Lane,SampleID,Index,# Reads,# Perfect Index Reads,# One Mismatch Index Reads,# Two Mismatch Index Reads,% Reads,% Perfect Index Reads,% One Mismatch Index Reads,% Two Mismatch Index Reads 3,aih-tih-sc-d666f1-R1_A23YTGFLT4_1,TAACTTGGTC-GTCGTGAATC,33705781,33145352,560429,0,0.0084,0.9834,0.0166,0.0000 3,aih-tih-sc-3282fd-R1_A23YTGFLT4_1,ATAAGCGGAG-CTGTTCTACG,31041946,29885257,1156689,0,0.0078,0.9627,0.0373,0.0000 3,aih-tih-sc-67e6e5-R1_A23YTGFLT4_1,AGTAGTGTTG-AACACCTCTT,47259544,46420650,838894,0,0.0118,0.9822,0.0178,0.0000 3,aih-tih-sc-3377ac-R1_A23YTGFLT4_1,ATGTTGCCAC-TAGAAGCCAT,44747175,44008183,738992,0,0.0112,0.9835,0.0165,0.0000 3,aih-tih-sc-5519ab-R1_A23YTGFLT4_1,CAGCAGGTCA-CACTTAGGTA,44290107,43702416,587691,0,0.0111,0.9867,0.0133,0.0000 3,aih-tih-sc-966ec5-R1_A23YTGFLT4_1,TCTAGCTGCG-ATAGGTAAGG,44195050,43452812,742238,0,0.0111,0.9832,0.0168,0.0000 3,aih-tih-sc-776623-R1_A23YTGFLT4_1,AGATTAGCGT-CGCCTTATAT,44178275,43046960,1131315,0,0.0111,0.9744,0.0256,0.0000 3,aih-tih-sc-01eb49-R1_A23YTGFLT4_1,AGGTAACAAC-GCACGATGCT,42784353,42129908,654445,0,0.0107,0.9847,0.0153,0.0000 3,aih-tih-sc-8c7069-R1_A23YTGFLT4_1,CGCACTTCGT-AATATGCCAG,30551646,30081803,469843,0,0.0077,0.9846,0.0154,0.0000 3,aih-tih-sc-a8a787-R1_A23YTGFLT4_1,CTTGCTATTC-TAGAGTCACG,68802061,67589637,1212424,0,0.0172,0.9824,0.0176,0.0000 3,aih-tih-sc-fba77b-R1_A23YTGFLT4_1,TCTCACCAGG-TTAACAGGTC,6787957,6646277,141680,0,0.0017,0.9791,0.0209,0.0000 3,aih-tih-sc-a9fe91-R1_A23YTGFLT4_1,TTCCTCACGT-ACATGAGCCA,66208494,65166754,1041740,0,0.0166,0.9843,0.0157,0.0000 3,aih-tih-sc-9b89b4-R1_A23YTGFLT4_1,TCGAACACGA-GCGAGGTTCT,41537755,40868910,668845,0,0.0104,0.9839,0.0161,0.0000 3,aih-tih-sc-13d441-R1_A23YTGFLT4_1,TCCAACTGAA-TGTCCGTAGG,32964401,32322228,642173,0,0.0083,0.9805,0.0195,0.0000 3,aih-tih-sc-7f9674-R1_A23YTGFLT4_1,GAACCGCATT-CATTATGCCT,50408079,49613293,794786,0,0.0126,0.9842,0.0158,0.0000 3,aih-tih-sc-da06ce-R1_A23YTGFLT4_1,ACAACAGGCT-TCCACTGTTG,48508918,47799039,709879,0,0.0122,0.9854,0.0146,0.0000 3,aih-tih-sc-ecc0bc-R1_A23YTGFLT4_1,TTACGCGCAT-CTTAACGACA,30708351,30248022,460329,0,0.0077,0.9850,0.0150,0.0000 3,aih-tih-sc-6c4b48-R1_A23YTGFLT4_1,TTCTCTTAGC-TCCTCGAGCT,58658509,57738200,920309,0,0.0147,0.9843,0.0157,0.0000 