Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/starfusion/ctat_genome_lib_build_dir
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f4/dd58801bf08ef24adae620978e1d88/.command.sh
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f4/dd58801bf08ef24adae620978e1d88/.command.run
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/9c/97468523f5d3031815ea27ed4edbc3/659_cfy-T1-TRNA-1_B23WHTKLT4_1_1.fastp.fastq.gz
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/9c/97468523f5d3031815ea27ed4edbc3/659_cfy-T1-TRNA-1_B23WHTKLT4_1_2.fastp.fastq.gz
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/11/6cdc19ff3f7620d483a1aa92bb0406/659_cfy-T1-TRNA-1_B23WHTKLT4_1.Chimeric.out.junction
==> STAGING COMPLETE (6 inputs)
-ctat genome lib [/tmp/nxf.1WGLE9vO6V/ctat_genome_lib_build_dir] validates.
CMD: mkdir -p /tmp/nxf.1WGLE9vO6V/./_starF_checkpoints
CMD: mkdir -p /tmp/nxf.1WGLE9vO6V/./star-fusion.preliminary
-sample contains 98564713 rnaseq fragments
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes --genome_lib_dir /tmp/nxf.1WGLE9vO6V/ctat_genome_lib_build_dir -J /tmp/nxf.1WGLE9vO6V/659_cfy-T1-TRNA-1_B23WHTKLT4_1.Chimeric.out.junction -O /tmp/nxf.1WGLE9vO6V/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4
-parsing fusion evidence: /tmp/nxf.1WGLE9vO6V/659_cfy-T1-TRNA-1_B23WHTKLT4_1.Chimeric.out.junction
-building interval tree based on /tmp/nxf.1WGLE9vO6V/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes
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[690000], rate=50426.31/min -building interval tree based on /tmp/nxf.1WGLE9vO6V/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes
[10000], rate=54545.45/min
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[680000], rate=48000.00/min -building interval tree based on /tmp/nxf.1WGLE9vO6V/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes
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[680000], rate=47331.79/min -building interval tree based on /tmp/nxf.1WGLE9vO6V/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.05 min).
-mapping reads to genes
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[680000], rate=37465.56/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads -J /tmp/nxf.1WGLE9vO6V/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --genome_lib_dir /tmp/nxf.1WGLE9vO6V/ctat_genome_lib_build_dir --filt_file /tmp/nxf.1WGLE9vO6V/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail -M 50 > /tmp/nxf.1WGLE9vO6V/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-parsing /tmp/nxf.1WGLE9vO6V/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info.
0.00 reads per min processed...
6000000.00 reads per min processed...
4500000.00 reads per min processed...
4000000.00 reads per min processed...
3750000.00 reads per min processed...
4000000.00 reads per min processed...
3500000.00 reads per min processed...
3692307.69 reads per min processed...
3600000.00 reads per min processed...
3750000.00 reads per min processed...
3666666.67 reads per min processed...
3789473.68 reads per min processed...
3900000.00 reads per min processed...
3818181.82 reads per min processed...
3913043.48 reads per min processed...
3840000.00 reads per min processed...
3923076.92 reads per min processed...
3857142.86 reads per min processed...
3931034.48 reads per min processed...
3870967.74 reads per min processed...
done.
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict -J /tmp/nxf.1WGLE9vO6V/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -O /tmp/nxf.1WGLE9vO6V/./star-fusion.preliminary/star-fusion
-parsing fusion evidence: /tmp/nxf.1WGLE9vO6V/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-outputting fusion candidates to file: /tmp/nxf.1WGLE9vO6V/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter --fusion_preds /tmp/nxf.1WGLE9vO6V/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary -J /tmp/nxf.1WGLE9vO6V/659_cfy-T1-TRNA-1_B23WHTKLT4_1.Chimeric.out.junction --tmpdir /tmp --min_junction_reads 0 --min_sum_frags 1 --require_LDAS 0 --max_promiscuity 10 --min_pct_dom_promiscuity 20 --min_novel_junction_support 1 --min_alt_pct_junction 10 --aggregate_novel_junction_dist 5 --min_spanning_frags_only 1 --genome_lib_dir /tmp/nxf.1WGLE9vO6V/ctat_genome_lib_build_dir --out_prefix /tmp/nxf.1WGLE9vO6V/./star-fusion.preliminary/star-fusion
CMD: mkdir -p /tmp/nxf.1WGLE9vO6V/./star-fusion.preliminary/star-fusion.filter.intermediates_dir
EM: Starting log likelihood: -186975.892089
EM: Round [1] log likelihood: -186879.362977
EM: Round [2] log likelihood: -186848.589738
EM: Round [3] log likelihood: -186834.070150
EM: Round [4] log likelihood: -186826.186175
EM: Round [5] log likelihood: -186821.550500
EM: Round [6] log likelihood: -186818.653695
EM: Round [7] log likelihood: -186816.742874
EM: Round [8] log likelihood: -186815.420251
EM: Round [9] log likelihood: -186814.466149
EM: Round [10] log likelihood: -186813.753795
EM: Round [11] log likelihood: -186813.206690
EM: Round [12] log likelihood: -186812.776635
EM: Round [13] log likelihood: -186812.432028
EM: Round [14] log likelihood: -186812.151401
EM: Round [15] log likelihood: -186811.919706
EM: Round [16] log likelihood: -186811.726120
EM: Round [17] log likelihood: -186811.562672
EM: Round [18] log likelihood: -186811.423384
EM: Round [19] log likelihood: -186811.303693
EM: Round [20] log likelihood: -186811.200066
EM: Round [21] log likelihood: -186811.109731
EM: Round [22] log likelihood: -186811.030490
EM: Round [23] log likelihood: -186810.960581
EM: Round [24] log likelihood: -186810.898576
EM: Round [25] log likelihood: -186810.843311
EM: Round [26] log likelihood: -186810.793828
EM: Round [27] log likelihood: -186810.749332
EM: Round [28] log likelihood: -186810.709159
EM: Round [29] log likelihood: -186810.672754
EM: Round [30] log likelihood: -186810.639644
EM: Round [31] log likelihood: -186810.609431
EM: Round [32] log likelihood: -186810.581774
EM: Round [33] log likelihood: -186810.556380
EM: Round [34] log likelihood: -186810.532997
EM: Round [35] log likelihood: -186810.511408
EM: Round [36] log likelihood: -186810.491424
EM: Round [37] log likelihood: -186810.472880
EM: Round [38] log likelihood: -186810.455631
EM: Round [39] log likelihood: -186810.439553
EM: Round [40] log likelihood: -186810.424534
EM: Round [41] log likelihood: -186810.410477
