File Info

Filename
Demultiplex_Stats_aggregate.csv
Full Path
s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0021/A23YTGFLT4/nfcore_rnafusion__73d51683--20260607-225254/bclconvert/reports/Demultiplex_Stats_aggregate.csv
Size
12.4 KB
Published
Jun 08, 2026 12:08 AM
SampleID Lanes Index # Reads # Perfect Index Reads # One Mismatch Index Reads # Two Mismatch Index Reads % Reads % Perfect Index Reads % One Mismatch Index Reads % Two Mismatch Index Reads
FFPE_HD789_01_RNA_13_A23YTGFLT4_1 1,2,3,4,5,6,7,8 ATGCTTACTG-ACTGGTTCCG 458076204 450189041 7887163 0 0.0145 0.9828 0.0172 0.0
FFPE_V4_0002_RNA_0002_A23YTGFLT4_1 1,2,3,4,5,6,7,8 TGACACGATT-GCCTAGGAAG 290128329 284675246 5453083 0 0.0092 0.9812 0.0188 0.0
NTC_0001_0001_A23YTGFLT4_1 1,2,3,4,5,6,7,8 CAAGACTCAA-CACCGTCATA 91113 89314 1799 0 0.0 0.9803 0.0197 0.0
Undetermined 1,2,3,4,5,6,7,8 2398585782 2398585782 0 0 0.0758 1.0 0.0 0.0
aih-tih-sc-01c779-R1_A23YTGFLT4_1 1,2,3,4,5,6,7,8 TCAATTCCGA-TGTAGATCCG 274170710 269966208 4204502 0 0.0087 0.9847 0.0153 0.0
aih-tih-sc-01eb49-R1_A23YTGFLT4_1 1,2,3,4,5,6,7,8 AGGTAACAAC-GCACGATGCT 338423035 332865748 5557287 0 0.0107 0.9836 0.0164 0.0
aih-tih-sc-0754d2-R1_A23YTGFLT4_1 1,2,3,4,5,6,7,8 ACCGAATAGA-TCAGCATCCG 30429186 29790113 639073 0 0.001 0.979 0.021 0.0
aih-tih-sc-1274d4-R1_A23YTGFLT4_1 1,2,3,4,5,6,7,8 ATGACAGCAC-CGCTTGTTAT 264048496 258209615 5838881 0 0.0083 0.9779 0.0221 0.0
aih-tih-sc-13d441-R1_A23YTGFLT4_1 1,2,3,4,5,6,7,8 TCCAACTGAA-TGTCCGTAGG 260390570 254931590 5458980 0 0.0082 0.979 0.021 0.0
aih-tih-sc-150e73-R1_A23YTGFLT4_1 1,2,3,4,5,6,7,8 AGAACTAACG-TTATCGAGAG 386484599 379744999 6739600 0 0.0122 0.9826 0.0174 0.0
aih-tih-sc-184b05-R1_A23YTGFLT4_1 1,2,3,4,5,6,7,8 CGAGCGTAGT-TGCTCACGCA 515062313 506969638 8092675 0 0.0163 0.9843 0.0157 0.0
aih-tih-sc-242a7d-R1_A23YTGFLT4_1 1,2,3,4,5,6,7,8 CGCGGTATCT-ATTACCGATC 255272088 251300450 3971638 0 0.0081 0.9844 0.0156 0.0
aih-tih-sc-24ecfe-R1_A23YTGFLT4_1 1,2,3,4,5,6,7,8 GACTCATCCA-GAACCAAGCG 34070927 33363483 707444 0 0.0011 0.9792 0.0208 0.0
aih-tih-sc-28eb14-R1_A23YTGFLT4_1 1,2,3,4,5,6,7,8 ACTTCCGGCA-GACCAATTGT 386042554 380216110 5826444 0 0.0122 0.9849 0.0151 0.0
