File Info

Filename
Demultiplex_Stats.csv
Full Path
s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0021/A23YTGFLT4/nfcore_rnafusion__73d51683--20260607-225254/bclconvert/L003/Reports/Demultiplex_Stats.csv
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10.8 KB
Published
Jun 07, 2026 11:54 PM
Lane SampleID Index # Reads # Perfect Index Reads # One Mismatch Index Reads # Two Mismatch Index Reads % Reads % Perfect Index Reads % One Mismatch Index Reads % Two Mismatch Index Reads
3 aih-tih-sc-d666f1-R1_A23YTGFLT4_1 TAACTTGGTC-GTCGTGAATC 33705781 33145352 560429 0 0.0084 0.9834 0.0166 0.0000
3 aih-tih-sc-3282fd-R1_A23YTGFLT4_1 ATAAGCGGAG-CTGTTCTACG 31041946 29885257 1156689 0 0.0078 0.9627 0.0373 0.0000
3 aih-tih-sc-67e6e5-R1_A23YTGFLT4_1 AGTAGTGTTG-AACACCTCTT 47259544 46420650 838894 0 0.0118 0.9822 0.0178 0.0000
3 aih-tih-sc-3377ac-R1_A23YTGFLT4_1 ATGTTGCCAC-TAGAAGCCAT 44747175 44008183 738992 0 0.0112 0.9835 0.0165 0.0000
3 aih-tih-sc-5519ab-R1_A23YTGFLT4_1 CAGCAGGTCA-CACTTAGGTA 44290107 43702416 587691 0 0.0111 0.9867 0.0133 0.0000
3 aih-tih-sc-966ec5-R1_A23YTGFLT4_1 TCTAGCTGCG-ATAGGTAAGG 44195050 43452812 742238 0 0.0111 0.9832 0.0168 0.0000
3 aih-tih-sc-776623-R1_A23YTGFLT4_1 AGATTAGCGT-CGCCTTATAT 44178275 43046960 1131315 0 0.0111 0.9744 0.0256 0.0000
3 aih-tih-sc-01eb49-R1_A23YTGFLT4_1 AGGTAACAAC-GCACGATGCT 42784353 42129908 654445 0 0.0107 0.9847 0.0153 0.0000
3 aih-tih-sc-8c7069-R1_A23YTGFLT4_1 CGCACTTCGT-AATATGCCAG 30551646 30081803 469843 0 0.0077 0.9846 0.0154 0.0000
3 aih-tih-sc-a8a787-R1_A23YTGFLT4_1 CTTGCTATTC-TAGAGTCACG 68802061 67589637 1212424 0 0.0172 0.9824 0.0176 0.0000
3 aih-tih-sc-fba77b-R1_A23YTGFLT4_1 TCTCACCAGG-TTAACAGGTC 6787957 6646277 141680 0 0.0017 0.9791 0.0209 0.0000
3 aih-tih-sc-a9fe91-R1_A23YTGFLT4_1 TTCCTCACGT-ACATGAGCCA 66208494 65166754 1041740 0 0.0166 0.9843 0.0157 0.0000
3 aih-tih-sc-9b89b4-R1_A23YTGFLT4_1 TCGAACACGA-GCGAGGTTCT 41537755 40868910 668845 0 0.0104 0.9839 0.0161 0.0000
3 aih-tih-sc-13d441-R1_A23YTGFLT4_1 TCCAACTGAA-TGTCCGTAGG 32964401 32322228 642173 0 0.0083 0.9805 0.0195 0.0000
3 aih-tih-sc-7f9674-R1_A23YTGFLT4_1 GAACCGCATT-CATTATGCCT 50408079 49613293 794786 0 0.0126 0.9842 0.0158 0.0000
3 aih-tih-sc-da06ce-R1_A23YTGFLT4_1 ACAACAGGCT-TCCACTGTTG 48508918 47799039 709879 0 0.0122 0.9854 0.0146 0.0000
