File Info

Filename
Demultiplex_Stats.csv
Full Path
s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0021/A23YTGFLT4/nfcore_rnafusion__73d51683--20260607-225254/bclconvert/L008/Reports/Demultiplex_Stats.csv
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10.8 KB
Published
Jun 07, 2026 11:47 PM
Lane SampleID Index # Reads # Perfect Index Reads # One Mismatch Index Reads # Two Mismatch Index Reads % Reads % Perfect Index Reads % One Mismatch Index Reads % Two Mismatch Index Reads
8 aih-tih-sc-d666f1-R1_A23YTGFLT4_1 TAACTTGGTC-GTCGTGAATC 33523829 32885698 638131 0 0.0085 0.9810 0.0190 0.0000
8 aih-tih-sc-3282fd-R1_A23YTGFLT4_1 ATAAGCGGAG-CTGTTCTACG 30697452 29472478 1224974 0 0.0078 0.9601 0.0399 0.0000
8 aih-tih-sc-67e6e5-R1_A23YTGFLT4_1 AGTAGTGTTG-AACACCTCTT 46474107 45605102 869005 0 0.0118 0.9813 0.0187 0.0000
8 aih-tih-sc-3377ac-R1_A23YTGFLT4_1 ATGTTGCCAC-TAGAAGCCAT 44456932 43628228 828704 0 0.0113 0.9814 0.0186 0.0000
8 aih-tih-sc-5519ab-R1_A23YTGFLT4_1 CAGCAGGTCA-CACTTAGGTA 43652481 42969999 682482 0 0.0110 0.9844 0.0156 0.0000
8 aih-tih-sc-966ec5-R1_A23YTGFLT4_1 TCTAGCTGCG-ATAGGTAAGG 43455118 42618579 836539 0 0.0110 0.9807 0.0193 0.0000
8 aih-tih-sc-776623-R1_A23YTGFLT4_1 AGATTAGCGT-CGCCTTATAT 43496357 42246817 1249540 0 0.0110 0.9713 0.0287 0.0000
8 aih-tih-sc-01eb49-R1_A23YTGFLT4_1 AGGTAACAAC-GCACGATGCT 42469306 41720436 748870 0 0.0107 0.9824 0.0176 0.0000
8 aih-tih-sc-8c7069-R1_A23YTGFLT4_1 CGCACTTCGT-AATATGCCAG 30461717 29925920 535797 0 0.0077 0.9824 0.0176 0.0000
8 aih-tih-sc-a8a787-R1_A23YTGFLT4_1 CTTGCTATTC-TAGAGTCACG 68221960 66865913 1356047 0 0.0173 0.9801 0.0199 0.0000
8 aih-tih-sc-fba77b-R1_A23YTGFLT4_1 TCTCACCAGG-TTAACAGGTC 6751060 6596331 154729 0 0.0017 0.9771 0.0229 0.0000
8 aih-tih-sc-a9fe91-R1_A23YTGFLT4_1 TTCCTCACGT-ACATGAGCCA 66045988 64876736 1169252 0 0.0167 0.9823 0.0177 0.0000
8 aih-tih-sc-9b89b4-R1_A23YTGFLT4_1 TCGAACACGA-GCGAGGTTCT 41324134 40556642 767492 0 0.0105 0.9814 0.0186 0.0000
8 aih-tih-sc-13d441-R1_A23YTGFLT4_1 TCCAACTGAA-TGTCCGTAGG 32358429 31643603 714826 0 0.0082 0.9779 0.0221 0.0000
8 aih-tih-sc-7f9674-R1_A23YTGFLT4_1 GAACCGCATT-CATTATGCCT 50031355 49134814 896541 0 0.0127 0.9821 0.0179 0.0000
8 aih-tih-sc-da06ce-R1_A23YTGFLT4_1 ACAACAGGCT-TCCACTGTTG 48149264 47342900 806364 0 0.0122 0.9833 0.0167 0.0000