aih-tih-sc-2b9bfa-R1_A23YTGFLT4_1 1,2,3,4,5,6,7,8 CTAACCTCAA-TCACAGTTGC 348124980 341378363 6746617 0 0.011 0.9806 0.0194 0.0
aih-tih-sc-2e5fe9-R1_A23YTGFLT4_1 1,2,3,4,5,6,7,8 ACGAGACGTC-CGGTCTCTCT 414358416 406731844 7626572 0 0.0131 0.9816 0.0184 0.0
aih-tih-sc-318819-R1_A23YTGFLT4_1 1,2,3,4,5,6,7,8 GCCAGCTATC-TTGTTCGTGT 257880009 253256411 4623598 0 0.0082 0.9821 0.0179 0.0
aih-tih-sc-31d31f-R1_A23YTGFLT4_1 1,2,3,4,5,6,7,8 TCGCGACACT-CGAGTAATGT 195659080 192211714 3447366 0 0.0062 0.9824 0.0176 0.0
aih-tih-sc-3270ab-R1_A23YTGFLT4_1 1,2,3,4,5,6,7,8 GTACAGACCG-GTTCTAATGG 452809190 444048279 8760911 0 0.0143 0.9807 0.0193 0.0
aih-tih-sc-3282fd-R1_A23YTGFLT4_1 1,2,3,4,5,6,7,8 ATAAGCGGAG-CTGTTCTACG 246123499 236474420 9649079 0 0.0078 0.9608 0.0392 0.0
aih-tih-sc-3377ac-R1_A23YTGFLT4_1 1,2,3,4,5,6,7,8 ATGTTGCCAC-TAGAAGCCAT 355150504 348826428 6324076 0 0.0112 0.9822 0.0178 0.0
aih-tih-sc-377071-R1_A23YTGFLT4_1 1,2,3,4,5,6,7,8 TATGCGTAGC-TCAGAGGCAC 328776315 323303591 5472724 0 0.0104 0.9834 0.0166 0.0
aih-tih-sc-3abdf4-R1_A23YTGFLT4_1 1,2,3,4,5,6,7,8 GTTGCATCAA-GTTGATGCGA 242640128 238677463 3962665 0 0.0077 0.9837 0.0163 0.0
aih-tih-sc-3b436b-R1_A23YTGFLT4_1 1,2,3,4,5,6,7,8 GAGATGAGAG-GAATGGCGTT 130184139 126788210 3395929 0 0.0041 0.9739 0.0261 0.0
aih-tih-sc-45523c-R1_A23YTGFLT4_1 1,2,3,4,5,6,7,8 CGCCAAGGTA-GATAGTGTTC 243720785 239185379 4535406 0 0.0077 0.9814 0.0186 0.0
aih-tih-sc-49909d-R1_A23YTGFLT4_1 1,2,3,4,5,6,7,8 AACTCTCTAC-ACGGCTTCTC 268831957 262555245 6276712 0 0.0085 0.9767 0.0233 0.0
aih-tih-sc-4bcd26-R1_A23YTGFLT4_1 1,2,3,4,5,6,7,8 CCAGTCGTCA-CGCTAGGCTA 196693752 193167351 3526401 0 0.0062 0.9821 0.0179 0.0
aih-tih-sc-538ae3-R1_A23YTGFLT4_1 1,2,3,4,5,6,7,8 AATCTGCAGT-TGCGAAGTGA 409803262 403719151 6084111 0 0.013 0.9852 0.0148 0.0
aih-tih-sc-5519ab-R1_A23YTGFLT4_1 1,2,3,4,5,6,7,8 CAGCAGGTCA-CACTTAGGTA 350495069 345438176 5056893 0 0.0111 0.9856 0.0144 0.0
aih-tih-sc-56cab8-R1_A23YTGFLT4_1 1,2,3,4,5,6,7,8 AGTATCCGAT-TATTGCGCTA 356700620 347595468 9105152 0 0.0113 0.9745 0.0255 0.0