3 aih-tih-sc-ecc0bc-R1_A23YTGFLT4_1 TTACGCGCAT-CTTAACGACA 30708351 30248022 460329 0 0.0077 0.9850 0.0150 0.0000
3 aih-tih-sc-6c4b48-R1_A23YTGFLT4_1 TTCTCTTAGC-TCCTCGAGCT 58658509 57738200 920309 0 0.0147 0.9843 0.0157 0.0000
3 aih-tih-sc-31d31f-R1_A23YTGFLT4_1 TCGCGACACT-CGAGTAATGT 24633922 24230047 403875 0 0.0062 0.9836 0.0164 0.0000
3 aih-tih-sc-816ec7-R1_A23YTGFLT4_1 TGGAGATCGA-CAGCGGTATG 48121527 46821206 1300321 0 0.0121 0.9730 0.0270 0.0000
3 aih-tih-sc-fe8311-R1_A23YTGFLT4_1 CCAGACCGAT-GCTACTTGCA 49900132 48956581 943551 0 0.0125 0.9811 0.0189 0.0000
3 aih-tih-sc-f834a3-R1_A23YTGFLT4_1 CCACAGCCTT-GCTATTGAAG 29797925 29269713 528212 0 0.0075 0.9823 0.0177 0.0000
3 aih-tih-sc-0754d2-R1_A23YTGFLT4_1 ACCGAATAGA-TCAGCATCCG 3842611 3767422 75189 0 0.0010 0.9804 0.0196 0.0000
3 aih-tih-sc-a51633-R1_A23YTGFLT4_1 CGGACGATTC-TAGGTGGTGG 65224463 64284640 939823 0 0.0163 0.9856 0.0144 0.0000
3 aih-tih-sc-64fc89-R1_A23YTGFLT4_1 TTACTTCGTG-AAGATCGGAT 43821178 43143098 678080 0 0.0110 0.9845 0.0155 0.0000
3 aih-tih-sc-ffabe0-R1_A23YTGFLT4_1 ATTCGGCTTA-TTAACGTCCG 38659620 38089564 570056 0 0.0097 0.9853 0.0147 0.0000
3 aih-tih-sc-242a7d-R1_A23YTGFLT4_1 CGCGGTATCT-ATTACCGATC 32131984 31669321 462663 0 0.0080 0.9856 0.0144 0.0000
3 aih-tih-sc-f0dbdf-R1_A23YTGFLT4_1 TATCCGCGTC-GTTGCATCGT 45931526 45143068 788458 0 0.0115 0.9828 0.0172 0.0000
3 aih-tih-sc-6d9e6f-R1_A23YTGFLT4_1 AGGATGTCCA-ACTGGACGTT 43597393 42859599 737794 0 0.0109 0.9831 0.0169 0.0000
3 aih-tih-sc-318819-R1_A23YTGFLT4_1 GCCAGCTATC-TTGTTCGTGT 32456733 31914902 541831 0 0.0081 0.9833 0.0167 0.0000
3 aih-tih-sc-e08fa3-R1_A23YTGFLT4_1 CTTACGAACT-ACGGACTGAG 51531068 50686361 844707 0 0.0129 0.9836 0.0164 0.0000
3 NTC_0001_0001_A23YTGFLT4_1 CAAGACTCAA-CACCGTCATA 11258 11036 222 0 0.0000 0.9803 0.0197 0.0000
3 aih-tih-sc-b8457f-R1_A23YTGFLT4_1 TCGACGGCAA-GTAGTTGTGT 53729321 52886370 842951 0 0.0135 0.9843 0.0157 0.0000
3 aih-tih-sc-6cc13c-R1_A23YTGFLT4_1 TCAGTTCGAT-CTGAGTCCTT 51370341 50549231 821110 0 0.0129 0.9840 0.0160 0.0000
3 aih-tih-sc-2b9bfa-R1_A23YTGFLT4_1 CTAACCTCAA-TCACAGTTGC 44077733 43284302 793431 0 0.0110 0.9820 0.0180 0.0000
3 aih-tih-sc-c400f1-R1_A23YTGFLT4_1 GACCTACTAT-ATTGTAAGCG 47405831 46629825 776006 0 0.0119 0.9836 0.0164 0.0000
