AIH curated blacklist: matched 6 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 238
Pass (FILTER=PASS): 44 (18.5%)
Fail (FILTER=FAIL): 194 (81.5%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 6
All 6 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 23
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 22
confidence_below_min(medium<high): 20
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 19
confidence_below_min(medium<high);total_reads_below_min(2.0<8.0): 14
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 14
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 11
confidence_below_min(medium<high);total_reads_below_min(7.0<8.0): 11
confidence_below_min(low<high): 9
total_reads_below_min(4.0<8.0): 8
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 8
total_reads_below_min(6.0<8.0): 6
total_reads_below_min(3.0<8.0): 6
total_reads_below_min(5.0<8.0): 3
confidence_below_min(medium<high);aih_curated_blacklist: 3
Breakdown by confidence:
high: 44 pass, 26 fail (total: 70)
low: 0 pass, 80 fail (total: 80)
medium: 0 pass, 88 fail (total: 88)
Arriba filter: 238 rows -> 44 PASS; wrote tih_rna_sample_00161_B23WHTKLT4_1.arriba.fusions.filtered.tsv and tih_rna_sample_00161_B23WHTKLT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: tih_rna_sample_00161_B23WHTKLT4_1.arriba.fusions.filter_summary.txt