AIH curated blacklist: matched 4 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 150
Pass (FILTER=PASS): 8 (5.3%)
Fail (FILTER=FAIL): 142 (94.7%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 4
All 4 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 23
confidence_below_min(medium<high): 22
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 16
confidence_below_min(medium<high);total_reads_below_min(6.0<8.0): 12
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 10
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 9
confidence_below_min(low<high): 9
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 7
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 6
confidence_below_min(medium<high);total_reads_below_min(2.0<8.0): 4
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 4
total_reads_below_min(3.0<8.0): 3
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 3
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 3
total_reads_below_min(5.0<8.0): 2
Breakdown by confidence:
high: 8 pass, 6 fail (total: 14)
low: 0 pass, 58 fail (total: 58)
medium: 0 pass, 78 fail (total: 78)
Arriba filter: 150 rows -> 8 PASS; wrote tih_rna_sample_00473_B23WHTKLT4_2.arriba.fusions.filtered.tsv and tih_rna_sample_00473_B23WHTKLT4_2.arriba.fusions.filtered_pass_only.tsv
Summary written to: tih_rna_sample_00473_B23WHTKLT4_2.arriba.fusions.filter_summary.txt