[W::hts_idx_load3] The index file is older than the data file: 659_6i-T1-TRNA-1_B23WHTKLT4_1.Aligned.sortedByCoord.out.bam.bai
Reading reference bed file:  ref_annot.bed  ...  Done
Load BAM file ...  Done

===================================================================
Total splicing  Events:	187001654
Known Splicing Events:	184881542
Partial Novel Splicing Events:	1033037
Novel Splicing Events:	983438
Filtered Splicing Events:	103637

Total splicing  Junctions:	276886
Known Splicing Junctions:	201485
Partial Novel Splicing Junctions:	40197
Novel Splicing Junctions:	35204

===================================================================
Create BED file ...
Create Interact file ...