File Info

Filename
FFPE_HD789_01_RNA_13_B23WHTKLT4_1.FusionInspector.fusions.abridged.tsv
Full Path
s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0020/B23WHTKLT4/nfcore_rnafusion_100M__04da504a--20260527-151807/fusioninspector/FFPE_HD789_01_RNA_13_B23WHTKLT4_1.FusionInspector.fusions.abridged.tsv
Size
10.9 KB
Workflow Run
dev_rna_exp0020_100M-04da504a
Published
May 27, 2026 6:31 PM

Content

View in new tab
#FusionName JunctionReadCount SpanningFragCount est_J est_S LeftGene LeftLocalBreakpoint LeftBreakpoint RightGene RightLocalBreakpoint RightBreakpoint SpliceType LargeAnchorSupport NumCounterFusionLeft NumCounterFusionRight FAR_left FAR_right LeftBreakDinuc LeftBreakEntropy RightBreakDinuc RightBreakEntropy FFPM microh_brkpt_dist num_microh_near_brkpt
SLC34A2--ROS1 1088 23 1088.00 22.29 SLC34A2^ENSG00000157765.13 6084 chr4:25664330:+ ROS1^ENSG00000047936.11 54807 chr6:117329446:- ONLY_REF_SPLICE YES 1423 83 0.78 13.24 GT 1.8892 AG 1.9656 11.2425 2210 0
SLC34A2--ROS1 87 9 87.00 0.65 SLC34A2^ENSG00000157765.13 6084 chr4:25664330:+ ROS1^ENSG00000047936.11 58025 chr6:117324415:- ONLY_REF_SPLICE YES 1423 244 0.07 0.40 GT 1.8892 AG 1.7465 0.8875 999 0
SLC34A2--ROS1 7 9 7.00 0.05 SLC34A2^ENSG00000157765.13 6084 chr4:25664330:+ ROS1^ENSG00000047936.11 56834 chr6:117326414:- ONLY_REF_SPLICE YES 1423 280 0.01 0.06 GT 1.8892 AG 1.7232 0.0714 183 0
SLC34A2--ROS1 2 3 2.00 0.00 SLC34A2^ENSG00000157765.13 6084 chr4:25664330:+ ROS1^ENSG00000047936.11 59109 chr6:117321394:- ONLY_REF_SPLICE YES 1423 459 0.00 0.01 GT 1.8892 AG 1.9329 0.0203 2083 0
SLC34A2--ROS1 2 0 2.00 0.00 SLC34A2^ENSG00000157765.13 6084 chr4:25664330:+ ROS1^ENSG00000047936.11 67854 chr6:117288802:- ONLY_REF_SPLICE YES 1423 348 0.00 0.01 GT 1.8892 AG 1.7465 0.0203 1399 0
MYO5C--SHC4 279 9 279.00 8.94 MYO5C^ENSG00000128833.13 1195 chr15:52295610:- SHC4^ENSG00000185634.12 53802 chr15:48924949:- ONLY_REF_SPLICE YES 612 13 0.47 20.64 GT 1.9329 AG 1.8323 2.9156 3942 0
MYO5C--SHC4 6 3 6.00 0.06 MYO5C^ENSG00000128833.13 1195 chr15:52295610:- SHC4^ENSG00000185634.12 54873 chr15:48890811:- ONLY_REF_SPLICE YES 612 66 0.02 0.15 GT 1.9329 AG 1.8323 0.0614 4120 0
ANTXR1--AC011897.1 245 9 245.00 9.00 ANTXR1^ENSG00000169604.21 28922 chr2:69170289:+ AC011897.1^ENSG00000228505.5 41503 chr2:14616428:+ ONLY_REF_SPLICE YES 461 0 0.55 255.00 GT 1.6402 AG 1.8256 2.5719 2211 0
