Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e6/22f03ae3a13b24a777eef22c12e6ee/659_cRB-T1-TRNA-1_B23WHTKLT4_1.starfusion.starfusion.fusion_predictions.filtered_pass_only.tsv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/stage-99ebc9bd-f9f1-4b2c-b9a0-02ddaf99f257/75/8438968e551d03cb7cc7a0681df9ae/dummy_file_fusioncatcher.txt
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0c/af9210457e1d43f686768161dd97ee/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0c/af9210457e1d43f686768161dd97ee/.command.run
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/fusion_report_db
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/65/9b828cfafb33d0fc10897059c7b8bb/659_cRB-T1-TRNA-1_B23WHTKLT4_1.arriba.fusions.filtered_pass_only.tsv
==> STAGING COMPLETE (6 inputs)

Running application...
PTPRK--RSPO3
starfusion
arriba
AC025884.2--IGH-@-ext
starfusion
TLK2--AC240565.1
starfusion

  0%|          | 0/3 [00:00<?, ?it/s]
Processing PTPRK--RSPO3:   0%|          | 0/3 [00:00<?, ?it/s]
Processing PTPRK--RSPO3:  33%|███▎      | 1/3 [00:00<00:00,  9.25it/s]
Processing AC025884.2--IGH-@-ext:  33%|███▎      | 1/3 [00:00<00:00,  9.25it/s]
Processing AC025884.2--IGH-@-ext:  67%|██████▋   | 2/3 [00:00<00:00,  9.48it/s]
Processing TLK2--AC240565.1:  67%|██████▋   | 2/3 [00:00<00:00,  9.48it/s]     
Processing TLK2--AC240565.1: 100%|██████████| 3/3 [00:00<00:00,  9.55it/s]
Processing TLK2--AC240565.1: 100%|██████████| 3/3 [00:00<00:00,  9.50it/s]
cat: fusion_report_db/DB-timestamp.txt: No such file or directory