3 aih-tih-sc-2e5fe9-R1_A23YTGFLT4_1 ACGAGACGTC-CGGTCTCTCT 52249614 51352947 896667 0 0.0131 0.9828 0.0172 0.0000
3 aih-tih-sc-fa55c3-R1_A23YTGFLT4_1 TATGGCAAGC-AACAGCAATG 38103520 37479832 623688 0 0.0095 0.9836 0.0164 0.0000
3 aih-tih-sc-598a93-R1_A23YTGFLT4_1 ACTCCGAAGC-TCCGTGTTGC 7783489 7660983 122506 0 0.0019 0.9843 0.0157 0.0000
3 aih-tih-sc-538ae3-R1_A23YTGFLT4_1 AATCTGCAGT-TGCGAAGTGA 51561142 50850447 710695 0 0.0129 0.9862 0.0138 0.0000
3 aih-tih-sc-b6a2e8-R1_A23YTGFLT4_1 AGTTCAGGCG-CACAGCTATT 55119471 54210017 909454 0 0.0138 0.9835 0.0165 0.0000
3 aih-tih-sc-45523c-R1_A23YTGFLT4_1 CGCCAAGGTA-GATAGTGTTC 30762365 30229837 532528 0 0.0077 0.9827 0.0173 0.0000
3 aih-tih-sc-d5fda9-R1_A23YTGFLT4_1 CCTGACATCT-TAGCTACCAG 3683041 3586641 96400 0 0.0009 0.9738 0.0262 0.0000
3 aih-tih-sc-184b05-R1_A23YTGFLT4_1 CGAGCGTAGT-TGCTCACGCA 64888818 63940764 948054 0 0.0163 0.9854 0.0146 0.0000
3 aih-tih-sc-e1cae1-R1_A23YTGFLT4_1 CTGGATTACT-AAGTGTGCTA 22342651 22047363 295288 0 0.0056 0.9868 0.0132 0.0000
3 aih-tih-sc-8e3550-R1_A23YTGFLT4_1 AGCAATTCAC-TCATCGTCTG 19843102 19538562 304540 0 0.0050 0.9847 0.0153 0.0000
3 aih-tih-sc-f2fa3a-R1_A23YTGFLT4_1 ATATTCTCGG-AGATGCTCCG 40213454 39447516 765938 0 0.0101 0.9810 0.0190 0.0000
3 aih-tih-sc-24ecfe-R1_A23YTGFLT4_1 GACTCATCCA-GAACCAAGCG 4290373 4206752 83621 0 0.0011 0.9805 0.0195 0.0000
3 aih-tih-sc-5ceb9a-R1_A23YTGFLT4_1 CATAAGCGAC-CCTCTTCAAG 36469056 35819260 649796 0 0.0091 0.9822 0.0178 0.0000
3 aih-tih-sc-c493d4-R1_A23YTGFLT4_1 CCTAAGCTGA-CGTCGCATCT 30747483 30178066 569417 0 0.0077 0.9815 0.0185 0.0000
3 aih-tih-sc-89f3a3-R1_A23YTGFLT4_1 CGATGTCTTG-CCGAACGTTC 56346077 55445053 901024 0 0.0141 0.9840 0.0160 0.0000
3 aih-tih-sc-3b436b-R1_A23YTGFLT4_1 GAGATGAGAG-GAATGGCGTT 16351658 15947589 404069 0 0.0041 0.9753 0.0247 0.0000
3 aih-tih-sc-92d360-R1_A23YTGFLT4_1 TCACCATAAG-AAGTTCAGGA 30946176 30433678 512498 0 0.0078 0.9834 0.0166 0.0000
3 aih-tih-sc-28eb14-R1_A23YTGFLT4_1 ACTTCCGGCA-GACCAATTGT 48996642 48312010 684632 0 0.0123 0.9860 0.0140 0.0000
3 aih-tih-sc-ffd2af-R1_A23YTGFLT4_1 AAGCGCTTAG-TGTCTGTGAC 27998737 27408533 590204 0 0.0070 0.9789 0.0211 0.0000
3 aih-tih-sc-790e56-R1_A23YTGFLT4_1 AACAACACAG-GAACATTGGC 21672233 21292582 379651 0 0.0054 0.9825 0.0175 0.0000