EM: Round [42] log likelihood: -186810.397294
EM: Round [43] log likelihood: -186810.384910
EM: Round [44] log likelihood: -186810.373255
EM: Round [45] log likelihood: -186810.362270
EM: Round [46] log likelihood: -186810.351900
EM: Round [47] log likelihood: -186810.342097
EM: Round [48] log likelihood: -186810.332816
EM: Round [49] log likelihood: -186810.324019
EM: Round [50] log likelihood: -186810.315670
EM: Round [51] log likelihood: -186810.307738
EM: Round [52] log likelihood: -186810.300193
EM: Round [53] log likelihood: -186810.293010
EM: Round [54] log likelihood: -186810.286164
EM: Round [55] log likelihood: -186810.279633
EM: Round [56] log likelihood: -186810.273398
EM: Round [57] log likelihood: -186810.267441
EM: Round [58] log likelihood: -186810.261745
EM: Round [59] log likelihood: -186810.256295
EM: Round [60] log likelihood: -186810.251076
EM: Round [61] log likelihood: -186810.246076
EM: Round [62] log likelihood: -186810.241283
EM: Round [63] log likelihood: -186810.236685
EM: Round [64] log likelihood: -186810.232273
EM: Round [65] log likelihood: -186810.228036
EM: Round [66] log likelihood: -186810.223967
EM: Round [67] log likelihood: -186810.220056
EM: Round [68] log likelihood: -186810.216297
EM: Round [69] log likelihood: -186810.212681
EM: Round [70] log likelihood: -186810.209203
EM: Round [71] log likelihood: -186810.205855
EM: Round [72] log likelihood: -186810.202632
EM: Round [73] log likelihood: -186810.199528
EM: Round [74] log likelihood: -186810.196539
EM: Round [75] log likelihood: -186810.193658
EM: Round [76] log likelihood: -186810.190882
EM: Round [77] log likelihood: -186810.188206
EM: Round [78] log likelihood: -186810.185626
EM: Round [79] log likelihood: -186810.183137
EM: Round [80] log likelihood: -186810.180737
EM: Round [81] log likelihood: -186810.178422
EM: Round [82] log likelihood: -186810.176188
EM: Round [83] log likelihood: -186810.174031
EM: Round [84] log likelihood: -186810.171950
EM: Round [85] log likelihood: -186810.169941
EM: Round [86] log likelihood: -186810.168001
EM: Round [87] log likelihood: -186810.166128
EM: Round [88] log likelihood: -186810.164319
EM: Round [89] log likelihood: -186810.162572
EM: Round [90] log likelihood: -186810.160884
EM: Round [91] log likelihood: -186810.159254
EM: Round [92] log likelihood: -186810.157679
EM: Round [93] log likelihood: -186810.156157
EM: Round [94] log likelihood: -186810.154686
EM: Round [95] log likelihood: -186810.153264
EM: Round [96] log likelihood: -186810.151890
EM: Round [97] log likelihood: -186810.150563
EM: Round [98] log likelihood: -186810.149279
EM: Round [99] log likelihood: -186810.148038
EM: Round [100] log likelihood: -186810.146838
EM: Round [101] log likelihood: -186810.145679
EM: Round [102] log likelihood: -186810.144557
EM: Round [103] log likelihood: -186810.143473
EM: Round [104] log likelihood: -186810.142424
EM: Round [105] log likelihood: -186810.141410
EM: Round [106] log likelihood: -186810.140429
EM: Round [107] log likelihood: -186810.139481
EM: Round [108] log likelihood: -186810.138564
EM: Round [109] log likelihood: -186810.137676
EM: Round [110] log likelihood: -186810.136818
EM: Round [111] log likelihood: -186810.135988
EM: Round [112] log likelihood: -186810.135185
EM: Round [113] log likelihood: -186810.134408
EM: Round [114] log likelihood: -186810.133656
EM: Round [115] log likelihood: -186810.132929
EM: Round [116] log likelihood: -186810.132225
EM: Round [117] log likelihood: -186810.131545
EM: Round [118] log likelihood: -186810.130886
EM: Round [119] log likelihood: -186810.130249
EM: Round [120] log likelihood: -186810.129633
EM: Round [121] log likelihood: -186810.129036
EM: Round [122] log likelihood: -186810.128459
EM: Round [123] log likelihood: -186810.127900
EM: Round [124] log likelihood: -186810.127360
EM: Round [125] log likelihood: -186810.126836
EM: Round [126] log likelihood: -186810.126330
EM: Round [127] log likelihood: -186810.125840
EM: Round [128] log likelihood: -186810.125366
EM: Round [129] log likelihood: -186810.124907
EM: Round [130] log likelihood: -186810.124463
EM: Round [131] log likelihood: -186810.124033
EM: Round [132] log likelihood: -186810.123617
EM: Round [133] log likelihood: -186810.123215
EM: Round [134] log likelihood: -186810.122825
EM: Round [135] log likelihood: -186810.122448
EM: Round [136] log likelihood: -186810.122083
EM: Round [137] log likelihood: -186810.121730
EM: Round [138] log likelihood: -186810.121388
EM: Round [139] log likelihood: -186810.121057
EM: Round [140] log likelihood: -186810.120736
EM: Round [141] log likelihood: -186810.120426
EM: Round [142] log likelihood: -186810.120126
EM: Round [143] log likelihood: -186810.119835
EM: Round [144] log likelihood: -186810.119554
EM: Round [145] log likelihood: -186810.119281
EM: Round [146] log likelihood: -186810.119018
EM: Round [147] log likelihood: -186810.118763
EM: Round [148] log likelihood: -186810.118515
EM: Round [149] log likelihood: -186810.118276
EM: Round [150] log likelihood: -186810.118045
EM: Round [151] log likelihood: -186810.117821
EM: Round [152] log likelihood: -186810.117604
EM: Round [153] log likelihood: -186810.117394
EM: Round [154] log likelihood: -186810.117190
EM: Round [155] log likelihood: -186810.116993
EM: Round [156] log likelihood: -186810.116803
EM: Round [157] log likelihood: -186810.116618
EM: Round [158] log likelihood: -186810.116439
EM: Round [159] log likelihood: -186810.116267
EM: Round [160] log likelihood: -186810.116099
EM: Round [161] log likelihood: -186810.115937
EM: Round [162] log likelihood: -186810.115780
EM: Round [163] log likelihood: -186810.115628
EM: Round [164] log likelihood: -186810.115481
EM: Round [165] log likelihood: -186810.115338
EM: Round [166] log likelihood: -186810.115200
EM: Round [167] log likelihood: -186810.115067
EM: Round [168] log likelihood: -186810.114938
EM: Round [169] log likelihood: -186810.114812
EM: Round [170] log likelihood: -186810.114691
EM: Round [171] log likelihood: -186810.114574
EM: Round [172] log likelihood: -186810.114460
EM: Round [173] log likelihood: -186810.114350
EM: Round [174] log likelihood: -186810.114244
EM: Round [175] log likelihood: -186810.114140
EM: Round [176] log likelihood: -186810.114040
EM: Stopping iterations at round 176 due to insufficient improvement in likelihood.