8 aih-tih-sc-ecc0bc-R1_A23YTGFLT4_1 TTACGCGCAT-CTTAACGACA 30783773 30252868 530905 0 0.0078 0.9828 0.0172 0.0000
8 aih-tih-sc-6c4b48-R1_A23YTGFLT4_1 TTCTCTTAGC-TCCTCGAGCT 58191280 57178451 1012829 0 0.0147 0.9826 0.0174 0.0000
8 aih-tih-sc-31d31f-R1_A23YTGFLT4_1 TCGCGACACT-CGAGTAATGT 24487093 24032385 454708 0 0.0062 0.9814 0.0186 0.0000
8 aih-tih-sc-816ec7-R1_A23YTGFLT4_1 TGGAGATCGA-CAGCGGTATG 47330162 45901084 1429078 0 0.0120 0.9698 0.0302 0.0000
8 aih-tih-sc-fe8311-R1_A23YTGFLT4_1 CCAGACCGAT-GCTACTTGCA 49605007 48546744 1058263 0 0.0126 0.9787 0.0213 0.0000
8 aih-tih-sc-f834a3-R1_A23YTGFLT4_1 CCACAGCCTT-GCTATTGAAG 29710724 29117988 592736 0 0.0075 0.9800 0.0200 0.0000
8 aih-tih-sc-0754d2-R1_A23YTGFLT4_1 ACCGAATAGA-TCAGCATCCG 3793053 3709247 83806 0 0.0010 0.9779 0.0221 0.0000
8 aih-tih-sc-a51633-R1_A23YTGFLT4_1 CGGACGATTC-TAGGTGGTGG 64029039 62965306 1063733 0 0.0162 0.9834 0.0166 0.0000
8 aih-tih-sc-64fc89-R1_A23YTGFLT4_1 TTACTTCGTG-AAGATCGGAT 43621790 42853765 768025 0 0.0110 0.9824 0.0176 0.0000
8 aih-tih-sc-ffabe0-R1_A23YTGFLT4_1 ATTCGGCTTA-TTAACGTCCG 38422209 37771302 650907 0 0.0097 0.9831 0.0169 0.0000
8 aih-tih-sc-242a7d-R1_A23YTGFLT4_1 CGCGGTATCT-ATTACCGATC 31991784 31461149 530635 0 0.0081 0.9834 0.0166 0.0000
8 aih-tih-sc-f0dbdf-R1_A23YTGFLT4_1 TATCCGCGTC-GTTGCATCGT 44997050 44103550 893500 0 0.0114 0.9801 0.0199 0.0000
8 aih-tih-sc-6d9e6f-R1_A23YTGFLT4_1 AGGATGTCCA-ACTGGACGTT 43380500 42534962 845538 0 0.0110 0.9805 0.0195 0.0000
8 aih-tih-sc-318819-R1_A23YTGFLT4_1 GCCAGCTATC-TTGTTCGTGT 32377783 31764566 613217 0 0.0082 0.9811 0.0189 0.0000
8 aih-tih-sc-e08fa3-R1_A23YTGFLT4_1 CTTACGAACT-ACGGACTGAG 51658640 50689254 969386 0 0.0131 0.9812 0.0188 0.0000
8 NTC_0001_0001_A23YTGFLT4_1 CAAGACTCAA-CACCGTCATA 11474 11231 243 0 0.0000 0.9788 0.0212 0.0000
8 aih-tih-sc-b8457f-R1_A23YTGFLT4_1 TCGACGGCAA-GTAGTTGTGT 52260608 51323449 937159 0 0.0132 0.9821 0.0179 0.0000
8 aih-tih-sc-6cc13c-R1_A23YTGFLT4_1 TCAGTTCGAT-CTGAGTCCTT 51074149 50147710 926439 0 0.0129 0.9819 0.0181 0.0000
8 aih-tih-sc-2b9bfa-R1_A23YTGFLT4_1 CTAACCTCAA-TCACAGTTGC 43597719 42705814 891905 0 0.0110 0.9795 0.0205 0.0000
8 aih-tih-sc-c400f1-R1_A23YTGFLT4_1 GACCTACTAT-ATTGTAAGCG 46885528 46015482 870046 0 0.0119 0.9814 0.0186 0.0000
