AIH curated blacklist: matched 7 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 146
Pass (FILTER=PASS): 23 (15.8%)
Fail (FILTER=FAIL): 123 (84.2%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 7
All 7 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 23
confidence_below_min(medium<high);total_reads_below_min(6.0<8.0): 21
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 12
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 10
confidence_below_min(medium<high): 10
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 10
confidence_below_min(medium<high);total_reads_below_min(2.0<8.0): 9
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 6
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 6
confidence_below_min(medium<high);aih_curated_blacklist: 4
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 2
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 2
confidence_below_min(low<high);total_reads_below_min(6.0<8.0): 1
confidence_below_min(low<high);total_reads_below_min(2.0<8.0);aih_curated_blacklist: 1
total_reads_below_min(5.0<8.0): 1
Breakdown by confidence:
high: 23 pass, 3 fail (total: 26)
low: 0 pass, 42 fail (total: 42)
medium: 0 pass, 78 fail (total: 78)
Arriba filter: 146 rows -> 23 PASS; wrote 659_bTo-T1-TRNA-1_B23WHTKLT4_1.arriba.fusions.filtered.tsv and 659_bTo-T1-TRNA-1_B23WHTKLT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: 659_bTo-T1-TRNA-1_B23WHTKLT4_1.arriba.fusions.filter_summary.txt