AIH curated blacklist: matched 2 fusion rows (breakpoint_ID in qualified set)
================================================================================
ARRIBA FILTERING SUMMARY
================================================================================
Total fusions: 272
Pass (FILTER=PASS): 51 (18.8%)
Fail (FILTER=FAIL): 221 (81.2%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 2
All 2 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 36
confidence_below_min(medium<high): 29
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 28
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 25
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 18
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 11
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 10
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 8
confidence_below_min(low<high): 7
confidence_below_min(medium<high);total_reads_below_min(2.0<8.0): 7
total_reads_below_min(5.0<8.0): 6
confidence_below_min(medium<high);total_reads_below_min(6.0<8.0): 5
total_reads_below_min(4.0<8.0): 5
total_reads_below_min(3.0<8.0): 4
confidence_below_min(medium<high);total_reads_below_min(7.0<8.0): 4
Breakdown by confidence:
high: 51 pass, 22 fail (total: 73)
low: 0 pass, 100 fail (total: 100)
medium: 0 pass, 99 fail (total: 99)
Arriba filter: 272 rows -> 51 PASS; wrote tih_rna_sample_00461_B23WHTKLT4_2.arriba.fusions.filtered.tsv and tih_rna_sample_00461_B23WHTKLT4_2.arriba.fusions.filtered_pass_only.tsv
Summary written to: tih_rna_sample_00461_B23WHTKLT4_2.arriba.fusions.filter_summary.txt