AIH curated blacklist: matched 5 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 309
Pass (FILTER=PASS): 56 (18.1%)
Fail (FILTER=FAIL): 253 (81.9%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 5
All 5 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 36
confidence_below_min(medium<high);total_reads_below_min(6.0<8.0): 36
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 29
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 24
confidence_below_min(medium<high): 23
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 17
confidence_below_min(medium<high);total_reads_below_min(2.0<8.0): 12
confidence_below_min(medium<high);total_reads_below_min(7.0<8.0): 12
total_reads_below_min(6.0<8.0): 7
confidence_below_min(low<high): 7
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 7
total_reads_below_min(3.0<8.0): 6
total_reads_below_min(5.0<8.0): 6
total_reads_below_min(7.0<8.0): 6
total_reads_below_min(4.0<8.0): 6
Breakdown by confidence:
high: 56 pass, 32 fail (total: 88)
low: 0 pass, 79 fail (total: 79)
medium: 0 pass, 142 fail (total: 142)
Arriba filter: 309 rows -> 56 PASS; wrote tih_rna_sample_00161_B23WHTKLT4_2.arriba.fusions.filtered.tsv and tih_rna_sample_00161_B23WHTKLT4_2.arriba.fusions.filtered_pass_only.tsv
Summary written to: tih_rna_sample_00161_B23WHTKLT4_2.arriba.fusions.filter_summary.txt