EM: Starting log likelihood: -185581.384955
EM: Round [1] log likelihood: -185509.731076
EM: Round [2] log likelihood: -185485.583290
EM: Round [3] log likelihood: -185474.519288
EM: Round [4] log likelihood: -185468.579700
EM: Round [5] log likelihood: -185465.070581
EM: Round [6] log likelihood: -185462.845555
EM: Round [7] log likelihood: -185461.350491
EM: Round [8] log likelihood: -185460.296378
EM: Round [9] log likelihood: -185459.523328
EM: Round [10] log likelihood: -185458.938000
EM: Round [11] log likelihood: -185458.483124
EM: Round [12] log likelihood: -185458.121953
EM: Round [13] log likelihood: -185457.829976
EM: Round [14] log likelihood: -185457.590288
EM: Round [15] log likelihood: -185457.390898
EM: Round [16] log likelihood: -185457.223092
EM: Round [17] log likelihood: -185457.080408
EM: Round [18] log likelihood: -185456.957970
EM: Round [19] log likelihood: -185456.852038
EM: Round [20] log likelihood: -185456.759705
EM: Round [21] log likelihood: -185456.678684
EM: Round [22] log likelihood: -185456.607154
EM: Round [23] log likelihood: -185456.543651
EM: Round [24] log likelihood: -185456.486985
EM: Round [25] log likelihood: -185456.436182
EM: Round [26] log likelihood: -185456.390438
EM: Round [27] log likelihood: -185456.349082
EM: Round [28] log likelihood: -185456.311553
EM: Round [29] log likelihood: -185456.277377
EM: Round [30] log likelihood: -185456.246152
EM: Round [31] log likelihood: -185456.217535
EM: Round [32] log likelihood: -185456.191231
EM: Round [33] log likelihood: -185456.166987
EM: Round [34] log likelihood: -185456.144583
EM: Round [35] log likelihood: -185456.123828
EM: Round [36] log likelihood: -185456.104556
EM: Round [37] log likelihood: -185456.086621
EM: Round [38] log likelihood: -185456.069894
EM: Round [39] log likelihood: -185456.054263
EM: Round [40] log likelihood: -185456.039628
EM: Round [41] log likelihood: -185456.025900
EM: Round [42] log likelihood: -185456.013002
EM: Round [43] log likelihood: -185456.000862
EM: Round [44] log likelihood: -185455.989419
EM: Round [45] log likelihood: -185455.978617
EM: Round [46] log likelihood: -185455.968404
EM: Round [47] log likelihood: -185455.958738
EM: Round [48] log likelihood: -185455.949576
EM: Round [49] log likelihood: -185455.940881
EM: Round [50] log likelihood: -185455.932622
EM: Round [51] log likelihood: -185455.924768
EM: Round [52] log likelihood: -185455.917290
EM: Round [53] log likelihood: -185455.910166
EM: Round [54] log likelihood: -185455.903371
EM: Round [55] log likelihood: -185455.896885
EM: Round [56] log likelihood: -185455.890690
EM: Round [57] log likelihood: -185455.884767
EM: Round [58] log likelihood: -185455.879100
EM: Round [59] log likelihood: -185455.873676
EM: Round [60] log likelihood: -185455.868480
EM: Round [61] log likelihood: -185455.863500
EM: Round [62] log likelihood: -185455.858725
EM: Round [63] log likelihood: -185455.854143
EM: Round [64] log likelihood: -185455.849744
EM: Round [65] log likelihood: -185455.845520
EM: Round [66] log likelihood: -185455.841461
EM: Round [67] log likelihood: -185455.837559
EM: Round [68] log likelihood: -185455.833808
EM: Round [69] log likelihood: -185455.830199
EM: Round [70] log likelihood: -185455.826727
EM: Round [71] log likelihood: -185455.823385
EM: Round [72] log likelihood: -185455.820167
EM: Round [73] log likelihood: -185455.817068
EM: Round [74] log likelihood: -185455.814082
EM: Round [75] log likelihood: -185455.811205
EM: Round [76] log likelihood: -185455.808431
EM: Round [77] log likelihood: -185455.805758
EM: Round [78] log likelihood: -185455.803180
EM: Round [79] log likelihood: -185455.800694
EM: Round [80] log likelihood: -185455.798296
EM: Round [81] log likelihood: -185455.795982
EM: Round [82] log likelihood: -185455.793749
EM: Round [83] log likelihood: -185455.791594
EM: Round [84] log likelihood: -185455.789514
EM: Round [85] log likelihood: -185455.787506
EM: Round [86] log likelihood: -185455.785567
EM: Round [87] log likelihood: -185455.783694
EM: Round [88] log likelihood: -185455.781886
EM: Round [89] log likelihood: -185455.780140
EM: Round [90] log likelihood: -185455.778452
EM: Round [91] log likelihood: -185455.776823
EM: Round [92] log likelihood: -185455.775248
EM: Round [93] log likelihood: -185455.773726
EM: Round [94] log likelihood: -185455.772256
EM: Round [95] log likelihood: -185455.770835
EM: Round [96] log likelihood: -185455.769461
EM: Round [97] log likelihood: -185455.768133
EM: Round [98] log likelihood: -185455.766850
EM: Round [99] log likelihood: -185455.765609
EM: Round [100] log likelihood: -185455.764410
EM: Round [101] log likelihood: -185455.763250
EM: Round [102] log likelihood: -185455.762129
EM: Round [103] log likelihood: -185455.761045
EM: Round [104] log likelihood: -185455.759996
EM: Round [105] log likelihood: -185455.758983
EM: Round [106] log likelihood: -185455.758002
EM: Round [107] log likelihood: -185455.757054
EM: Round [108] log likelihood: -185455.756136
EM: Round [109] log likelihood: -185455.755249
EM: Round [110] log likelihood: -185455.754391
EM: Round [111] log likelihood: -185455.753561
EM: Round [112] log likelihood: -185455.752758
EM: Round [113] log likelihood: -185455.751981
EM: Round [114] log likelihood: -185455.751230
EM: Round [115] log likelihood: -185455.750503
EM: Round [116] log likelihood: -185455.749799
EM: Round [117] log likelihood: -185455.749119
EM: Round [118] log likelihood: -185455.748460
EM: Round [119] log likelihood: -185455.747823
EM: Round [120] log likelihood: -185455.747207
EM: Round [121] log likelihood: -185455.746610
EM: Round [122] log likelihood: -185455.746033
EM: Round [123] log likelihood: -185455.745475
EM: Round [124] log likelihood: -185455.744934
EM: Round [125] log likelihood: -185455.744411
EM: Round [126] log likelihood: -185455.743905
EM: Round [127] log likelihood: -185455.743415
EM: Round [128] log likelihood: -185455.742941
EM: Round [129] log likelihood: -185455.742483
EM: Round [130] log likelihood: -185455.742039
EM: Round [131] log likelihood: -185455.741609
EM: Round [132] log likelihood: -185455.741193
EM: Round [133] log likelihood: -185455.740790
EM: Round [134] log likelihood: -185455.740401
EM: Round [135] log likelihood: -185455.740024
EM: Round [136] log likelihood: -185455.739659
EM: Round [137] log likelihood: -185455.739306
EM: Round [138] log likelihood: -185455.738964
EM: Round [139] log likelihood: -185455.738633
EM: Round [140] log likelihood: -185455.738313
EM: Round [141] log likelihood: -185455.738002
EM: Round [142] log likelihood: -185455.737702
EM: Round [143] log likelihood: -185455.737412
EM: Round [144] log likelihood: -185455.737131
EM: Round [145] log likelihood: -185455.736858
EM: Round [146] log likelihood: -185455.736595
EM: Round [147] log likelihood: -185455.736340
EM: Round [148] log likelihood: -185455.736093
EM: Round [149] log likelihood: -185455.735854
EM: Round [150] log likelihood: -185455.735622
EM: Round [151] log likelihood: -185455.735398
EM: Round [152] log likelihood: -185455.735181
EM: Round [153] log likelihood: -185455.734971
EM: Round [154] log likelihood: -185455.734768
EM: Round [155] log likelihood: -185455.734571
EM: Round [156] log likelihood: -185455.734381
EM: Round [157] log likelihood: -185455.734197
EM: Round [158] log likelihood: -185455.734018
EM: Round [159] log likelihood: -185455.733845
EM: Round [160] log likelihood: -185455.733678
EM: Round [161] log likelihood: -185455.733516
EM: Round [162] log likelihood: -185455.733359
EM: Round [163] log likelihood: -185455.733207
EM: Round [164] log likelihood: -185455.733060
EM: Round [165] log likelihood: -185455.732918
EM: Round [166] log likelihood: -185455.732780
EM: Round [167] log likelihood: -185455.732646
EM: Round [168] log likelihood: -185455.732517
EM: Round [169] log likelihood: -185455.732392
EM: Round [170] log likelihood: -185455.732271
EM: Round [171] log likelihood: -185455.732154
EM: Round [172] log likelihood: -185455.732040
EM: Round [173] log likelihood: -185455.731930
EM: Round [174] log likelihood: -185455.731824
EM: Round [175] log likelihood: -185455.731721
EM: Round [176] log likelihood: -185455.731621
EM: Stopping iterations at round 176 due to insufficient improvement in likelihood.
CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.1WGLE9vO6V/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20 --fusion_preds /tmp/nxf.1WGLE9vO6V/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.1WGLE9vO6V/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.1WGLE9vO6V/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.1WGLE9vO6V/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.1WGLE9vO6V/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter --genome_lib_dir /tmp/nxf.1WGLE9vO6V/ctat_genome_lib_build_dir --max_promiscuity 10 --min_pct_dom_promiscuity 20
CMD: cp /tmp/nxf.1WGLE9vO6V/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.1WGLE9vO6V/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter
CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.1WGLE9vO6V/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.1WGLE9vO6V/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged
CMD: ln -sf /tmp/nxf.1WGLE9vO6V/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.1WGLE9vO6V/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered
* Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.1WGLE9vO6V/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 98564713 > /tmp/nxf.1WGLE9vO6V/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM
* Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.1WGLE9vO6V/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.1WGLE9vO6V/ctat_genome_lib_build_dir > /tmp/nxf.1WGLE9vO6V/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.1WGLE9vO6V/ctat_genome_lib_build_dir --annotate /tmp/nxf.1WGLE9vO6V/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.1WGLE9vO6V/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot
* Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.1WGLE9vO6V/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.1WGLE9vO6V/ctat_genome_lib_build_dir
-done, see /tmp/nxf.1WGLE9vO6V/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.1WGLE9vO6V/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.1WGLE9vO6V/ctat_genome_lib_build_dir
-filter_likely_RT_artifacts: (pass: 2482, filtered: 9400)
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.1WGLE9vO6V/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001
* Running CMD: cp /tmp/nxf.1WGLE9vO6V/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv
* Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.1WGLE9vO6V/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000233379.2]
WARNING, no entry stored in dbm for [ENSG00000247081.8]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000247081.8]
WARNING, no entry stored in dbm for [ENSG00000237296.9]
WARNING, no entry stored in dbm for [ENSG00000255332.8]
WARNING, no entry stored in dbm for [ENSG00000259755.1]
WARNING, no entry stored in dbm for [ENSG00000276758.1]
WARNING, no entry stored in dbm for [ENSG00000232894.1]
WARNING, no entry stored in dbm for [ENSG00000226049.3]
WARNING, no entry stored in dbm for [ENSG00000260404.3]
WARNING, no entry stored in dbm for [ENSG00000238124.1]
WARNING, no entry stored in dbm for [ENSG00000255332.8]
WARNING, no entry stored in dbm for [ENSG00000255332.8]
WARNING, no entry stored in dbm for [ENSG00000205534.6]
WARNING, no entry stored in dbm for [ENSG00000248927.1]
WARNING, no entry stored in dbm for [ENSG00000282057.1]
WARNING, no entry stored in dbm for [ENSG00000230116.1]
WARNING, no entry stored in dbm for [ENSG00000272097.2]
WARNING, no entry stored in dbm for [ENSG00000234715.2]
WARNING, no entry stored in dbm for [ENSG00000283537.2]
WARNING, no entry stored in dbm for [ENSG00000254951.7]
WARNING, no entry stored in dbm for [ENSG00000225178.5]
WARNING, no entry stored in dbm for [ENSG00000108442.2]
WARNING, no entry stored in dbm for [ENSG00000287920.1]
WARNING, no entry stored in dbm for [ENSG00000227681.5]
WARNING, no entry stored in dbm for [ENSG00000272030.1]
WARNING, no entry stored in dbm for [ENSG00000223508.5]
WARNING, no entry stored in dbm for [ENSG00000223508.5]
WARNING, no entry stored in dbm for [ENSG00000230559.1]
WARNING, no entry stored in dbm for [ENSG00000286027.1]
WARNING, no entry stored in dbm for [ENSG00000232527.8]
WARNING, no entry stored in dbm for [ENSG00000272779.1]
WARNING, no entry stored in dbm for [ENSG00000223823.1]
WARNING, no entry stored in dbm for [ENSG00000234261.4]
WARNING, no entry stored in dbm for [ENSG00000236373.2]
WARNING, no entry stored in dbm for [ENSG00000270255.1]
WARNING, no entry stored in dbm for [ENSG00000198237.8]
WARNING, no entry stored in dbm for [ENSG00000255332.8]
WARNING, no entry stored in dbm for [ENSG00000285417.1]
WARNING, no entry stored in dbm for [ENSG00000286546.1]
WARNING, no entry stored in dbm for [ENSG00000251314.2]
WARNING, no entry stored in dbm for [ENSG00000262869.1]
WARNING, no entry stored in dbm for [ENSG00000269032.1]
WARNING, no entry stored in dbm for [ENSG00000223508.5]
WARNING, no entry stored in dbm for [ENSG00000226472.8]
WARNING, no entry stored in dbm for [ENSG00000251595.7]
WARNING, no entry stored in dbm for [ENSG00000248958.2]
WARNING, no entry stored in dbm for [ENSG00000244306.11]
WARNING, no entry stored in dbm for [ENSG00000225594.1]
WARNING, no entry stored in dbm for [ENSG00000259456.4]
WARNING, no entry stored in dbm for [ENSG00000280171.1]
WARNING, no entry stored in dbm for [ENSG00000233593.10]
WARNING, no entry stored in dbm for [ENSG00000246203.2]
WARNING, no entry stored in dbm for [ENSG00000237149.5]
WARNING, no entry stored in dbm for [ENSG00000237149.5]
WARNING, no entry stored in dbm for [ENSG00000225470.8]
WARNING, no entry stored in dbm for [ENSG00000233515.2]
WARNING, no entry stored in dbm for [ENSG00000223509.8]
WARNING, no entry stored in dbm for [ENSG00000197320.5]
WARNING, no entry stored in dbm for [ENSG00000229807.12]
WARNING, no entry stored in dbm for [ENSG00000251003.9]
WARNING, no entry stored in dbm for [ENSG00000228335.1]
WARNING, no entry stored in dbm for [ENSG00000250802.7]
WARNING, no entry stored in dbm for [ENSG00000250802.7]
WARNING, no entry stored in dbm for [ENSG00000239407.5]
WARNING, no entry stored in dbm for [ENSG00000223546.7]
WARNING, no entry stored in dbm for [ENSG00000247572.8]
WARNING, no entry stored in dbm for [ENSG00000215583.3]