3,aih-tih-sc-31d31f-R1_A23YTGFLT4_1,TCGCGACACT-CGAGTAATGT,24633922,24230047,403875,0,0.0062,0.9836,0.0164,0.0000 3,aih-tih-sc-816ec7-R1_A23YTGFLT4_1,TGGAGATCGA-CAGCGGTATG,48121527,46821206,1300321,0,0.0121,0.9730,0.0270,0.0000 3,aih-tih-sc-fe8311-R1_A23YTGFLT4_1,CCAGACCGAT-GCTACTTGCA,49900132,48956581,943551,0,0.0125,0.9811,0.0189,0.0000 3,aih-tih-sc-f834a3-R1_A23YTGFLT4_1,CCACAGCCTT-GCTATTGAAG,29797925,29269713,528212,0,0.0075,0.9823,0.0177,0.0000 3,aih-tih-sc-0754d2-R1_A23YTGFLT4_1,ACCGAATAGA-TCAGCATCCG,3842611,3767422,75189,0,0.0010,0.9804,0.0196,0.0000 3,aih-tih-sc-a51633-R1_A23YTGFLT4_1,CGGACGATTC-TAGGTGGTGG,65224463,64284640,939823,0,0.0163,0.9856,0.0144,0.0000 3,aih-tih-sc-64fc89-R1_A23YTGFLT4_1,TTACTTCGTG-AAGATCGGAT,43821178,43143098,678080,0,0.0110,0.9845,0.0155,0.0000 3,aih-tih-sc-ffabe0-R1_A23YTGFLT4_1,ATTCGGCTTA-TTAACGTCCG,38659620,38089564,570056,0,0.0097,0.9853,0.0147,0.0000 3,aih-tih-sc-242a7d-R1_A23YTGFLT4_1,CGCGGTATCT-ATTACCGATC,32131984,31669321,462663,0,0.0080,0.9856,0.0144,0.0000 3,aih-tih-sc-f0dbdf-R1_A23YTGFLT4_1,TATCCGCGTC-GTTGCATCGT,45931526,45143068,788458,0,0.0115,0.9828,0.0172,0.0000 3,aih-tih-sc-6d9e6f-R1_A23YTGFLT4_1,AGGATGTCCA-ACTGGACGTT,43597393,42859599,737794,0,0.0109,0.9831,0.0169,0.0000 3,aih-tih-sc-318819-R1_A23YTGFLT4_1,GCCAGCTATC-TTGTTCGTGT,32456733,31914902,541831,0,0.0081,0.9833,0.0167,0.0000 3,aih-tih-sc-e08fa3-R1_A23YTGFLT4_1,CTTACGAACT-ACGGACTGAG,51531068,50686361,844707,0,0.0129,0.9836,0.0164,0.0000 3,NTC_0001_0001_A23YTGFLT4_1,CAAGACTCAA-CACCGTCATA,11258,11036,222,0,0.0000,0.9803,0.0197,0.0000 3,aih-tih-sc-b8457f-R1_A23YTGFLT4_1,TCGACGGCAA-GTAGTTGTGT,53729321,52886370,842951,0,0.0135,0.9843,0.0157,0.0000 3,aih-tih-sc-6cc13c-R1_A23YTGFLT4_1,TCAGTTCGAT-CTGAGTCCTT,51370341,50549231,821110,0,0.0129,0.9840,0.0160,0.0000 3,aih-tih-sc-2b9bfa-R1_A23YTGFLT4_1,CTAACCTCAA-TCACAGTTGC,44077733,43284302,793431,0,0.0110,0.9820,0.0180,0.0000 3,aih-tih-sc-c400f1-R1_A23YTGFLT4_1,GACCTACTAT-ATTGTAAGCG,47405831,46629825,776006,0,0.0119,0.9836,0.0164,0.0000 3,aih-tih-sc-2e5fe9-R1_A23YTGFLT4_1,ACGAGACGTC-CGGTCTCTCT,52249614,51352947,896667,0,0.0131,0.9828,0.0172,0.0000 3,aih-tih-sc-fa55c3-R1_A23YTGFLT4_1,TATGGCAAGC-AACAGCAATG,38103520,37479832,623688,0,0.0095,0.9836,0.0164,0.0000 