AIH curated blacklist: matched 4 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 59
Pass (FILTER=PASS): 4 (6.8%)
Fail (FILTER=FAIL): 55 (93.2%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 4
All 4 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 12
confidence_below_min(medium<high): 11
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 6
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 4
confidence_below_min(medium<high);aih_curated_blacklist: 3
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 3
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 3
confidence_below_min(medium<high);total_reads_below_min(2.0<8.0): 2
confidence_below_min(low<high): 2
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 2
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 2
total_reads_below_min(4.0<8.0): 1
total_reads_below_min(3.0<8.0): 1
confidence_below_min(medium<high);total_reads_below_min(7.0<8.0);aih_curated_blacklist: 1
confidence_below_min(low<high);total_reads_below_min(6.0<8.0): 1
Breakdown by confidence:
high: 4 pass, 2 fail (total: 6)
low: 0 pass, 21 fail (total: 21)
medium: 0 pass, 32 fail (total: 32)
Arriba filter: 59 rows -> 4 PASS; wrote 659_6i-T1-TRNA-1_B23WHTKLT4_1.arriba.fusions.filtered.tsv and 659_6i-T1-TRNA-1_B23WHTKLT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: 659_6i-T1-TRNA-1_B23WHTKLT4_1.arriba.fusions.filter_summary.txt