3 aih-tih-sc-d1f1a3-R1_A23YTGFLT4_1 AGACTAGATG-CGTAACACTA 45884293 45040065 844228 0 0.0115 0.9816 0.0184 0.0000
3 aih-tih-sc-a558c6-R1_A23YTGFLT4_1 CCTCTATAGA-GTACTTCCAA 18857274 18466950 390324 0 0.0047 0.9793 0.0207 0.0000
3 aih-tih-sc-b6fd19-R1_A23YTGFLT4_1 TACGCTACTT-TTAGCGTCTT 52651296 51758055 893241 0 0.0132 0.9830 0.0170 0.0000
3 aih-tih-sc-885658-R1_A23YTGFLT4_1 CGCACTGGTA-TTGACCGTCT 34499644 33997140 502504 0 0.0086 0.9854 0.0146 0.0000
3 aih-tih-sc-49909d-R1_A23YTGFLT4_1 AACTCTCTAC-ACGGCTTCTC 33928268 33182420 745848 0 0.0085 0.9780 0.0220 0.0000
3 aih-tih-sc-96d0f6-R1_A23YTGFLT4_1 GCCACCTAGT-TGCGATGTAT 44382625 43416863 965762 0 0.0111 0.9782 0.0218 0.0000
3 aih-tih-sc-7fa0fb-R1_A23YTGFLT4_1 CTCCGCCATA-GCGTTCAGCA 23759355 23351710 407645 0 0.0060 0.9828 0.0172 0.0000
3 FFPE_V4_0002_RNA_0002_A23YTGFLT4_1 TGACACGATT-GCCTAGGAAG 36616496 35973738 642758 0 0.0092 0.9824 0.0176 0.0000
3 aih-tih-sc-64cd51-R1_A23YTGFLT4_1 CAACTGCGCA-AGTGTATCCG 40124649 39321592 803057 0 0.0101 0.9800 0.0200 0.0000
3 aih-tih-sc-cece97-R1_A23YTGFLT4_1 GCAATCTGCT-ACGAACCAAG 43968985 43202088 766897 0 0.0110 0.9826 0.0174 0.0000
3 aih-tih-sc-c35cc3-R1_A23YTGFLT4_1 CTCTATTGAG-CACGCAAGTC 31967196 30942605 1024591 0 0.0080 0.9679 0.0321 0.0000
3 aih-tih-sc-f6bb6f-R1_A23YTGFLT4_1 CACTTACGGC-GCTGGAGAAG 38950349 38283210 667139 0 0.0098 0.9829 0.0171 0.0000
3 aih-tih-sc-f27606-R1_A23YTGFLT4_1 TCAGCATCTA-CCAGTGTACG 37328922 36699872 629050 0 0.0094 0.9831 0.0169 0.0000
3 aih-tih-sc-3abdf4-R1_A23YTGFLT4_1 GTTGCATCAA-GTTGATGCGA 30669650 30202523 467127 0 0.0077 0.9848 0.0152 0.0000
3 aih-tih-sc-1274d4-R1_A23YTGFLT4_1 ATGACAGCAC-CGCTTGTTAT 33333655 32644145 689510 0 0.0084 0.9793 0.0207 0.0000
3 aih-tih-sc-573e21-R1_A23YTGFLT4_1 TAGCGACGGA-GTAACGTTCA 41078294 40231470 846824 0 0.0103 0.9794 0.0206 0.0000
3 aih-tih-sc-69be7e-R1_A23YTGFLT4_1 GTATGCCACA-CCGAGTCTTC 39136918 38492278 644640 0 0.0098 0.9835 0.0165 0.0000
3 aih-tih-sc-56cab8-R1_A23YTGFLT4_1 AGTATCCGAT-TATTGCGCTA 45003727 43951669 1052058 0 0.0113 0.9766 0.0234 0.0000
3 aih-tih-sc-a97ce1-R1_A23YTGFLT4_1 AACGAAGATC-TGTGGTCTAA 27613464 27085952 527512 0 0.0069 0.9809 0.0191 0.0000
3 aih-tih-sc-d963a2-R1_A23YTGFLT4_1 CCTCCTGTGA-CACGTCTACG 51721648 50484438 1237210 0 0.0130 0.9761 0.0239 0.0000
3 aih-tih-sc-f8efb2-R1_A23YTGFLT4_1 TAGGCGAATG-AGTCCAGTGA 42879076 42204499 674577 0 0.0107 0.9843 0.0157 0.0000
