AIH curated blacklist: matched 4 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 161
Pass (FILTER=PASS): 22 (13.7%)
Fail (FILTER=FAIL): 139 (86.3%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 4
All 4 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 28
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 18
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 14
confidence_below_min(medium<high);total_reads_below_min(2.0<8.0): 9
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 9
confidence_below_min(medium<high);total_reads_below_min(6.0<8.0): 9
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 9
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 5
confidence_below_min(low<high): 5
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 4
confidence_below_min(low<high);total_reads_below_min(7.0<8.0): 4
total_reads_below_min(7.0<8.0): 3
total_reads_below_min(3.0<8.0): 3
confidence_below_min(medium<high);aih_curated_blacklist: 3
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 3
Breakdown by confidence:
high: 22 pass, 10 fail (total: 32)
low: 0 pass, 48 fail (total: 48)
medium: 0 pass, 81 fail (total: 81)
Arriba filter: 161 rows -> 22 PASS; wrote 659_buD-T1-TRNA-1_B23WHTKLT4_1.arriba.fusions.filtered.tsv and 659_buD-T1-TRNA-1_B23WHTKLT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: 659_buD-T1-TRNA-1_B23WHTKLT4_1.arriba.fusions.filter_summary.txt