3,aih-tih-sc-598a93-R1_A23YTGFLT4_1,ACTCCGAAGC-TCCGTGTTGC,7783489,7660983,122506,0,0.0019,0.9843,0.0157,0.0000 3,aih-tih-sc-538ae3-R1_A23YTGFLT4_1,AATCTGCAGT-TGCGAAGTGA,51561142,50850447,710695,0,0.0129,0.9862,0.0138,0.0000 3,aih-tih-sc-b6a2e8-R1_A23YTGFLT4_1,AGTTCAGGCG-CACAGCTATT,55119471,54210017,909454,0,0.0138,0.9835,0.0165,0.0000 3,aih-tih-sc-45523c-R1_A23YTGFLT4_1,CGCCAAGGTA-GATAGTGTTC,30762365,30229837,532528,0,0.0077,0.9827,0.0173,0.0000 3,aih-tih-sc-d5fda9-R1_A23YTGFLT4_1,CCTGACATCT-TAGCTACCAG,3683041,3586641,96400,0,0.0009,0.9738,0.0262,0.0000 3,aih-tih-sc-184b05-R1_A23YTGFLT4_1,CGAGCGTAGT-TGCTCACGCA,64888818,63940764,948054,0,0.0163,0.9854,0.0146,0.0000 3,aih-tih-sc-e1cae1-R1_A23YTGFLT4_1,CTGGATTACT-AAGTGTGCTA,22342651,22047363,295288,0,0.0056,0.9868,0.0132,0.0000 3,aih-tih-sc-8e3550-R1_A23YTGFLT4_1,AGCAATTCAC-TCATCGTCTG,19843102,19538562,304540,0,0.0050,0.9847,0.0153,0.0000 3,aih-tih-sc-f2fa3a-R1_A23YTGFLT4_1,ATATTCTCGG-AGATGCTCCG,40213454,39447516,765938,0,0.0101,0.9810,0.0190,0.0000 3,aih-tih-sc-24ecfe-R1_A23YTGFLT4_1,GACTCATCCA-GAACCAAGCG,4290373,4206752,83621,0,0.0011,0.9805,0.0195,0.0000 3,aih-tih-sc-5ceb9a-R1_A23YTGFLT4_1,CATAAGCGAC-CCTCTTCAAG,36469056,35819260,649796,0,0.0091,0.9822,0.0178,0.0000 3,aih-tih-sc-c493d4-R1_A23YTGFLT4_1,CCTAAGCTGA-CGTCGCATCT,30747483,30178066,569417,0,0.0077,0.9815,0.0185,0.0000 3,aih-tih-sc-89f3a3-R1_A23YTGFLT4_1,CGATGTCTTG-CCGAACGTTC,56346077,55445053,901024,0,0.0141,0.9840,0.0160,0.0000 3,aih-tih-sc-3b436b-R1_A23YTGFLT4_1,GAGATGAGAG-GAATGGCGTT,16351658,15947589,404069,0,0.0041,0.9753,0.0247,0.0000 3,aih-tih-sc-92d360-R1_A23YTGFLT4_1,TCACCATAAG-AAGTTCAGGA,30946176,30433678,512498,0,0.0078,0.9834,0.0166,0.0000 3,aih-tih-sc-28eb14-R1_A23YTGFLT4_1,ACTTCCGGCA-GACCAATTGT,48996642,48312010,684632,0,0.0123,0.9860,0.0140,0.0000 3,aih-tih-sc-ffd2af-R1_A23YTGFLT4_1,AAGCGCTTAG-TGTCTGTGAC,27998737,27408533,590204,0,0.0070,0.9789,0.0211,0.0000 3,aih-tih-sc-790e56-R1_A23YTGFLT4_1,AACAACACAG-GAACATTGGC,21672233,21292582,379651,0,0.0054,0.9825,0.0175,0.0000 3,aih-tih-sc-d1f1a3-R1_A23YTGFLT4_1,AGACTAGATG-CGTAACACTA,45884293,45040065,844228,0,0.0115,0.9816,0.0184,0.0000 