3 aih-tih-sc-656590-R1_A23YTGFLT4_1 AGTAAGGAGA-ATGCTTGGTC 34229361 33712381 516980 0 0.0086 0.9849 0.0151 0.0000
3 aih-tih-sc-9703f5-R1_A23YTGFLT4_1 CCGAACAGAG-TGATACTCGC 21414247 20896816 517431 0 0.0054 0.9758 0.0242 0.0000
3 aih-tih-sc-150e73-R1_A23YTGFLT4_1 AGAACTAACG-TTATCGAGAG 48908132 48116219 791913 0 0.0123 0.9838 0.0162 0.0000
3 aih-tih-sc-eecf9f-R1_A23YTGFLT4_1 GAGCAGCTTG-TGCCAGTATT 73039773 71486718 1553055 0 0.0183 0.9787 0.0213 0.0000
3 aih-tih-sc-714733-R1_A23YTGFLT4_1 CCGATAGTAG-GAGTTGCATA 43818864 42681005 1137859 0 0.0110 0.9740 0.0260 0.0000
3 aih-tih-sc-5b8b4a-R1_A23YTGFLT4_1 GTGTCTACAG-ACACTAGCAT 43500386 42817376 683010 0 0.0109 0.9843 0.0157 0.0000
3 aih-tih-sc-3270ab-R1_A23YTGFLT4_1 GTACAGACCG-GTTCTAATGG 57304837 56262868 1041969 0 0.0144 0.9818 0.0182 0.0000
3 aih-tih-sc-9e2647-R1_A23YTGFLT4_1 GCCAACAGAC-CGTTCACGTT 41693751 40963442 730309 0 0.0104 0.9825 0.0175 0.0000
3 aih-tih-sc-992d78-R1_A23YTGFLT4_1 CCTCGTTGGA-GACTGCGTTA 34372282 33699423 672859 0 0.0086 0.9804 0.0196 0.0000
3 aih-tih-sc-f7ac14-R1_A23YTGFLT4_1 AATAGGTAGG-TGGCTTATGG 37038850 36481573 557277 0 0.0093 0.9850 0.0150 0.0000
3 aih-tih-sc-377071-R1_A23YTGFLT4_1 TATGCGTAGC-TCAGAGGCAC 41578845 40935677 643168 0 0.0104 0.9845 0.0155 0.0000
3 aih-tih-sc-4bcd26-R1_A23YTGFLT4_1 CCAGTCGTCA-CGCTAGGCTA 24795604 24381952 413652 0 0.0062 0.9833 0.0167 0.0000
3 aih-tih-sc-f26674-R1_A23YTGFLT4_1 AGAAGACCTA-AACCGTAACA 53621074 52420735 1200339 0 0.0134 0.9776 0.0224 0.0000
3 aih-tih-sc-ec2fd6-R1_A23YTGFLT4_1 CCGTGAGTTC-CTTGGTATGA 35854121 35271504 582617 0 0.0090 0.9838 0.0162 0.0000
3 aih-tih-sc-01c779-R1_A23YTGFLT4_1 TCAATTCCGA-TGTAGATCCG 34575543 34079917 495626 0 0.0087 0.9857 0.0143 0.0000
3 aih-tih-sc-bbc28d-R1_A23YTGFLT4_1 CGGAACACAA-AACTCTACCG 26500801 25952980 547821 0 0.0066 0.9793 0.0207 0.0000
3 aih-tih-sc-607ec3-R1_A23YTGFLT4_1 CTATAACGGA-CGTGACATTC 23488506 23065909 422597 0 0.0059 0.9820 0.0180 0.0000
3 aih-tih-sc-b567d0-R1_A23YTGFLT4_1 AGATGTAAGG-CTGTACCAGG 29500346 29052748 447598 0 0.0074 0.9848 0.0152 0.0000
3 FFPE_HD789_01_RNA_13_A23YTGFLT4_1 ATGCTTACTG-ACTGGTTCCG 58012824 57084610 928214 0 0.0145 0.9840 0.0160 0.0000
3 Undetermined 300084169 300084169 0 0 0.0752 1.0000 0.0000 0.0000
98 rows