aih-tih-sc-573e21-R1_A23YTGFLT4_1 1,2,3,4,5,6,7,8 TAGCGACGGA-GTAACGTTCA 324676425 317512919 7163506 0 0.0103 0.9779 0.0221 0.0
aih-tih-sc-598a93-R1_A23YTGFLT4_1 1,2,3,4,5,6,7,8 ACTCCGAAGC-TCCGTGTTGC 61714805 60672462 1042343 0 0.002 0.9831 0.0169 0.0
aih-tih-sc-5b8b4a-R1_A23YTGFLT4_1 1,2,3,4,5,6,7,8 GTGTCTACAG-ACACTAGCAT 344540082 338731595 5808487 0 0.0109 0.9831 0.0169 0.0
aih-tih-sc-5ceb9a-R1_A23YTGFLT4_1 1,2,3,4,5,6,7,8 CATAAGCGAC-CCTCTTCAAG 288049684 282517820 5531864 0 0.0091 0.9808 0.0192 0.0
aih-tih-sc-607ec3-R1_A23YTGFLT4_1 1,2,3,4,5,6,7,8 CTATAACGGA-CGTGACATTC 186338622 182741470 3597152 0 0.0059 0.9807 0.0193 0.0
aih-tih-sc-64cd51-R1_A23YTGFLT4_1 1,2,3,4,5,6,7,8 CAACTGCGCA-AGTGTATCCG 316791961 309955415 6836546 0 0.01 0.9784 0.0216 0.0
aih-tih-sc-64fc89-R1_A23YTGFLT4_1 1,2,3,4,5,6,7,8 TTACTTCGTG-AAGATCGGAT 347326471 341574828 5751643 0 0.011 0.9834 0.0166 0.0
aih-tih-sc-656590-R1_A23YTGFLT4_1 1,2,3,4,5,6,7,8 AGTAAGGAGA-ATGCTTGGTC 270745916 266334191 4411725 0 0.0086 0.9837 0.0163 0.0
aih-tih-sc-67e6e5-R1_A23YTGFLT4_1 1,2,3,4,5,6,7,8 AGTAGTGTTG-AACACCTCTT 373991136 367237510 6753626 0 0.0118 0.9819 0.0181 0.0
aih-tih-sc-69be7e-R1_A23YTGFLT4_1 1,2,3,4,5,6,7,8 GTATGCCACA-CCGAGTCTTC 309834151 304328290 5505861 0 0.0098 0.9822 0.0178 0.0
aih-tih-sc-6c4b48-R1_A23YTGFLT4_1 1,2,3,4,5,6,7,8 TTCTCTTAGC-TCCTCGAGCT 463894115 456106179 7787936 0 0.0147 0.9832 0.0168 0.0
aih-tih-sc-6cc13c-R1_A23YTGFLT4_1 1,2,3,4,5,6,7,8 TCAGTTCGAT-CTGAGTCCTT 407102797 400092450 7010347 0 0.0129 0.9828 0.0172 0.0
aih-tih-sc-6d9e6f-R1_A23YTGFLT4_1 1,2,3,4,5,6,7,8 AGGATGTCCA-ACTGGACGTT 345491767 339214723 6277044 0 0.0109 0.9818 0.0182 0.0
aih-tih-sc-714733-R1_A23YTGFLT4_1 1,2,3,4,5,6,7,8 CCGATAGTAG-GAGTTGCATA 347229439 337594828 9634611 0 0.011 0.9723 0.0277 0.0
aih-tih-sc-776623-R1_A23YTGFLT4_1 1,2,3,4,5,6,7,8 AGATTAGCGT-CGCCTTATAT 350849616 341283680 9565936 0 0.0111 0.9727 0.0273 0.0
aih-tih-sc-790e56-R1_A23YTGFLT4_1 1,2,3,4,5,6,7,8 AACAACACAG-GAACATTGGC 171715678 168499235 3216443 0 0.0054 0.9813 0.0187 0.0
aih-tih-sc-7f9674-R1_A23YTGFLT4_1 1,2,3,4,5,6,7,8 GAACCGCATT-CATTATGCCT 399785742 393033359 6752383 0 0.0126 0.9831 0.0169 0.0