CCDC6--RET 163 10 163.00 10.00 CCDC6^ENSG00000108091.11 1435 chr10:59906122:- RET^ENSG00000165731.20 31587 chr10:43116584:+ ONLY_REF_SPLICE YES 1772 27 0.10 6.21 GT 1.8892 AG 1.8323 1.7518 2092 0
PANK2--MAVS 65 5 65.00 4.50 PANK2^ENSG00000125779.23 1890 chr20:3889728:+ MAVS^ENSG00000088888.18 22747 chr20:3854558:+ ONLY_REF_SPLICE YES 759 74 0.09 0.95 GT 1.5656 AG 1.5628 0.7038 1183 0
PANK2--MAVS 5 5 5.00 0.35 PANK2^ENSG00000125779.23 3266 chr20:3891411:+ MAVS^ENSG00000088888.18 22747 chr20:3854558:+ ONLY_REF_SPLICE YES 679 74 0.02 0.15 GT 1.8256 AG 1.5628 0.0541 1866 0
PANK2--MAVS 5 2 5.00 0.13 PANK2^ENSG00000125779.23 1890 chr20:3889728:+ MAVS^ENSG00000088888.18 23931 chr20:3857635:+ ONLY_REF_SPLICE YES 759 651 0.01 0.01 GT 1.5656 AG 1.8323 0.0519 68 1
PANK2--MAVS 1 2 1.00 0.03 PANK2^ENSG00000125779.23 1890 chr20:3889728:+ MAVS^ENSG00000088888.18 25106 chr20:3861332:+ ONLY_REF_SPLICE YES 759 871 0.01 0.00 GT 1.5656 AG 1.8323 0.0104 704 0
WAC--SFMBT2 64 1 64.00 1.00 WAC^ENSG00000095787.24 4265 chr10:28535757:+ SFMBT2^ENSG00000198879.12 35905 chr10:7285954:- ONLY_REF_SPLICE YES 810 61 0.08 1.06 GT 1.3383 AG 1.7232 0.6581 693 0
TVP23C--CDRT4 49 1 49.00 0.44 TVP23C^ENSG00000175106.17 14926 chr17:15503098:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- INCL_NON_REF_SPLICE YES 59 9 0.85 5.10 GT 1.9329 AG 1.9899 0.5007 1215 0
TVP23C--CDRT4 21 1 21.00 0.19 TVP23C^ENSG00000175106.17 7982 chr17:15540433:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- ONLY_REF_SPLICE YES 374 9 0.06 2.30 GT 1.8323 AG 1.9899 0.2145 2126 0
TVP23C--CDRT4 14 1 14.00 0.12 TVP23C^ENSG00000175106.17 6853 chr17:15545785:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- ONLY_REF_SPLICE YES 195 9 0.08 1.60 GT 1.9086 AG 1.9899 0.143 1774 0
TVP23C--CDRT4 13 1 13.00 0.12 TVP23C^ENSG00000175106.17 14926 chr17:15503098:- CDRT4^ENSG00000239704.11 23702 chr17:15438200:- INCL_NON_REF_SPLICE YES 59 25 0.25 0.58 GT 1.9329 AG 1.6402 0.1328 137 0
TVP23C--CDRT4 8 1 8.00 0.07 TVP23C^ENSG00000175106.17 7982 chr17:15540433:- CDRT4^ENSG00000239704.11 23702 chr17:15438200:- ONLY_REF_SPLICE YES 374 25 0.03 0.38 GT 1.8323 AG 1.6402 0.0817 1363 0
TVP23C--CDRT4 3 1 3.00 0.03 TVP23C^ENSG00000175106.17 12676 chr17:15516419:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- ONLY_REF_SPLICE YES 45 9 0.11 0.50 GT 1.8892 AG 1.9899 0.0307 1949 0