8 aih-tih-sc-2e5fe9-R1_A23YTGFLT4_1 ACGAGACGTC-CGGTCTCTCT 52126061 51104151 1021910 0 0.0132 0.9804 0.0196 0.0000
8 aih-tih-sc-fa55c3-R1_A23YTGFLT4_1 TATGGCAAGC-AACAGCAATG 37715254 37004012 711242 0 0.0095 0.9811 0.0189 0.0000
8 aih-tih-sc-598a93-R1_A23YTGFLT4_1 ACTCCGAAGC-TCCGTGTTGC 7741069 7601922 139147 0 0.0020 0.9820 0.0180 0.0000
8 aih-tih-sc-538ae3-R1_A23YTGFLT4_1 AATCTGCAGT-TGCGAAGTGA 51386596 50569801 816795 0 0.0130 0.9841 0.0159 0.0000
8 aih-tih-sc-b6a2e8-R1_A23YTGFLT4_1 AGTTCAGGCG-CACAGCTATT 54142443 53126444 1015999 0 0.0137 0.9812 0.0188 0.0000
8 aih-tih-sc-45523c-R1_A23YTGFLT4_1 CGCCAAGGTA-GATAGTGTTC 30626296 30025573 600723 0 0.0078 0.9804 0.0196 0.0000
8 aih-tih-sc-d5fda9-R1_A23YTGFLT4_1 CCTGACATCT-TAGCTACCAG 3683501 3583309 100192 0 0.0009 0.9728 0.0272 0.0000
8 aih-tih-sc-184b05-R1_A23YTGFLT4_1 CGAGCGTAGT-TGCTCACGCA 64549184 63464421 1084763 0 0.0163 0.9832 0.0168 0.0000
8 aih-tih-sc-e1cae1-R1_A23YTGFLT4_1 CTGGATTACT-AAGTGTGCTA 22286665 21943415 343250 0 0.0056 0.9846 0.0154 0.0000
8 aih-tih-sc-8e3550-R1_A23YTGFLT4_1 AGCAATTCAC-TCATCGTCTG 19680889 19335494 345395 0 0.0050 0.9825 0.0175 0.0000
8 aih-tih-sc-f2fa3a-R1_A23YTGFLT4_1 ATATTCTCGG-AGATGCTCCG 40063835 39223844 839991 0 0.0101 0.9790 0.0210 0.0000
8 aih-tih-sc-24ecfe-R1_A23YTGFLT4_1 GACTCATCCA-GAACCAAGCG 4276072 4181878 94194 0 0.0011 0.9780 0.0220 0.0000
8 aih-tih-sc-5ceb9a-R1_A23YTGFLT4_1 CATAAGCGAC-CCTCTTCAAG 36012344 35280337 732007 0 0.0091 0.9797 0.0203 0.0000
8 aih-tih-sc-c493d4-R1_A23YTGFLT4_1 CCTAAGCTGA-CGTCGCATCT 30447442 29802736 644706 0 0.0077 0.9788 0.0212 0.0000
8 aih-tih-sc-89f3a3-R1_A23YTGFLT4_1 CGATGTCTTG-CCGAACGTTC 55617351 54607241 1010110 0 0.0141 0.9818 0.0182 0.0000
8 aih-tih-sc-3b436b-R1_A23YTGFLT4_1 GAGATGAGAG-GAATGGCGTT 16509475 16066006 443469 0 0.0042 0.9731 0.0269 0.0000
8 aih-tih-sc-92d360-R1_A23YTGFLT4_1 TCACCATAAG-AAGTTCAGGA 30527208 29948136 579072 0 0.0077 0.9810 0.0190 0.0000
8 aih-tih-sc-28eb14-R1_A23YTGFLT4_1 ACTTCCGGCA-GACCAATTGT 48214943 47428593 786350 0 0.0122 0.9837 0.0163 0.0000
8 aih-tih-sc-ffd2af-R1_A23YTGFLT4_1 AAGCGCTTAG-TGTCTGTGAC 27670230 27017904 652326 0 0.0070 0.9764 0.0236 0.0000
8 aih-tih-sc-790e56-R1_A23YTGFLT4_1 AACAACACAG-GAACATTGGC 21410397 20981760 428637 0 0.0054 0.9800 0.0200 0.0000