aih-tih-sc-7fa0fb-R1_A23YTGFLT4_1 1,2,3,4,5,6,7,8 CTCCGCCATA-GCGTTCAGCA 188899914 185437255 3462659 0 0.006 0.9817 0.0183 0.0
aih-tih-sc-816ec7-R1_A23YTGFLT4_1 1,2,3,4,5,6,7,8 TGGAGATCGA-CAGCGGTATG 379746523 368803235 10943288 0 0.012 0.9712 0.0288 0.0
aih-tih-sc-885658-R1_A23YTGFLT4_1 1,2,3,4,5,6,7,8 CGCACTGGTA-TTGACCGTCT 273698950 269419852 4279098 0 0.0087 0.9844 0.0156 0.0
aih-tih-sc-89f3a3-R1_A23YTGFLT4_1 1,2,3,4,5,6,7,8 CGATGTCTTG-CCGAACGTTC 445381407 437752038 7629369 0 0.0141 0.9829 0.0171 0.0
aih-tih-sc-8c7069-R1_A23YTGFLT4_1 1,2,3,4,5,6,7,8 CGCACTTCGT-AATATGCCAG 242833193 238818548 4014645 0 0.0077 0.9835 0.0165 0.0
aih-tih-sc-8e3550-R1_A23YTGFLT4_1 1,2,3,4,5,6,7,8 AGCAATTCAC-TCATCGTCTG 156991583 154396859 2594724 0 0.005 0.9835 0.0165 0.0
aih-tih-sc-92d360-R1_A23YTGFLT4_1 1,2,3,4,5,6,7,8 TCACCATAAG-AAGTTCAGGA 245131346 240758803 4372543 0 0.0077 0.9822 0.0178 0.0
aih-tih-sc-966ec5-R1_A23YTGFLT4_1 1,2,3,4,5,6,7,8 TCTAGCTGCG-ATAGGTAAGG 349161385 342852564 6308821 0 0.011 0.9819 0.0181 0.0
aih-tih-sc-96d0f6-R1_A23YTGFLT4_1 1,2,3,4,5,6,7,8 GCCACCTAGT-TGCGATGTAT 353135022 344915599 8219423 0 0.0112 0.9767 0.0233 0.0
aih-tih-sc-9703f5-R1_A23YTGFLT4_1 1,2,3,4,5,6,7,8 CCGAACAGAG-TGATACTCGC 170368386 165942685 4425701 0 0.0054 0.974 0.026 0.0
aih-tih-sc-992d78-R1_A23YTGFLT4_1 1,2,3,4,5,6,7,8 CCTCGTTGGA-GACTGCGTTA 272237069 266518970 5718099 0 0.0086 0.979 0.021 0.0
aih-tih-sc-9b89b4-R1_A23YTGFLT4_1 1,2,3,4,5,6,7,8 TCGAACACGA-GCGAGGTTCT 328919940 323235840 5684100 0 0.0104 0.9827 0.0173 0.0
aih-tih-sc-9e2647-R1_A23YTGFLT4_1 1,2,3,4,5,6,7,8 GCCAACAGAC-CGTTCACGTT 330259038 324093078 6165960 0 0.0104 0.9813 0.0187 0.0
aih-tih-sc-a51633-R1_A23YTGFLT4_1 1,2,3,4,5,6,7,8 CGGACGATTC-TAGGTGGTGG 514898137 506940906 7957231 0 0.0163 0.9845 0.0155 0.0
aih-tih-sc-a558c6-R1_A23YTGFLT4_1 1,2,3,4,5,6,7,8 CCTCTATAGA-GTACTTCCAA 149616053 146280244 3335809 0 0.0047 0.9777 0.0223 0.0
aih-tih-sc-a8a787-R1_A23YTGFLT4_1 1,2,3,4,5,6,7,8 CTTGCTATTC-TAGAGTCACG 544323379 534061562 10261817 0 0.0172 0.9811 0.0189 0.0
aih-tih-sc-a97ce1-R1_A23YTGFLT4_1 1,2,3,4,5,6,7,8 AACGAAGATC-TGTGGTCTAA 219225266 214747970 4477296 0 0.0069 0.9796 0.0204 0.0