WARNING, no entry stored in dbm for [ENSG00000203825.4]
WARNING, no entry stored in dbm for [ENSG00000282458.1]
WARNING, no entry stored in dbm for [ENSG00000185596.16]
WARNING, no entry stored in dbm for [ENSG00000237499.7]
WARNING, no entry stored in dbm for [ENSG00000258232.2]
WARNING, no entry stored in dbm for [ENSG00000234650.6]
WARNING, no entry stored in dbm for [ENSG00000236790.6]
WARNING, no entry stored in dbm for [ENSG00000227494.2]
WARNING, no entry stored in dbm for [ENSG00000247228.3]
WARNING, no entry stored in dbm for [ENSG00000275139.1]
WARNING, no entry stored in dbm for [ENSG00000167747.15]
WARNING, no entry stored in dbm for [ENSG00000258742.6]
WARNING, no entry stored in dbm for [ENSG00000189136.9]
WARNING, no entry stored in dbm for [ENSG00000260144.1]
WARNING, no entry stored in dbm for [ENSG00000250227.1]
WARNING, no entry stored in dbm for [ENSG00000267506.5]
WARNING, no entry stored in dbm for [ENSG00000214222.2]
WARNING, no entry stored in dbm for [ENSG00000244627.5]
WARNING, no entry stored in dbm for [ENSG00000185641.6]
WARNING, no entry stored in dbm for [ENSG00000214881.4]
WARNING, no entry stored in dbm for [ENSG00000237590.1]
WARNING, no entry stored in dbm for [ENSG00000225793.3]
WARNING, no entry stored in dbm for [ENSG00000236611.1]
WARNING, no entry stored in dbm for [ENSG00000257286.1]
WARNING, no entry stored in dbm for [ENSG00000247708.8]
WARNING, no entry stored in dbm for [ENSG00000281501.1]
WARNING, no entry stored in dbm for [ENSG00000205583.13]
WARNING, no entry stored in dbm for [ENSG00000197558.13]
WARNING, no entry stored in dbm for [ENSG00000223984.1]
WARNING, no entry stored in dbm for [ENSG00000279771.1]
WARNING, no entry stored in dbm for [ENSG00000253204.1]
WARNING, no entry stored in dbm for [ENSG00000231185.7]
WARNING, no entry stored in dbm for [ENSG00000263072.8]
WARNING, no entry stored in dbm for [ENSG00000158482.10]
WARNING, no entry stored in dbm for [ENSG00000260413.1]
WARNING, no entry stored in dbm for [ENSG00000224185.1]
WARNING, no entry stored in dbm for [ENSG00000206937.1]
WARNING, no entry stored in dbm for [ENSG00000234040.3]
WARNING, no entry stored in dbm for [ENSG00000269893.8]
WARNING, no entry stored in dbm for [ENSG00000260260.1]
WARNING, no entry stored in dbm for [ENSG00000223806.8]
WARNING, no entry stored in dbm for [ENSG00000180747.15]
WARNING, no entry stored in dbm for [ENSG00000233937.7]
WARNING, no entry stored in dbm for [ENSG00000237296.9]
WARNING, no entry stored in dbm for [ENSG00000215790.8]
WARNING, no entry stored in dbm for [ENSG00000238286.1]
WARNING, no entry stored in dbm for [ENSG00000239224.3]
WARNING, no entry stored in dbm for [ENSG00000258792.4]
WARNING, no entry stored in dbm for [ENSG00000251034.2]
WARNING, no entry stored in dbm for [ENSG00000259673.6]
WARNING, no entry stored in dbm for [ENSG00000241007.1]
WARNING, no entry stored in dbm for [ENSG00000204894.4]
WARNING, no entry stored in dbm for [ENSG00000228463.10]
WARNING, no entry stored in dbm for [ENSG00000287411.1]
WARNING, no entry stored in dbm for [ENSG00000253541.1]
WARNING, no entry stored in dbm for [ENSG00000225588.2]
WARNING, no entry stored in dbm for [ENSG00000281131.1]
WARNING, no entry stored in dbm for [ENSG00000254534.1]
WARNING, no entry stored in dbm for [ENSG00000230937.12]
WARNING, no entry stored in dbm for [ENSG00000231368.1]
WARNING, no entry stored in dbm for [ENSG00000233836.7]
WARNING, no entry stored in dbm for [ENSG00000268483.1]
WARNING, no entry stored in dbm for [ENSG00000184139.8]
WARNING, no entry stored in dbm for [ENSG00000215869.4]
WARNING, no entry stored in dbm for [ENSG00000225404.2]
WARNING, no entry stored in dbm for [ENSG00000238015.2]
WARNING, no entry stored in dbm for [ENSG00000234524.1]
WARNING, no entry stored in dbm for [ENSG00000229824.1]
WARNING, no entry stored in dbm for [ENSG00000251754.1]
WARNING, no entry stored in dbm for [ENSG00000231259.5]
WARNING, no entry stored in dbm for [ENSG00000278834.1]
WARNING, no entry stored in dbm for [ENSG00000280007.1]
WARNING, no entry stored in dbm for [ENSG00000256625.1]
WARNING, no entry stored in dbm for [ENSG00000285835.1]
WARNING, no entry stored in dbm for [ENSG00000269386.5]
WARNING, no entry stored in dbm for [ENSG00000231856.2]
WARNING, no entry stored in dbm for [ENSG00000214182.5]
WARNING, no entry stored in dbm for [ENSG00000182257.8]
WARNING, no entry stored in dbm for [ENSG00000215105.4]
WARNING, no entry stored in dbm for [ENSG00000283480.1]
WARNING, no entry stored in dbm for [ENSG00000203739.4]
WARNING, no entry stored in dbm for [ENSG00000230937.12]
WARNING, no entry stored in dbm for [ENSG00000245694.10]
WARNING, no entry stored in dbm for [ENSG00000078319.10]
WARNING, no entry stored in dbm for [ENSG00000196796.5]
WARNING, no entry stored in dbm for [ENSG00000214176.9]
WARNING, no entry stored in dbm for [ENSG00000263724.2]
WARNING, no entry stored in dbm for [ENSG00000207044.1]
WARNING, no entry stored in dbm for [ENSG00000238197.6]
WARNING, no entry stored in dbm for [ENSG00000246640.1]
WARNING, no entry stored in dbm for [ENSG00000237604.1]
WARNING, no entry stored in dbm for [ENSG00000272595.2]
WARNING, no entry stored in dbm for [ENSG00000275967.1]
WARNING, no entry stored in dbm for [ENSG00000241472.7]
WARNING, no entry stored in dbm for [ENSG00000253796.2]
WARNING, no entry stored in dbm for [ENSG00000106133.18]
WARNING, no entry stored in dbm for [ENSG00000256299.1]
WARNING, no entry stored in dbm for [ENSG00000249619.1]
WARNING, no entry stored in dbm for [ENSG00000259275.4]
WARNING, no entry stored in dbm for [ENSG00000237187.9]
WARNING, no entry stored in dbm for [ENSG00000214807.2]
WARNING, no entry stored in dbm for [ENSG00000226703.1]
WARNING, no entry stored in dbm for [ENSG00000236991.6]
WARNING, no entry stored in dbm for [ENSG00000248092.8]
WARNING, no entry stored in dbm for [ENSG00000259374.2]
WARNING, no entry stored in dbm for [ENSG00000237296.9]
WARNING, no entry stored in dbm for [ENSG00000231881.2]
WARNING, no entry stored in dbm for [ENSG00000223804.5]
WARNING, no entry stored in dbm for [ENSG00000225674.1]
WARNING, no entry stored in dbm for [ENSG00000236051.7]
WARNING, no entry stored in dbm for [ENSG00000197984.4]
WARNING, no entry stored in dbm for [ENSG00000236833.1]