8 aih-tih-sc-d1f1a3-R1_A23YTGFLT4_1 AGACTAGATG-CGTAACACTA 45477026 44530036 946990 0 0.0115 0.9792 0.0208 0.0000
8 aih-tih-sc-a558c6-R1_A23YTGFLT4_1 CCTCTATAGA-GTACTTCCAA 18721087 18279617 441470 0 0.0047 0.9764 0.0236 0.0000
8 aih-tih-sc-b6fd19-R1_A23YTGFLT4_1 TACGCTACTT-TTAGCGTCTT 52519551 51515397 1004154 0 0.0133 0.9809 0.0191 0.0000
8 aih-tih-sc-885658-R1_A23YTGFLT4_1 CGCACTGGTA-TTGACCGTCT 34460688 33885972 574716 0 0.0087 0.9833 0.0167 0.0000
8 aih-tih-sc-49909d-R1_A23YTGFLT4_1 AACTCTCTAC-ACGGCTTCTC 33835594 33027218 808376 0 0.0086 0.9761 0.0239 0.0000
8 aih-tih-sc-96d0f6-R1_A23YTGFLT4_1 GCCACCTAGT-TGCGATGTAT 44115602 43053565 1062037 0 0.0112 0.9759 0.0241 0.0000
8 aih-tih-sc-7fa0fb-R1_A23YTGFLT4_1 CTCCGCCATA-GCGTTCAGCA 23669724 23211011 458713 0 0.0060 0.9806 0.0194 0.0000
8 FFPE_V4_0002_RNA_0002_A23YTGFLT4_1 TGACACGATT-GCCTAGGAAG 36401259 35674160 727099 0 0.0092 0.9800 0.0200 0.0000
8 aih-tih-sc-64cd51-R1_A23YTGFLT4_1 CAACTGCGCA-AGTGTATCCG 39424165 38507759 916406 0 0.0100 0.9768 0.0232 0.0000
8 aih-tih-sc-cece97-R1_A23YTGFLT4_1 GCAATCTGCT-ACGAACCAAG 43765687 42900918 864769 0 0.0111 0.9802 0.0198 0.0000
8 aih-tih-sc-c35cc3-R1_A23YTGFLT4_1 CTCTATTGAG-CACGCAAGTC 31601727 30496960 1104767 0 0.0080 0.9650 0.0350 0.0000
8 aih-tih-sc-f6bb6f-R1_A23YTGFLT4_1 CACTTACGGC-GCTGGAGAAG 38191760 37448464 743296 0 0.0097 0.9805 0.0195 0.0000
8 aih-tih-sc-f27606-R1_A23YTGFLT4_1 TCAGCATCTA-CCAGTGTACG 37070512 36362226 708286 0 0.0094 0.9809 0.0191 0.0000
8 aih-tih-sc-3abdf4-R1_A23YTGFLT4_1 GTTGCATCAA-GTTGATGCGA 30370763 29841315 529448 0 0.0077 0.9826 0.0174 0.0000
8 aih-tih-sc-1274d4-R1_A23YTGFLT4_1 ATGACAGCAC-CGCTTGTTAT 32700567 31932554 768013 0 0.0083 0.9765 0.0235 0.0000
8 aih-tih-sc-573e21-R1_A23YTGFLT4_1 TAGCGACGGA-GTAACGTTCA 40593217 39650778 942439 0 0.0103 0.9768 0.0232 0.0000
8 aih-tih-sc-69be7e-R1_A23YTGFLT4_1 GTATGCCACA-CCGAGTCTTC 38927957 38204237 723720 0 0.0099 0.9814 0.0186 0.0000
8 aih-tih-sc-56cab8-R1_A23YTGFLT4_1 AGTATCCGAT-TATTGCGCTA 44618120 43401793 1216327 0 0.0113 0.9727 0.0273 0.0000
8 aih-tih-sc-a97ce1-R1_A23YTGFLT4_1 AACGAAGATC-TGTGGTCTAA 27370811 26780026 590785 0 0.0069 0.9784 0.0216 0.0000
8 aih-tih-sc-d963a2-R1_A23YTGFLT4_1 CCTCCTGTGA-CACGTCTACG 51097514 49763098 1334416 0 0.0129 0.9739 0.0261 0.0000
8 aih-tih-sc-f8efb2-R1_A23YTGFLT4_1 TAGGCGAATG-AGTCCAGTGA 42294343 41529728 764615 0 0.0107 0.9819 0.0181 0.0000
