Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1f/9718430fe20a6a2af4bd92330716eb/659_cIX-T1-TRNA-1_B23WHTKLT4_1.Aligned.sortedByCoord.out.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e6/fa62fd5da9fbd8906243bfddedf53b/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e6/fa62fd5da9fbd8906243bfddedf53b/.command.run
==> STAGING COMPLETE (3 inputs)

PAIRED_END_BAM_INPUT
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Processed 591000000 records
paired = 293556733
unpaired = 4171288
MERGED PAIRED END READS = 293556733
MATES PROCESSED = 591284754
TOTAL READS     = 297728021
DISTINCT READS  = 6.2564e+07
DISTINCT COUNTS = 969
MAX COUNT       = 735730
COUNTS OF 1     = 1.41909e+07
MAX TERMS       = 100
OBSERVED COUNTS (735731)
1	14190924
2	9772570
3	8261666
4	6848544
5	5484940
6	4267418
7	3249732
8	2443324
9	1819124
10	1354968
11	1012084
12	759482
13	575708
14	442300
15	340451
16	269537
17	214064
18	172007
19	139806
20	115278
21	94723
22	79510
23	67490
24	57334
25	48690
26	42191
27	36343
28	32212
29	28258
30	25084
31	22228
32	19924
33	17922
34	16094
35	14614
36	13349
37	12120
38	11020
39	10273
40	9410
41	8620
42	7914
43	7270
44	6911
45	6489
46	5864
47	5616
48	5362
49	4793
50	4653
51	4251
52	4033
53	3888
54	3515
55	3431
56	3276
57	3028
58	2932
59	2793
60	2580
61	2484
62	2333
63	2212
64	2084
65	2041
66	1868
67	1849
68	1779
69	1753
70	1611
71	1550
72	1396
73	1423
74	1361
75	1327
76	1281
77	1173
78	1144
79	1159
80	1062
81	1007
82	995
83	979
84	931
85	931
86	864
87	804
88	773
89	782
90	722
91	687
92	701
93	665
94	671
95	636
96	592
97	622
98	613
99	539
100	559
101	523
102	510
103	521
104	467
105	526
106	456
107	408
108	461
109	425
110	400
111	413
112	369
113	384
114	347
115	370
116	353
117	301
118	318
119	345
120	305
121	285
122	299
123	288
124	285
125	256
126	271
127	271
128	254
129	240
130	233
131	227
132	266
133	215
134	215
135	220
136	204
137	195
138	183
139	189
140	205
141	209
142	189
143	177
144	181
145	174
146	190
147	157
148	173
149	172
150	170
151	130
152	162
153	154
154	154
155	143
156	151
157	125
158	136
159	146
160	152
161	127
162	109
163	131
164	137
165	124
166	105
167	129
168	97
169	108
170	103
171	117
172	82
173	116
174	115
175	98
176	95
177	88
178	110
179	104
180	91
181	104
182	95
183	94
184	77
185	81
186	82
187	76
188	67
189	98
190	81
191	75
192	74
193	73
194	70
195	82
196	65
197	71
198	62
199	69
200	83
201	58
202	64
203	51
204	64
205	52
206	55
207	56
208	52
209	56
210	46
211	45
212	53
213	43
214	56
215	53
216	41
217	50
218	53
219	43
220	47
221	53
222	43
223	45
224	46
225	47
226	47
227	45
228	47
229	28
230	43
231	34
232	40
233	50
234	27
235	35
236	45
237	41
238	38
239	41
240	33
241	31
242	36
243	37
244	40
245	36
246	35
247	41
248	30
249	36
250	32
251	40
252	23
253	30
254	36
255	23
256	34
257	29
258	43
259	24
260	35
261	25
262	28
263	27
264	31
265	30
266	25
267	34
268	31
269	28
270	26
271	29
272	20
273	23
274	23
275	23
276	27
277	26
278	32
279	34
280	18
281	27
282	20
283	12
284	25
285	25
286	19
287	19
288	19
289	24
290	25
291	20
292	9
293	15
294	19
295	23
296	18
297	7
298	19
299	11
300	17
301	16
302	29
303	13
304	18
305	21
306	19
307	22
308	24
309	15
310	14
311	19
312	20
313	14
314	18
315	17
316	17
317	9
318	13
319	14
320	17
321	19
322	18
323	16
324	19
325	15
326	12
327	17
328	13
329	12
330	13
331	25
332	12
333	17
334	10
335	16
336	19
337	13
338	12
339	13
340	9
341	16
342	6
343	22
344	10
345	16
346	8
347	16
348	16
349	15
350	6
351	9
352	17
353	13
354	8
355	12
356	15
357	12
358	12
359	9
360	5
361	6
362	14
363	11
364	7
365	10
366	7
367	11
368	16
369	16
370	7
371	12
372	9
373	10
374	8
375	10
376	9
377	6
378	7
379	10
380	13
381	6
382	2
383	5
384	12
385	12
386	8
387	14
388	8
389	13
390	4
391	3
392	4
393	9
394	9
395	7
396	12
397	5
398	6
399	9
400	9
401	6
402	10
403	5
404	10