3,aih-tih-sc-a558c6-R1_A23YTGFLT4_1,CCTCTATAGA-GTACTTCCAA,18857274,18466950,390324,0,0.0047,0.9793,0.0207,0.0000 3,aih-tih-sc-b6fd19-R1_A23YTGFLT4_1,TACGCTACTT-TTAGCGTCTT,52651296,51758055,893241,0,0.0132,0.9830,0.0170,0.0000 3,aih-tih-sc-885658-R1_A23YTGFLT4_1,CGCACTGGTA-TTGACCGTCT,34499644,33997140,502504,0,0.0086,0.9854,0.0146,0.0000 3,aih-tih-sc-49909d-R1_A23YTGFLT4_1,AACTCTCTAC-ACGGCTTCTC,33928268,33182420,745848,0,0.0085,0.9780,0.0220,0.0000 3,aih-tih-sc-96d0f6-R1_A23YTGFLT4_1,GCCACCTAGT-TGCGATGTAT,44382625,43416863,965762,0,0.0111,0.9782,0.0218,0.0000 3,aih-tih-sc-7fa0fb-R1_A23YTGFLT4_1,CTCCGCCATA-GCGTTCAGCA,23759355,23351710,407645,0,0.0060,0.9828,0.0172,0.0000 3,FFPE_V4_0002_RNA_0002_A23YTGFLT4_1,TGACACGATT-GCCTAGGAAG,36616496,35973738,642758,0,0.0092,0.9824,0.0176,0.0000 3,aih-tih-sc-64cd51-R1_A23YTGFLT4_1,CAACTGCGCA-AGTGTATCCG,40124649,39321592,803057,0,0.0101,0.9800,0.0200,0.0000 3,aih-tih-sc-cece97-R1_A23YTGFLT4_1,GCAATCTGCT-ACGAACCAAG,43968985,43202088,766897,0,0.0110,0.9826,0.0174,0.0000 3,aih-tih-sc-c35cc3-R1_A23YTGFLT4_1,CTCTATTGAG-CACGCAAGTC,31967196,30942605,1024591,0,0.0080,0.9679,0.0321,0.0000 3,aih-tih-sc-f6bb6f-R1_A23YTGFLT4_1,CACTTACGGC-GCTGGAGAAG,38950349,38283210,667139,0,0.0098,0.9829,0.0171,0.0000 3,aih-tih-sc-f27606-R1_A23YTGFLT4_1,TCAGCATCTA-CCAGTGTACG,37328922,36699872,629050,0,0.0094,0.9831,0.0169,0.0000 3,aih-tih-sc-3abdf4-R1_A23YTGFLT4_1,GTTGCATCAA-GTTGATGCGA,30669650,30202523,467127,0,0.0077,0.9848,0.0152,0.0000 3,aih-tih-sc-1274d4-R1_A23YTGFLT4_1,ATGACAGCAC-CGCTTGTTAT,33333655,32644145,689510,0,0.0084,0.9793,0.0207,0.0000 3,aih-tih-sc-573e21-R1_A23YTGFLT4_1,TAGCGACGGA-GTAACGTTCA,41078294,40231470,846824,0,0.0103,0.9794,0.0206,0.0000 3,aih-tih-sc-69be7e-R1_A23YTGFLT4_1,GTATGCCACA-CCGAGTCTTC,39136918,38492278,644640,0,0.0098,0.9835,0.0165,0.0000 3,aih-tih-sc-56cab8-R1_A23YTGFLT4_1,AGTATCCGAT-TATTGCGCTA,45003727,43951669,1052058,0,0.0113,0.9766,0.0234,0.0000 3,aih-tih-sc-a97ce1-R1_A23YTGFLT4_1,AACGAAGATC-TGTGGTCTAA,27613464,27085952,527512,0,0.0069,0.9809,0.0191,0.0000 3,aih-tih-sc-d963a2-R1_A23YTGFLT4_1,CCTCCTGTGA-CACGTCTACG,51721648,50484438,1237210,0,0.0130,0.9761,0.0239,0.0000 3,aih-tih-sc-f8efb2-R1_A23YTGFLT4_1,TAGGCGAATG-AGTCCAGTGA,42879076,42204499,674577,0,0.0107,0.9843,0.0157,0.0000 