TVP23C--CDRT4 2 1 2.00 0.02 TVP23C^ENSG00000175106.17 6853 chr17:15545785:- CDRT4^ENSG00000239704.11 21051 chr17:15453085:- ONLY_REF_SPLICE YES 195 0 0.02 4.00 GT 1.9086 AG 1.8892 0.0205 1679 0
TVP23C--CDRT4 1 1 1.00 0.01 TVP23C^ENSG00000175106.17 6853 chr17:15545785:- CDRT4^ENSG00000239704.11 23702 chr17:15438200:- ONLY_REF_SPLICE NO 195 25 0.02 0.12 GT 1.9086 AG 1.6402 0.0102 697 0
TVP23C--CDRT4 1 1 1.00 0.01 TVP23C^ENSG00000175106.17 12676 chr17:15516419:- CDRT4^ENSG00000239704.11 23702 chr17:15438200:- ONLY_REF_SPLICE YES 45 25 0.07 0.12 GT 1.8892 AG 1.6402 0.0102 873 0
TCF7L2--AL158212.1 48 2 48.00 1.66 TCF7L2^ENSG00000148737.17 4532 chr10:113040126:+ AL158212.1^ENSG00000225292.2 28779 chr10:112888735:+ ONLY_REF_SPLICE YES 666 0 0.08 51.00 GT 1.9219 AG 1.8892 0.5028 3386 0
TCF7L2--AL158212.1 9 1 9.00 0.14 TCF7L2^ENSG00000148737.17 4532 chr10:113040126:+ AL158212.1^ENSG00000225292.2 30959 chr10:112905977:+ ONLY_REF_SPLICE YES 666 1 0.02 5.50 GT 1.9219 AG 1.9899 0.0925 3331 0
TCF7L2--AL158212.1 4 1 4.00 0.06 TCF7L2^ENSG00000148737.17 4532 chr10:113040126:+ AL158212.1^ENSG00000225292.2 29852 chr10:112890966:+ ONLY_REF_SPLICE YES 666 1 0.01 3.00 GT 1.9219 AG 1.9329 0.0411 3179 0
TCF7L2--AL158212.1 3 3 3.00 1.14 TCF7L2^ENSG00000148737.17 5676 chr10:113089540:+ AL158212.1^ENSG00000225292.2 28779 chr10:112888735:+ ONLY_REF_SPLICE YES 542 0 0.01 7.00 GT 1.9086 AG 1.8892 0.0419 4477 0
PPL--SEC14L5 44 6 44.00 6.00 PPL^ENSG00000118898.16 10903 chr16:4895261:- SEC14L5^ENSG00000103184.12 28506 chr16:4987557:+ ONLY_REF_SPLICE YES 515 8 0.10 5.67 GT 1.6729 AG 1.9329 0.5063 368 0
C18orf25--GREB1L 30 5 30.00 4.97 C18orf25^ENSG00000152242.11 11819 chr18:46253823:+ GREB1L^ENSG00000141449.15 22304 chr18:21366027:+ ONLY_REF_SPLICE YES 232 19 0.15 1.80 GT 1.8892 AG 1.9219 0.3541 1922 0
C18orf25--GREB1L 1 1 1.00 0.03 C18orf25^ENSG00000152242.11 11819 chr18:46253823:+ GREB1L^ENSG00000141449.15 23414 chr18:21383510:+ ONLY_REF_SPLICE NO 232 80 0.01 0.04 GT 1.8892 AG 1.7465 0.0104 814 0
CHMP1A--FANCA 24 0 24.00 0.00 CHMP1A^ENSG00000131165.16 1157 chr16:89657582:- FANCA^ENSG00000187741.15 45627 chr16:89752222:- ONLY_REF_SPLICE YES 1014 446 0.02 0.06 GT 1.8892 AG 1.9329 0.243 1172 0