WARNING, no entry stored in dbm for [ENSG00000257509.1]
WARNING, no entry stored in dbm for [ENSG00000210135.1]
WARNING, no entry stored in dbm for [ENSG00000182796.14]
WARNING, no entry stored in dbm for [ENSG00000214955.5]
WARNING, no entry stored in dbm for [ENSG00000228195.2]
WARNING, no entry stored in dbm for [ENSG00000233006.8]
WARNING, no entry stored in dbm for [ENSG00000228526.7]
WARNING, no entry stored in dbm for [ENSG00000203709.12]
WARNING, no entry stored in dbm for [ENSG00000262454.4]
WARNING, no entry stored in dbm for [ENSG00000215417.13]
WARNING, no entry stored in dbm for [ENSG00000255248.9]
WARNING, no entry stored in dbm for [ENSG00000283240.1]
WARNING, no entry stored in dbm for [ENSG00000228109.1]
WARNING, no entry stored in dbm for [ENSG00000234381.1]
WARNING, no entry stored in dbm for [ENSG00000230246.7]
WARNING, no entry stored in dbm for [ENSG00000197880.9]
WARNING, no entry stored in dbm for [ENSG00000215068.8]
WARNING, no entry stored in dbm for [ENSG00000213468.7]
WARNING, no entry stored in dbm for [ENSG00000285091.1]
WARNING, no entry stored in dbm for [ENSG00000267278.6]
WARNING, no entry stored in dbm for [ENSG00000248973.3]
WARNING, no entry stored in dbm for [ENSG00000261722.1]
WARNING, no entry stored in dbm for [ENSG00000201955.1]
WARNING, no entry stored in dbm for [ENSG00000237149.5]
WARNING, no entry stored in dbm for [ENSG00000251513.2]
WARNING, no entry stored in dbm for [ENSG00000234476.3]
WARNING, no entry stored in dbm for [ENSG00000231680.1]
WARNING, no entry stored in dbm for [ENSG00000180712.4]
WARNING, no entry stored in dbm for [ENSG00000250490.1]
WARNING, no entry stored in dbm for [ENSG00000233396.8]
WARNING, no entry stored in dbm for [ENSG00000258602.1]
WARNING, no entry stored in dbm for [ENSG00000214900.11]
WARNING, no entry stored in dbm for [ENSG00000224310.1]
WARNING, no entry stored in dbm for [ENSG00000266554.2]
WARNING, no entry stored in dbm for [ENSG00000235172.8]
WARNING, no entry stored in dbm for [ENSG00000228262.10]
WARNING, no entry stored in dbm for [ENSG00000267220.1]
WARNING, no entry stored in dbm for [ENSG00000251396.7]
WARNING, no entry stored in dbm for [ENSG00000242512.9]
WARNING, no entry stored in dbm for [ENSG00000282508.2]
WARNING, no entry stored in dbm for [ENSG00000225269.3]
WARNING, no entry stored in dbm for [ENSG00000215190.9]
WARNING, no entry stored in dbm for [ENSG00000237945.7]
WARNING, no entry stored in dbm for [ENSG00000258955.2]
WARNING, no entry stored in dbm for [ENSG00000227036.8]
WARNING, no entry stored in dbm for [ENSG00000235621.9]
WARNING, no entry stored in dbm for [ENSG00000233237.8]
WARNING, no entry stored in dbm for [ENSG00000226240.2]
WARNING, no entry stored in dbm for [ENSG00000188185.13]
WARNING, no entry stored in dbm for [ENSG00000226806.1]
WARNING, no entry stored in dbm for [ENSG00000288091.1]
WARNING, no entry stored in dbm for [ENSG00000257495.5]
WARNING, no entry stored in dbm for [ENSG00000214514.8]
WARNING, no entry stored in dbm for [ENSG00000131885.17]
WARNING, no entry stored in dbm for [ENSG00000266820.1]
WARNING, no entry stored in dbm for [ENSG00000263647.1]
WARNING, no entry stored in dbm for [ENSG00000233652.1]
WARNING, no entry stored in dbm for [ENSG00000227195.11]
WARNING, no entry stored in dbm for [ENSG00000225014.1]
WARNING, no entry stored in dbm for [ENSG00000266179.2]
WARNING, no entry stored in dbm for [ENSG00000254034.2]
WARNING, no entry stored in dbm for [ENSG00000286675.1]
WARNING, no entry stored in dbm for [ENSG00000099869.8]
WARNING, no entry stored in dbm for [ENSG00000285929.1]
WARNING, no entry stored in dbm for [ENSG00000230399.1]
WARNING, no entry stored in dbm for [ENSG00000227733.10]
WARNING, no entry stored in dbm for [ENSG00000270362.1]
WARNING, no entry stored in dbm for [ENSG00000271959.1]
WARNING, no entry stored in dbm for [ENSG00000214922.9]
WARNING, no entry stored in dbm for [ENSG00000225465.10]
WARNING, no entry stored in dbm for [ENSG00000274602.5]
WARNING, no entry stored in dbm for [ENSG00000274471.2]
WARNING, no entry stored in dbm for [ENSG00000285763.1]
WARNING, no entry stored in dbm for [ENSG00000284627.1]
WARNING, no entry stored in dbm for [ENSG00000237125.11]
WARNING, no entry stored in dbm for [ENSG00000248205.1]
WARNING, no entry stored in dbm for [ENSG00000223383.1]
WARNING, no entry stored in dbm for [ENSG00000234945.8]
WARNING, no entry stored in dbm for [ENSG00000259251.2]
WARNING, no entry stored in dbm for [ENSG00000255082.1]
WARNING, no entry stored in dbm for [ENSG00000215571.5]
WARNING, no entry stored in dbm for [ENSG00000221819.6]
WARNING, no entry stored in dbm for [ENSG00000228393.4]
WARNING, no entry stored in dbm for [ENSG00000229608.1]
WARNING, no entry stored in dbm for [ENSG00000234880.1]
WARNING, no entry stored in dbm for [ENSG00000285693.1]
WARNING, no entry stored in dbm for [ENSG00000280401.1]
WARNING, no entry stored in dbm for [ENSG00000236283.5]
WARNING, no entry stored in dbm for [ENSG00000244300.3]
WARNING, no entry stored in dbm for [ENSG00000250330.1]
WARNING, no entry stored in dbm for [ENSG00000246523.8]
WARNING, no entry stored in dbm for [ENSG00000248834.2]
WARNING, no entry stored in dbm for [ENSG00000176840.12]
WARNING, no entry stored in dbm for [ENSG00000259673.6]
WARNING, no entry stored in dbm for [ENSG00000250848.1]
WARNING, no entry stored in dbm for [ENSG00000241207.1]
WARNING, no entry stored in dbm for [ENSG00000088340.17]
WARNING, no entry stored in dbm for [ENSG00000088340.17]
WARNING, no entry stored in dbm for [ENSG00000280136.2]
WARNING, no entry stored in dbm for [ENSG00000249252.5]
WARNING, no entry stored in dbm for [ENSG00000251600.8]
WARNING, no entry stored in dbm for [ENSG00000250227.1]
WARNING, no entry stored in dbm for [ENSG00000271270.7]
WARNING, no entry stored in dbm for [ENSG00000244026.6]
WARNING, no entry stored in dbm for [ENSG00000231528.3]
WARNING, no entry stored in dbm for [ENSG00000272142.4]
WARNING, no entry stored in dbm for [ENSG00000236438.7]
WARNING, no entry stored in dbm for [ENSG00000248019.3]
WARNING, no entry stored in dbm for [ENSG00000228630.5]
WARNING, no entry stored in dbm for [ENSG00000253405.1]
WARNING, no entry stored in dbm for [ENSG00000278916.1]