3,aih-tih-sc-656590-R1_A23YTGFLT4_1,AGTAAGGAGA-ATGCTTGGTC,34229361,33712381,516980,0,0.0086,0.9849,0.0151,0.0000 3,aih-tih-sc-9703f5-R1_A23YTGFLT4_1,CCGAACAGAG-TGATACTCGC,21414247,20896816,517431,0,0.0054,0.9758,0.0242,0.0000 3,aih-tih-sc-150e73-R1_A23YTGFLT4_1,AGAACTAACG-TTATCGAGAG,48908132,48116219,791913,0,0.0123,0.9838,0.0162,0.0000 3,aih-tih-sc-eecf9f-R1_A23YTGFLT4_1,GAGCAGCTTG-TGCCAGTATT,73039773,71486718,1553055,0,0.0183,0.9787,0.0213,0.0000 3,aih-tih-sc-714733-R1_A23YTGFLT4_1,CCGATAGTAG-GAGTTGCATA,43818864,42681005,1137859,0,0.0110,0.9740,0.0260,0.0000 3,aih-tih-sc-5b8b4a-R1_A23YTGFLT4_1,GTGTCTACAG-ACACTAGCAT,43500386,42817376,683010,0,0.0109,0.9843,0.0157,0.0000 3,aih-tih-sc-3270ab-R1_A23YTGFLT4_1,GTACAGACCG-GTTCTAATGG,57304837,56262868,1041969,0,0.0144,0.9818,0.0182,0.0000 3,aih-tih-sc-9e2647-R1_A23YTGFLT4_1,GCCAACAGAC-CGTTCACGTT,41693751,40963442,730309,0,0.0104,0.9825,0.0175,0.0000 3,aih-tih-sc-992d78-R1_A23YTGFLT4_1,CCTCGTTGGA-GACTGCGTTA,34372282,33699423,672859,0,0.0086,0.9804,0.0196,0.0000 3,aih-tih-sc-f7ac14-R1_A23YTGFLT4_1,AATAGGTAGG-TGGCTTATGG,37038850,36481573,557277,0,0.0093,0.9850,0.0150,0.0000 3,aih-tih-sc-377071-R1_A23YTGFLT4_1,TATGCGTAGC-TCAGAGGCAC,41578845,40935677,643168,0,0.0104,0.9845,0.0155,0.0000 3,aih-tih-sc-4bcd26-R1_A23YTGFLT4_1,CCAGTCGTCA-CGCTAGGCTA,24795604,24381952,413652,0,0.0062,0.9833,0.0167,0.0000 3,aih-tih-sc-f26674-R1_A23YTGFLT4_1,AGAAGACCTA-AACCGTAACA,53621074,52420735,1200339,0,0.0134,0.9776,0.0224,0.0000 3,aih-tih-sc-ec2fd6-R1_A23YTGFLT4_1,CCGTGAGTTC-CTTGGTATGA,35854121,35271504,582617,0,0.0090,0.9838,0.0162,0.0000 3,aih-tih-sc-01c779-R1_A23YTGFLT4_1,TCAATTCCGA-TGTAGATCCG,34575543,34079917,495626,0,0.0087,0.9857,0.0143,0.0000 3,aih-tih-sc-bbc28d-R1_A23YTGFLT4_1,CGGAACACAA-AACTCTACCG,26500801,25952980,547821,0,0.0066,0.9793,0.0207,0.0000 3,aih-tih-sc-607ec3-R1_A23YTGFLT4_1,CTATAACGGA-CGTGACATTC,23488506,23065909,422597,0,0.0059,0.9820,0.0180,0.0000 3,aih-tih-sc-b567d0-R1_A23YTGFLT4_1,AGATGTAAGG-CTGTACCAGG,29500346,29052748,447598,0,0.0074,0.9848,0.0152,0.0000 3,FFPE_HD789_01_RNA_13_A23YTGFLT4_1,ATGCTTACTG-ACTGGTTCCG,58012824,57084610,928214,0,0.0145,0.9840,0.0160,0.0000 3,Undetermined,,300084169,300084169,0,0,0.0752,1.0000,0.0000,0.0000