [ENSG00000272168.8] * STAR-Fusion complete. See output: /tmp/nxf.uHnxWQdjOJ/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)