File Info

Filename
.command.log
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/81/bfcabeca95eae9edf2ad01fa83fdf1/.command.log
Size
1.0 KB
Attempt
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/af/faf3e8d8e3b606673d0cad43bd49df/659_bua-T1-TRNA-1_B23WHTKLT4_1
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/81/bfcabeca95eae9edf2ad01fa83fdf1/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/81/bfcabeca95eae9edf2ad01fa83fdf1/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e4/c018597a9d3b72808360818d5a8503/659_bua-T1-TRNA-1_B23WHTKLT4_1.sample_qc.tsv
==> STAGING COMPLETE (4 inputs)

Processing Kallisto file: 659_bua-T1-TRNA-1_B23WHTKLT4_1/abundance.h5
Successfully converted 659_bua-T1-TRNA-1_B23WHTKLT4_1/abundance.h5 to 659_bua-T1-TRNA-1_B23WHTKLT4_1_kallisto_mqc.tsv
  Sample: 659_bua-T1-TRNA-1_B23WHTKLT4_1
  Mean Fragment Length: 148.0 bp
  Median Fragment Length: 137.0 bp
  pct_mito_est_counts: 0.0%
  pct_ribo_est_counts: 0.71%
  pct_hk_est_counts: 0.54%
  pct_male_est_counts: 0.0%
  pct_mito_tpm: 0.01%
  pct_ribo_tpm: 2.32%
  pct_hk_tpm: 0.81%
  pct_male_tpm: 0.0%