8 aih-tih-sc-656590-R1_A23YTGFLT4_1 AGTAAGGAGA-ATGCTTGGTC 33905622 33301875 603747 0 0.0086 0.9822 0.0178 0.0000
8 aih-tih-sc-9703f5-R1_A23YTGFLT4_1 CCGAACAGAG-TGATACTCGC 21353704 20773376 580328 0 0.0054 0.9728 0.0272 0.0000
8 aih-tih-sc-150e73-R1_A23YTGFLT4_1 AGAACTAACG-TTATCGAGAG 48206910 47306562 900348 0 0.0122 0.9813 0.0187 0.0000
8 aih-tih-sc-eecf9f-R1_A23YTGFLT4_1 GAGCAGCTTG-TGCCAGTATT 71892069 70162601 1729468 0 0.0182 0.9759 0.0241 0.0000
8 aih-tih-sc-714733-R1_A23YTGFLT4_1 CCGATAGTAG-GAGTTGCATA 43171318 41902814 1268504 0 0.0109 0.9706 0.0294 0.0000
8 aih-tih-sc-5b8b4a-R1_A23YTGFLT4_1 GTGTCTACAG-ACACTAGCAT 42878930 42110918 768012 0 0.0109 0.9821 0.0179 0.0000
8 aih-tih-sc-3270ab-R1_A23YTGFLT4_1 GTACAGACCG-GTTCTAATGG 56645270 55483035 1162235 0 0.0143 0.9795 0.0205 0.0000
8 aih-tih-sc-9e2647-R1_A23YTGFLT4_1 GCCAACAGAC-CGTTCACGTT 41266898 40454535 812363 0 0.0104 0.9803 0.0197 0.0000
8 aih-tih-sc-992d78-R1_A23YTGFLT4_1 CCTCGTTGGA-GACTGCGTTA 34077507 33318398 759109 0 0.0086 0.9777 0.0223 0.0000
8 aih-tih-sc-f7ac14-R1_A23YTGFLT4_1 AATAGGTAGG-TGGCTTATGG 36955069 36312089 642980 0 0.0094 0.9826 0.0174 0.0000
8 aih-tih-sc-377071-R1_A23YTGFLT4_1 TATGCGTAGC-TCAGAGGCAC 41090867 40362087 728780 0 0.0104 0.9823 0.0177 0.0000
8 aih-tih-sc-4bcd26-R1_A23YTGFLT4_1 CCAGTCGTCA-CGCTAGGCTA 24372943 23905567 467376 0 0.0062 0.9808 0.0192 0.0000
8 aih-tih-sc-f26674-R1_A23YTGFLT4_1 AGAAGACCTA-AACCGTAACA 53199682 51862848 1336834 0 0.0135 0.9749 0.0251 0.0000
8 aih-tih-sc-ec2fd6-R1_A23YTGFLT4_1 CCGTGAGTTC-CTTGGTATGA 35697532 35031454 666078 0 0.0090 0.9813 0.0187 0.0000
8 aih-tih-sc-01c779-R1_A23YTGFLT4_1 TCAATTCCGA-TGTAGATCCG 34020239 33462601 557638 0 0.0086 0.9836 0.0164 0.0000
8 aih-tih-sc-bbc28d-R1_A23YTGFLT4_1 CGGAACACAA-AACTCTACCG 26208413 25606208 602205 0 0.0066 0.9770 0.0230 0.0000
8 aih-tih-sc-607ec3-R1_A23YTGFLT4_1 CTATAACGGA-CGTGACATTC 23347038 22870752 476286 0 0.0059 0.9796 0.0204 0.0000
8 aih-tih-sc-b567d0-R1_A23YTGFLT4_1 AGATGTAAGG-CTGTACCAGG 28912070 28406958 505112 0 0.0073 0.9825 0.0175 0.0000
8 FFPE_HD789_01_RNA_13_A23YTGFLT4_1 ATGCTTACTG-ACTGGTTCCG 57288621 56221661 1066960 0 0.0145 0.9814 0.0186 0.0000
8 Undetermined 295033479 295033479 0 0 0.0747 1.0000 0.0000 0.0000
98 rows