aih-tih-sc-a9fe91-R1_A23YTGFLT4_1 1,2,3,4,5,6,7,8 TTCCTCACGT-ACATGAGCCA 525423182 516541716 8881466 0 0.0166 0.9831 0.0169 0.0
aih-tih-sc-b567d0-R1_A23YTGFLT4_1 1,2,3,4,5,6,7,8 AGATGTAAGG-CTGTACCAGG 232958529 229157534 3800995 0 0.0074 0.9837 0.0163 0.0
aih-tih-sc-b6a2e8-R1_A23YTGFLT4_1 1,2,3,4,5,6,7,8 AGTTCAGGCG-CACAGCTATT 435043506 427374433 7669073 0 0.0137 0.9824 0.0176 0.0
aih-tih-sc-b6fd19-R1_A23YTGFLT4_1 1,2,3,4,5,6,7,8 TACGCTACTT-TTAGCGTCTT 417269473 409731816 7537657 0 0.0132 0.9819 0.0181 0.0
aih-tih-sc-b8457f-R1_A23YTGFLT4_1 1,2,3,4,5,6,7,8 TCGACGGCAA-GTAGTTGTGT 421399546 414329277 7070269 0 0.0133 0.9832 0.0168 0.0
aih-tih-sc-bbc28d-R1_A23YTGFLT4_1 1,2,3,4,5,6,7,8 CGGAACACAA-AACTCTACCG 209629253 205024756 4604497 0 0.0066 0.978 0.022 0.0
aih-tih-sc-c35cc3-R1_A23YTGFLT4_1 1,2,3,4,5,6,7,8 CTCTATTGAG-CACGCAAGTC 253316999 244731142 8585857 0 0.008 0.9661 0.0339 0.0
aih-tih-sc-c400f1-R1_A23YTGFLT4_1 1,2,3,4,5,6,7,8 GACCTACTAT-ATTGTAAGCG 375300071 368729860 6570211 0 0.0119 0.9825 0.0175 0.0
aih-tih-sc-c493d4-R1_A23YTGFLT4_1 1,2,3,4,5,6,7,8 CCTAAGCTGA-CGTCGCATCT 244118574 239281775 4836799 0 0.0077 0.9802 0.0198 0.0
aih-tih-sc-cece97-R1_A23YTGFLT4_1 1,2,3,4,5,6,7,8 GCAATCTGCT-ACGAACCAAG 349033322 342513264 6520058 0 0.011 0.9813 0.0187 0.0
aih-tih-sc-d1f1a3-R1_A23YTGFLT4_1 1,2,3,4,5,6,7,8 AGACTAGATG-CGTAACACTA 364170807 356998006 7172801 0 0.0115 0.9803 0.0197 0.0
aih-tih-sc-d5fda9-R1_A23YTGFLT4_1 1,2,3,4,5,6,7,8 CCTGACATCT-TAGCTACCAG 29323962 28518008 805954 0 0.0009 0.9725 0.0275 0.0
aih-tih-sc-d666f1-R1_A23YTGFLT4_1 1,2,3,4,5,6,7,8 TAACTTGGTC-GTCGTGAATC 267931025 263144199 4786826 0 0.0085 0.9821 0.0179 0.0
aih-tih-sc-d963a2-R1_A23YTGFLT4_1 1,2,3,4,5,6,7,8 CCTCCTGTGA-CACGTCTACG 409208952 398789603 10419349 0 0.0129 0.9745 0.0255 0.0
aih-tih-sc-da06ce-R1_A23YTGFLT4_1 1,2,3,4,5,6,7,8 ACAACAGGCT-TCCACTGTTG 384163256 378094268 6068988 0 0.0121 0.9842 0.0158 0.0
aih-tih-sc-e08fa3-R1_A23YTGFLT4_1 1,2,3,4,5,6,7,8 CTTACGAACT-ACGGACTGAG 409869233 402669725 7199508 0 0.013 0.9824 0.0176 0.0