CHMP1A--FANCA 2 0 2.00 0.00 CHMP1A^ENSG00000131165.16 1157 chr16:89657582:- FANCA^ENSG00000187741.15 46712 chr16:89749902:- ONLY_REF_SPLICE YES 1014 497 0.00 0.01 GT 1.8892 AG 1.8892 0.0203 287 0
CHMP1A--FANCA 1 0 1.00 0.00 CHMP1A^ENSG00000131165.16 1157 chr16:89657582:- FANCA^ENSG00000187741.15 47847 chr16:89748767:- ONLY_REF_SPLICE YES 1014 523 0.00 0.00 GT 1.8892 AG 1.6402 0.0101 1109 0
CENPM--PACSIN2 23 1 23.00 1.00 CENPM^ENSG00000100162.15 4324 chr22:41943610:- PACSIN2^ENSG00000100266.19 16791 chr22:42912157:- ONLY_REF_SPLICE YES 736 184 0.03 0.14 GT 1.9656 AG 1.8295 0.243 3140 0
CENPM--PACSIN2 10 0 10.00 0.00 CENPM^ENSG00000100162.15 2928 chr22:41945225:- PACSIN2^ENSG00000100266.19 16791 chr22:42912157:- ONLY_REF_SPLICE YES 1073 184 0.01 0.06 GT 1.8892 AG 1.8295 0.1013 4260 0
PEX3--AIG1 23 1 23.00 1.00 PEX3^ENSG00000034693.15 2443 chr6:143459216:+ AIG1^ENSG00000146416.19 27389 chr6:143333282:+ ONLY_REF_SPLICE YES 132 331 0.19 0.08 GT 1.9656 AG 1.6402 0.243 2434 0
EFNA5--IKBKB 22 0 22.00 0.00 EFNA5^ENSG00000184349.14 1449 chr5:107670489:- IKBKB^ENSG00000104365.16 18065 chr8:42290156:+ ONLY_REF_SPLICE YES 397 552 0.06 0.04 GT 1.5058 AG 1.6402 0.2228 2477 0
EFNA5--IKBKB 1 0 1.00 0.00 EFNA5^ENSG00000184349.14 1449 chr5:107670489:- IKBKB^ENSG00000104365.16 16970 chr8:42288634:+ ONLY_REF_SPLICE YES 397 593 0.01 0.00 GT 1.5058 AG 1.7056 0.0101 1399 0
B9D1--CD82 21 1 21.00 1.00 B9D1^ENSG00000108641.19 11886 chr17:19343790:- CD82^ENSG00000085117.12 32249 chr11:44600158:+ ONLY_REF_SPLICE YES 280 281 0.08 0.08 GT 1.6402 AG 1.8892 0.2227 1090 0
B9D1--CD82 4 0 4.00 0.00 B9D1^ENSG00000108641.19 10495 chr17:19347269:- CD82^ENSG00000085117.12 32249 chr11:44600158:+ ONLY_REF_SPLICE YES 218 281 0.02 0.02 GT 1.8892 AG 1.8892 0.0405 1837 0
DDX1--AC068286.1 18 1 18.00 1.00 DDX1^ENSG00000079785.16 12466 chr2:15607313:+ AC068286.1^ENSG00000235127.1 31644 chr2:14890795:- ONLY_REF_SPLICE YES 2084 0 0.01 20.00 GT 1.6895 AG 1.8295 0.1924 3948 0
DDX1--AC068286.1 6 0 6.00 0.00 DDX1^ENSG00000079785.16 12466 chr2:15607313:+ AC068286.1^ENSG00000235127.1 31786 chr2:14890653:- INCL_NON_REF_SPLICE YES 2084 1 0.00 3.50 GT 1.6895 AG 1.9086 0.0608 3945 0
DDX1--AC068286.1 6 0 6.00 0.00 DDX1^ENSG00000079785.16 12466 chr2:15607313:+ AC068286.1^ENSG00000235127.1 31789 chr2:14890650:- INCL_NON_REF_SPLICE YES 2084 1 0.00 3.50 GT 1.6895 AG 1.9899 0.0608 3945 0