WARNING, no entry stored in dbm for [ENSG00000287469.1]
WARNING, no entry stored in dbm for [ENSG00000261555.1]
WARNING, no entry stored in dbm for [ENSG00000258232.2]
WARNING, no entry stored in dbm for [ENSG00000234996.4]
WARNING, no entry stored in dbm for [ENSG00000224610.1]
WARNING, no entry stored in dbm for [ENSG00000184991.3]
WARNING, no entry stored in dbm for [ENSG00000226472.8]
WARNING, no entry stored in dbm for [ENSG00000237296.9]
WARNING, no entry stored in dbm for [ENSG00000272168.8]
WARNING, no entry stored in dbm for [ENSG00000255332.8]
WARNING, no entry stored in dbm for [ENSG00000279913.1]
WARNING, no entry stored in dbm for [ENSG00000182397.14]
WARNING, no entry stored in dbm for [ENSG00000239899.3]
WARNING, no entry stored in dbm for [ENSG00000265802.2]
WARNING, no entry stored in dbm for [ENSG00000244642.3]
WARNING, no entry stored in dbm for [ENSG00000243951.1]
WARNING, no entry stored in dbm for [ENSG00000275090.1]
WARNING, no entry stored in dbm for [ENSG00000231607.13]
WARNING, no entry stored in dbm for [ENSG00000223653.6]
WARNING, no entry stored in dbm for [ENSG00000254275.6]
WARNING, no entry stored in dbm for [ENSG00000274423.1]
WARNING, no entry stored in dbm for [ENSG00000226950.8]
WARNING, no entry stored in dbm for [ENSG00000278903.3]
WARNING, no entry stored in dbm for [ENSG00000278903.3]
WARNING, no entry stored in dbm for [ENSG00000233025.1]
WARNING, no entry stored in dbm for [ENSG00000261801.6]
WARNING, no entry stored in dbm for [ENSG00000168992.4]
WARNING, no entry stored in dbm for [ENSG00000238161.1]
WARNING, no entry stored in dbm for [ENSG00000241956.10]
WARNING, no entry stored in dbm for [ENSG00000275029.1]
WARNING, no entry stored in dbm for [ENSG00000218502.3]
WARNING, no entry stored in dbm for [ENSG00000260284.1]
WARNING, no entry stored in dbm for [ENSG00000223478.1]
WARNING, no entry stored in dbm for [ENSG00000223745.8]
WARNING, no entry stored in dbm for [ENSG00000242609.1]
WARNING, no entry stored in dbm for [ENSG00000185596.16]
WARNING, no entry stored in dbm for [ENSG00000228146.8]
WARNING, no entry stored in dbm for [ENSG00000288685.1]
WARNING, no entry stored in dbm for [ENSG00000230185.5]
WARNING, no entry stored in dbm for [ENSG00000229807.12]
WARNING, no entry stored in dbm for [ENSG00000240869.3]
WARNING, no entry stored in dbm for [ENSG00000222041.11]
WARNING, no entry stored in dbm for [ENSG00000285756.2]
WARNING, no entry stored in dbm for [ENSG00000285756.2]
WARNING, no entry stored in dbm for [ENSG00000285756.2]
WARNING, no entry stored in dbm for [ENSG00000285756.2]
WARNING, no entry stored in dbm for [ENSG00000285756.2]
WARNING, no entry stored in dbm for [ENSG00000237480.3]
WARNING, no entry stored in dbm for [ENSG00000203808.12]
WARNING, no entry stored in dbm for [ENSG00000217801.10]
WARNING, no entry stored in dbm for [ENSG00000257261.6]
WARNING, no entry stored in dbm for [ENSG00000205534.6]
WARNING, no entry stored in dbm for [ENSG00000240089.2]
WARNING, no entry stored in dbm for [ENSG00000204960.7]
WARNING, no entry stored in dbm for [ENSG00000241743.4]
WARNING, no entry stored in dbm for [ENSG00000235831.7]
WARNING, no entry stored in dbm for [ENSG00000279249.3]
WARNING, no entry stored in dbm for [ENSG00000233967.7]
WARNING, no entry stored in dbm for [ENSG00000287447.1]
WARNING, no entry stored in dbm for [ENSG00000284740.1]
WARNING, no entry stored in dbm for [ENSG00000203650.9]
WARNING, no entry stored in dbm for [ENSG00000228564.2]
WARNING, no entry stored in dbm for [ENSG00000253502.1]
WARNING, no entry stored in dbm for [ENSG00000227883.1]
WARNING, no entry stored in dbm for [ENSG00000214331.8]
WARNING, no entry stored in dbm for [ENSG00000234062.8]
WARNING, no entry stored in dbm for [ENSG00000203650.9]
WARNING, no entry stored in dbm for [ENSG00000177699.4]
WARNING, no entry stored in dbm for [ENSG00000275613.2]
WARNING, no entry stored in dbm for [ENSG00000229010.1]
WARNING, no entry stored in dbm for [ENSG00000213653.4]
WARNING, no entry stored in dbm for [ENSG00000225285.1]
WARNING, no entry stored in dbm for [ENSG00000186481.16]
WARNING, no entry stored in dbm for [ENSG00000224905.7]
WARNING, no entry stored in dbm for [ENSG00000264964.2]
WARNING, no entry stored in dbm for [ENSG00000237296.9]
WARNING, no entry stored in dbm for [ENSG00000224745.1]
WARNING, no entry stored in dbm for [ENSG00000287421.1]
WARNING, no entry stored in dbm for [ENSG00000285799.1]
WARNING, no entry stored in dbm for [ENSG00000254741.1]
WARNING, no entry stored in dbm for [ENSG00000232576.2]
WARNING, no entry stored in dbm for [ENSG00000273443.1]
WARNING, no entry stored in dbm for [ENSG00000284640.1]
WARNING, no entry stored in dbm for [ENSG00000276997.4]
WARNING, no entry stored in dbm for [ENSG00000283480.1]
WARNING, no entry stored in dbm for [ENSG00000225096.3]
WARNING, no entry stored in dbm for [ENSG00000232499.2]
WARNING, no entry stored in dbm for [ENSG00000287398.1]
WARNING, no entry stored in dbm for [ENSG00000232347.1]
WARNING, no entry stored in dbm for [ENSG00000247287.3]
WARNING, no entry stored in dbm for [ENSG00000279608.1]
WARNING, no entry stored in dbm for [ENSG00000229559.2]
WARNING, no entry stored in dbm for [ENSG00000234648.1]
WARNING, no entry stored in dbm for [ENSG00000232573.1]
WARNING, no entry stored in dbm for [ENSG00000241720.2]
WARNING, no entry stored in dbm for [ENSG00000241720.2]
WARNING, no entry stored in dbm for [ENSG00000283773.1]
WARNING, no entry stored in dbm for [ENSG00000285858.1]
WARNING, no entry stored in dbm for [ENSG00000287895.1]
WARNING, no entry stored in dbm for [ENSG00000286546.1]
WARNING, no entry stored in dbm for [ENSG00000286546.1]
WARNING, no entry stored in dbm for [ENSG00000267220.1]
WARNING, no entry stored in dbm for [ENSG00000227486.2]
WARNING, no entry stored in dbm for [ENSG00000230149.2]
WARNING, no entry stored in dbm for [ENSG00000243289.1]
WARNING, no entry stored in dbm for [ENSG00000204177.10]
WARNING, no entry stored in dbm for [ENSG00000258730.1]
WARNING, no entry stored in dbm for [ENSG00000229800.1]
WARNING, no entry stored in dbm for [ENSG00000235181.1]
WARNING, no entry stored in dbm for [ENSG00000276216.1]
WARNING, no entry stored in dbm for [ENSG00000276216.1]
WARNING, no entry stored in dbm for [ENSG00000276170.4]
