AIH curated blacklist: matched 5 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 119
Pass (FILTER=PASS): 11 (9.2%)
Fail (FILTER=FAIL): 108 (90.8%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 5
All 5 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 26
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 20
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 12
confidence_below_min(medium<high);total_reads_below_min(7.0<8.0): 10
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 9
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 7
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 6
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 3
confidence_below_min(medium<high);aih_curated_blacklist: 3
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 3
confidence_below_min(low<high);total_reads_below_min(5.0<8.0);aih_curated_blacklist: 2
confidence_below_min(low<high): 2
confidence_below_min(low<high);total_reads_below_min(7.0<8.0): 1
total_reads_below_min(4.0<8.0): 1
total_reads_below_min(3.0<8.0): 1
Breakdown by confidence:
high: 11 pass, 2 fail (total: 13)
low: 0 pass, 32 fail (total: 32)
medium: 0 pass, 74 fail (total: 74)
Arriba filter: 119 rows -> 11 PASS; wrote tih_rna_sample_00464_B23WHTKLT4_1.arriba.fusions.filtered.tsv and tih_rna_sample_00464_B23WHTKLT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: tih_rna_sample_00464_B23WHTKLT4_1.arriba.fusions.filter_summary.txt