DDX1--AC068286.1 4 0 4.00 0.00 DDX1^ENSG00000079785.16 12466 chr2:15607313:+ AC068286.1^ENSG00000235127.1 32911 chr2:14886754:- ONLY_REF_SPLICE YES 2084 0 0.00 5.00 GT 1.6895 AG 1.8256 0.0405 4093 0
ZNF227--GAB2 18 0 18.00 0.00 ZNF227^ENSG00000131115.16 3054 chr19:44213244:+ GAB2^ENSG00000033327.13 19875 chr11:78280901:- ONLY_REF_SPLICE YES 98 103 0.19 0.18 GT 1.7465 AG 1.8256 0.1823 357 0
ZNF227--GAB2 1 0 1.00 0.00 ZNF227^ENSG00000131115.16 3054 chr19:44213244:+ GAB2^ENSG00000033327.13 16589 chr11:78364103:- ONLY_REF_SPLICE YES 98 93 0.02 0.02 GT 1.7465 AG 1.8323 0.0101 1754 0
FANCA--CDK10 17 2 17.00 1.03 FANCA^ENSG00000187741.15 29280 chr16:89758577:- CDK10^ENSG00000185324.22 48665 chr16:89689252:+ ONLY_REF_SPLICE YES 441 420 0.05 0.05 GT 1.9656 AG 1.7968 0.1825 2179 0
FANCA--CDK10 16 2 16.00 0.97 FANCA^ENSG00000187741.15 29280 chr16:89758577:- CDK10^ENSG00000185324.22 49966 chr16:89690553:+ ONLY_REF_SPLICE YES 441 650 0.04 0.03 GT 1.9656 AG 1.7819 0.1718 1852 0
FANCA--CDK10 2 0 2.00 0.00 FANCA^ENSG00000187741.15 28151 chr16:89761949:- CDK10^ENSG00000185324.22 49966 chr16:89690553:+ ONLY_REF_SPLICE YES 411 650 0.01 0.00 GT 1.9656 AG 1.7819 0.0203 2141 0
KLRC4--KLRK1 13 0 13.00 0.00 KLRC4^ENSG00000183542.5 3122 chr12:10407636:- KLRK1^ENSG00000213809.9 8583 chr12:10388875:- INCL_NON_REF_SPLICE YES 6 6 2.00 2.00 GT 1.3996 AG 1.9219 0.1316 1207 0
MGA--GABRB3 10 0 10.00 0.00 MGA^ENSG00000174197.16 13640 chr15:41713496:+ GABRB3^ENSG00000166206.15 62154 chr15:26621534:- ONLY_REF_SPLICE YES 56 124 0.19 0.09 GT 1.7232 AG 1.8256 0.1013 1872 0
MGA--GABRB3 2 0 2.00 0.00 MGA^ENSG00000174197.16 13640 chr15:41713496:+ GABRB3^ENSG00000166206.15 57529 chr15:26642528:- ONLY_REF_SPLICE YES 56 87 0.05 0.03 GT 1.7232 AG 1.9656 0.0203 2379 0
THAP12--ACO1 10 0 10.00 0.00 THAP12^ENSG00000137492.8 1385 chr11:76380748:- ACO1^ENSG00000122729.19 20094 chr9:32405485:+ ONLY_REF_SPLICE YES 503 235 0.02 0.05 GT 1.7056 AG 1.9329 0.1013 2186 0
MIPOL1--TTC6 8 0 8.00 0.00 MIPOL1^ENSG00000151338.18 26327 chr14:37422949:+ TTC6^ENSG00000139865.16 52795 chr14:37680151:+ ONLY_REF_SPLICE YES 62 9 0.14 0.90 GT 1.9656 AG 1.6402 0.081 2448 0
ZDHHC9--AL034405.1 8 0 8.00 0.00 ZDHHC9^ENSG00000188706.13 2953 chrX:129841779:- AL034405.1^ENSG00000235189.2 20123 chrX:129929895:- ONLY_REF_SPLICE YES 597 0 0.02 9.00 GT 1.6895 AG 1.7465 0.081 2182 0
56 rows