WARNING, no entry stored in dbm for [ENSG00000237550.5]
WARNING, no entry stored in dbm for [ENSG00000284964.1]
WARNING, no entry stored in dbm for [ENSG00000284964.1]
WARNING, no entry stored in dbm for [ENSG00000284964.1]
WARNING, no entry stored in dbm for [ENSG00000284964.1]
WARNING, no entry stored in dbm for [ENSG00000274423.1]
WARNING, no entry stored in dbm for [ENSG00000284964.1]
WARNING, no entry stored in dbm for [ENSG00000284964.1]
WARNING, no entry stored in dbm for [ENSG00000275557.1]
WARNING, no entry stored in dbm for [ENSG00000275140.1]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000230080.2]
WARNING, no entry stored in dbm for [ENSG00000229930.1]
WARNING, no entry stored in dbm for [ENSG00000250999.2]
WARNING, no entry stored in dbm for [ENSG00000215302.8]
WARNING, no entry stored in dbm for [ENSG00000215302.8]
WARNING, no entry stored in dbm for [ENSG00000215302.8]
WARNING, no entry stored in dbm for [ENSG00000275374.1]
WARNING, no entry stored in dbm for [ENSG00000260261.2]
WARNING, no entry stored in dbm for [ENSG00000262728.6]
WARNING, no entry stored in dbm for [ENSG00000213956.4]
WARNING, no entry stored in dbm for [ENSG00000279602.1]
WARNING, no entry stored in dbm for [ENSG00000238273.3]
WARNING, no entry stored in dbm for [ENSG00000253616.5]
WARNING, no entry stored in dbm for [ENSG00000288067.1]
WARNING, no entry stored in dbm for [ENSG00000275322.1]
WARNING, no entry stored in dbm for [ENSG00000259635.1]
WARNING, no entry stored in dbm for [ENSG00000231873.2]
WARNING, no entry stored in dbm for [ENSG00000241593.5]
WARNING, no entry stored in dbm for [ENSG00000230869.1]
WARNING, no entry stored in dbm for [ENSG00000273328.5]
WARNING, no entry stored in dbm for [ENSG00000228452.1]
WARNING, no entry stored in dbm for [ENSG00000231057.4]
WARNING, no entry stored in dbm for [ENSG00000249741.2]
WARNING, no entry stored in dbm for [ENSG00000260167.1]
WARNING, no entry stored in dbm for [ENSG00000233184.7]
WARNING, no entry stored in dbm for [ENSG00000268362.6]
WARNING, no entry stored in dbm for [ENSG00000269001.2]
WARNING, no entry stored in dbm for [ENSG00000285035.1]
WARNING, no entry stored in dbm for [ENSG00000285077.2]
WARNING, no entry stored in dbm for [ENSG00000284783.1]
WARNING, no entry stored in dbm for [ENSG00000285035.1]
WARNING, no entry stored in dbm for [ENSG00000259363.6]
WARNING, no entry stored in dbm for [ENSG00000280828.1]
WARNING, no entry stored in dbm for [ENSG00000267305.2]
WARNING, no entry stored in dbm for [ENSG00000242536.2]
WARNING, no entry stored in dbm for [ENSG00000231747.1]
WARNING, no entry stored in dbm for [ENSG00000231903.1]
WARNING, no entry stored in dbm for [ENSG00000225205.5]
WARNING, no entry stored in dbm for [ENSG00000288663.1]
WARNING, no entry stored in dbm for [ENSG00000283537.2]
WARNING, no entry stored in dbm for [ENSG00000228222.1]
WARNING, no entry stored in dbm for [ENSG00000267102.1]
WARNING, no entry stored in dbm for [ENSG00000260035.1]
WARNING, no entry stored in dbm for [ENSG00000259932.1]
WARNING, no entry stored in dbm for [ENSG00000229212.8]
WARNING, no entry stored in dbm for [ENSG00000257894.2]
WARNING, no entry stored in dbm for [ENSG00000257817.2]
WARNING, no entry stored in dbm for [ENSG00000188002.10]
WARNING, no entry stored in dbm for [ENSG00000188002.10]
WARNING, no entry stored in dbm for [ENSG00000259098.1]
WARNING, no entry stored in dbm for [ENSG00000215263.2]
WARNING, no entry stored in dbm for [ENSG00000240674.1]
WARNING, no entry stored in dbm for [ENSG00000259354.5]
WARNING, no entry stored in dbm for [ENSG00000177738.4]
WARNING, no entry stored in dbm for [ENSG00000248538.8]
WARNING, no entry stored in dbm for [ENSG00000268093.1]
WARNING, no entry stored in dbm for [ENSG00000272800.3]
WARNING, no entry stored in dbm for [ENSG00000253907.1]
WARNING, no entry stored in dbm for [ENSG00000268516.2]
WARNING, no entry stored in dbm for [ENSG00000236283.5]
WARNING, no entry stored in dbm for [ENSG00000285106.2]
WARNING, no entry stored in dbm for [ENSG00000261329.6]
WARNING, no entry stored in dbm for [ENSG00000249406.3]
WARNING, no entry stored in dbm for [ENSG00000288604.1]
WARNING, no entry stored in dbm for [ENSG00000232386.9]
WARNING, no entry stored in dbm for [ENSG00000232386.9]
WARNING, no entry stored in dbm for [ENSG00000261526.2]
WARNING, no entry stored in dbm for [ENSG00000225889.9]
WARNING, no entry stored in dbm for [ENSG00000277977.1]
WARNING, no entry stored in dbm for [ENSG00000286608.1]
WARNING, no entry stored in dbm for [ENSG00000256594.8]
WARNING, no entry stored in dbm for [ENSG00000282890.1]
WARNING, no entry stored in dbm for [ENSG00000068781.21]
WARNING, no entry stored in dbm for [ENSG00000253133.2]
WARNING, no entry stored in dbm for [ENSG00000238045.9]
WARNING, no entry stored in dbm for [ENSG00000262202.4]
WARNING, no entry stored in dbm for [ENSG00000262420.3]
WARNING, no entry stored in dbm for [ENSG00000261094.2]
WARNING, no entry stored in dbm for [ENSG00000228509.6]
WARNING, no entry stored in dbm for [ENSG00000286297.1]
WARNING, no entry stored in dbm for [ENSG00000266869.2]
WARNING, no entry stored in dbm for [ENSG00000266869.2]
WARNING, no entry stored in dbm for [ENSG00000267469.1]
WARNING, no entry stored in dbm for [ENSG00000273218.1]
WARNING, no entry stored in dbm for [ENSG00000274712.2]
WARNING, no entry stored in dbm for [ENSG00000243004.6]
WARNING, no entry stored in dbm for [ENSG00000286883.1]
WARNING, no entry stored in dbm for [ENSG00000214243.3]
WARNING, no entry stored in dbm for [ENSG00000205485.13]
WARNING, no entry stored in dbm for [ENSG00000241057.2]
WARNING, no entry stored in dbm for [ENSG00000239556.4]
WARNING, no entry stored in dbm for [ENSG00000241057.2]
WARNING, no entry stored in dbm for [ENSG00000239556.4]
WARNING, no entry stored in dbm for [ENSG00000277283.1]
WARNING, no entry stored in dbm for [ENSG00000250132.6]
WARNING, no entry stored in dbm for [ENSG00000274177.1]
WARNING, no entry stored in dbm for [ENSG00000239533.6]
WARNING, no entry stored in dbm for [ENSG00000274177.1]
WARNING, no entry stored in dbm for [ENSG00000231421.8]
* STAR-Fusion complete. See output: /tmp/nxf.1WGLE9vO6V/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)