aih-tih-sc-e1cae1-R1_A23YTGFLT4_1 1,2,3,4,5,6,7,8 CTGGATTACT-AAGTGTGCTA 177544517 175004657 2539860 0 0.0056 0.9857 0.0143 0.0
aih-tih-sc-ec2fd6-R1_A23YTGFLT4_1 1,2,3,4,5,6,7,8 CCGTGAGTTC-CTTGGTATGA 284383893 279404464 4979429 0 0.009 0.9825 0.0175 0.0
aih-tih-sc-ecc0bc-R1_A23YTGFLT4_1 1,2,3,4,5,6,7,8 TTACGCGCAT-CTTAACGACA 244443028 240489492 3953536 0 0.0077 0.9838 0.0162 0.0
aih-tih-sc-eecf9f-R1_A23YTGFLT4_1 1,2,3,4,5,6,7,8 GAGCAGCTTG-TGCCAGTATT 577929366 564768671 13160695 0 0.0183 0.9772 0.0228 0.0
aih-tih-sc-f0dbdf-R1_A23YTGFLT4_1 1,2,3,4,5,6,7,8 TATCCGCGTC-GTTGCATCGT 363220655 356529162 6691493 0 0.0115 0.9816 0.0184 0.0
aih-tih-sc-f26674-R1_A23YTGFLT4_1 1,2,3,4,5,6,7,8 AGAAGACCTA-AACCGTAACA 425513346 415311468 10201878 0 0.0134 0.976 0.024 0.0
aih-tih-sc-f27606-R1_A23YTGFLT4_1 1,2,3,4,5,6,7,8 TCAGCATCTA-CCAGTGTACG 295708002 290349061 5358941 0 0.0093 0.9819 0.0181 0.0
aih-tih-sc-f2fa3a-R1_A23YTGFLT4_1 1,2,3,4,5,6,7,8 ATATTCTCGG-AGATGCTCCG 320664659 314233229 6431430 0 0.0101 0.9799 0.0201 0.0
aih-tih-sc-f6bb6f-R1_A23YTGFLT4_1 1,2,3,4,5,6,7,8 CACTTACGGC-GCTGGAGAAG 307175095 301546623 5628472 0 0.0097 0.9817 0.0183 0.0
aih-tih-sc-f7ac14-R1_A23YTGFLT4_1 1,2,3,4,5,6,7,8 AATAGGTAGG-TGGCTTATGG 294209186 289435441 4773745 0 0.0093 0.9838 0.0162 0.0
aih-tih-sc-f834a3-R1_A23YTGFLT4_1 1,2,3,4,5,6,7,8 CCACAGCCTT-GCTATTGAAG 236856159 232377609 4478550 0 0.0075 0.9811 0.0189 0.0
aih-tih-sc-f8efb2-R1_A23YTGFLT4_1 1,2,3,4,5,6,7,8 TAGGCGAATG-AGTCCAGTGA 339727786 333982818 5744968 0 0.0107 0.9831 0.0169 0.0
aih-tih-sc-fa55c3-R1_A23YTGFLT4_1 1,2,3,4,5,6,7,8 TATGGCAAGC-AACAGCAATG 301400024 296096914 5303110 0 0.0095 0.9824 0.0176 0.0
aih-tih-sc-fba77b-R1_A23YTGFLT4_1 1,2,3,4,5,6,7,8 TCTCACCAGG-TTAACAGGTC 53899860 52682250 1217610 0 0.0017 0.9774 0.0226 0.0
aih-tih-sc-fe8311-R1_A23YTGFLT4_1 1,2,3,4,5,6,7,8 CCAGACCGAT-GCTACTTGCA 395739691 387745219 7994472 0 0.0125 0.9798 0.0202 0.0
aih-tih-sc-ffabe0-R1_A23YTGFLT4_1 1,2,3,4,5,6,7,8 ATTCGGCTTA-TTAACGTCCG 306933972 302056219 4877753 0 0.0097 0.9841 0.0159 0.0
aih-tih-sc-ffd2af-R1_A23YTGFLT4_1 1,2,3,4,5,6,7,8 AAGCGCTTAG-TGTCTGTGAC 222044506 217031469 5013037 0 0.007 0.9774 0.0226 0.0
98 rows