405	8
406	7
407	6
408	9
409	10
410	8
411	7
412	4
413	9
414	6
415	8
416	10
417	10
418	8
419	7
420	8
421	10
422	5
423	4
424	5
425	4
426	6
427	10
428	6
429	4
430	2
431	7
432	6
433	5
434	2
435	2
436	2
437	4
438	7
439	5
440	3
441	6
442	2
443	8
444	7
445	3
446	3
447	5
448	5
449	1
450	4
451	7
452	8
453	5
454	9
455	4
456	2
457	4
458	6
459	7
460	3
461	5
462	4
463	8
464	5
465	2
466	10
467	8
468	4
469	5
470	3
471	3
472	6
473	3
474	3
475	2
476	4
477	6
478	3
479	3
480	6
481	3
482	2
483	5
484	7
485	2
486	3
487	4
488	5
489	3
490	8
491	6
492	5
493	4
494	4
495	4
496	2
497	8
498	2
499	9
500	7
501	1
502	4
503	6
504	3
505	5
506	2
507	3
508	1
509	4
510	2
511	3
512	3
513	4
514	3
515	3
516	2
517	2
518	6
519	5
520	4
521	2
522	4
523	3
524	1
525	3
526	4
527	2
528	6
529	2
530	5
531	2
532	4
533	5
534	7
535	3
536	1
537	3
538	2
539	3
540	6
541	1
542	2
543	1
544	6
545	4
546	5
547	3
548	2
549	1
551	1
552	3
553	6
554	6
555	2
556	1
557	3
558	3
559	1
560	3
561	3
562	3
563	3
564	1
565	3
566	3
567	3
569	1
570	5
572	4
574	1
575	3
576	4
577	4
579	3
580	5
583	5
584	1
586	1
587	2
588	4
589	3
590	4
591	1
592	2
593	1
594	3
596	1
599	3
600	1
601	2
603	3
604	1
605	2
606	3
607	2
608	1
609	3
610	2
611	1
612	3
613	1
614	3
615	1
616	2
617	4
618	3
619	2
620	1
621	6
622	1
623	1
624	5
625	2
626	1
627	4
628	1
629	1
630	1
631	4
632	1
635	3
637	1
638	2
640	3
641	5
642	2
643	4
644	1
645	2
647	1
648	1
649	5
650	3
651	1
652	1
653	1
655	4
656	1
658	1
660	2
662	1
663	2
665	1
666	4
667	2
668	4
669	2
673	1
674	2
675	4
676	3
677	2
678	5
680	1
681	1
682	3
683	1
686	2
687	1
688	1
690	3
692	4
694	1
695	3
696	3
697	1
698	1
699	1
700	2
701	1
702	1
703	1
704	1
705	2
706	1
707	3
708	2
710	2
712	2
713	2
715	2
716	1
717	1
718	3
719	1
721	1
724	2
725	1
727	1
728	2
729	2
730	1
732	2
734	1
735	2
738	1
739	2
740	3
741	1
744	1
745	1
746	1
748	2
750	1
756	2
757	1
758	2
761	1
762	1
764	2
767	3
770	1
771	2
772	2
773	1
775	1
778	1
779	3
780	2
782	1
784	1
785	1
788	1
789	1
792	1
793	2
797	1
799	1
801	2
803	1
805	1
806	1
811	2
813	2
817	2
820	1
823	1
824	1
827	1
828	2
829	2
831	1
832	1
833	3
834	2
837	1
839	1
840	1
841	2
843	1
846	1
847	1
848	1
849	1
850	1
852	1
853	2
854	2
855	1
856	1
857	1
858	1
859	1
860	1
863	1
864	4
867	1
868	2
869	1
873	2
876	1
878	1
879	1
882	1
888	2
889	2
893	1
894	1
897	1
898	1
899	1
902	3
905	1
906	1
908	1
909	1
910	1
917	1
919	1
921	2
922	1
923	1
925	1
927	1
930	1
931	1
933	2
936	2
937	1
938	2
940	1
941	4
942	2
946	1
950	1
954	1
955	2
957	1
961	1
963	1
965	1
969	1
973	1
974	1
975	1
978	1
979	2
985	1
987	1
990	1
993	1
994	1
996	1
997	1
998	1
999	2
1006	1
1010	1
1012	1
1022	2
1027	1
1028	1
1051	1
1053	2
1056	1
1058	1
1060	1
1067	1
1070	1
1072	1
1073	1
1074	2
1075	1
1077	1
1080	1
1081	1
1086	1
1094	1
1099	1
1100	1
1108	2
1110	1
1113	1
1114	1
1116	1
1125	1
1133	1
1139	1
1142	2
1156	1
1159	1
1161	1
1164	1
1171	1
1174	1
1175	1
1176	1
1177	1
1184	1
1197	1
1201	1
1205	1
1207	1
1210	1
1218	1
1227	1
1229	1
1254	1
1258	1
1261	1
1264	1
1266	1
1280	1
1283	1
1284	1
1286	1
1287	1
1322	1
1330	1
1336	1
1338	1
1339	1
1340	1
1344	1
1350	1
1356	1
1358	1
1373	1
1380	1
1384	1
1400	1
1421	1
1427	1
1459	1
1463	1
1474	1
1477	1
1481	1
1487	1
1492	1
1506	1
1521	1
1523	1
1535	1
1537	1
1542	1
1549	1
1561	1
1584	1
1589	1
1593	1
1599	2
1666	1
1682	1
1685	1
1703	1
1720	1
1747	1
1760	1
1780	1
1782	1
1803	1
1813	1
1818	1
1819	1
1827	1
1872	1
1914	1
1919	1
1981	1
2055	1
2066	1
2101	1
2170	1
2171	1
2527	1
2537	1
2657	1
2721	1
2735	1
2772	1
2796	1
2885	1
2953	1
3048	1
3067	1
3140	1
3222	1
3349	1
3358	1
3656	1
4835	1
4992	1
5806	1
10171	1
11030	1
11382	1
40854	1
735730	1

[ESTIMATING YIELD CURVE]
[BOOTSTRAPPING HISTOGRAM]
..._........_...._.........................._.._._........_.............
....................._............_._.
[COMPUTING CONFIDENCE INTERVALS]
[WRITING OUTPUT]