SampleID,Lanes,Index,# Reads,# Perfect Index Reads,# One Mismatch Index Reads,# Two Mismatch Index Reads,% Reads,% Perfect Index Reads,% One Mismatch Index Reads,% Two Mismatch Index Reads
FFPE_HD789_01_RNA_13_A23YTGFLT4_1,"1,2,3,4,5,6,7,8",ATGCTTACTG-ACTGGTTCCG,458076204,450189041,7887163,0,0.0145,0.9828,0.0172,0.0
FFPE_V4_0002_RNA_0002_A23YTGFLT4_1,"1,2,3,4,5,6,7,8",TGACACGATT-GCCTAGGAAG,290128329,284675246,5453083,0,0.0092,0.9812,0.0188,0.0
NTC_0001_0001_A23YTGFLT4_1,"1,2,3,4,5,6,7,8",CAAGACTCAA-CACCGTCATA,91113,89314,1799,0,0.0,0.9803,0.0197,0.0
Undetermined,"1,2,3,4,5,6,7,8",,2398585782,2398585782,0,0,0.0758,1.0,0.0,0.0
aih-tih-sc-01c779-R1_A23YTGFLT4_1,"1,2,3,4,5,6,7,8",TCAATTCCGA-TGTAGATCCG,274170710,269966208,4204502,0,0.0087,0.9847,0.0153,0.0
aih-tih-sc-01eb49-R1_A23YTGFLT4_1,"1,2,3,4,5,6,7,8",AGGTAACAAC-GCACGATGCT,338423035,332865748,5557287,0,0.0107,0.9836,0.0164,0.0
aih-tih-sc-0754d2-R1_A23YTGFLT4_1,"1,2,3,4,5,6,7,8",ACCGAATAGA-TCAGCATCCG,30429186,29790113,639073,0,0.001,0.979,0.021,0.0
aih-tih-sc-1274d4-R1_A23YTGFLT4_1,"1,2,3,4,5,6,7,8",ATGACAGCAC-CGCTTGTTAT,264048496,258209615,5838881,0,0.0083,0.9779,0.0221,0.0
aih-tih-sc-13d441-R1_A23YTGFLT4_1,"1,2,3,4,5,6,7,8",TCCAACTGAA-TGTCCGTAGG,260390570,254931590,5458980,0,0.0082,0.979,0.021,0.0
aih-tih-sc-150e73-R1_A23YTGFLT4_1,"1,2,3,4,5,6,7,8",AGAACTAACG-TTATCGAGAG,386484599,379744999,6739600,0,0.0122,0.9826,0.0174,0.0
aih-tih-sc-184b05-R1_A23YTGFLT4_1,"1,2,3,4,5,6,7,8",CGAGCGTAGT-TGCTCACGCA,515062313,506969638,8092675,0,0.0163,0.9843,0.0157,0.0
aih-tih-sc-242a7d-R1_A23YTGFLT4_1,"1,2,3,4,5,6,7,8",CGCGGTATCT-ATTACCGATC,255272088,251300450,3971638,0,0.0081,0.9844,0.0156,0.0
aih-tih-sc-24ecfe-R1_A23YTGFLT4_1,"1,2,3,4,5,6,7,8",GACTCATCCA-GAACCAAGCG,34070927,33363483,707444,0,0.0011,0.9792,0.0208,0.0
aih-tih-sc-28eb14-R1_A23YTGFLT4_1,"1,2,3,4,5,6,7,8",ACTTCCGGCA-GACCAATTGT,386042554,380216110,5826444,0,0.0122,0.9849,0.0151,0.0
aih-tih-sc-2b9bfa-R1_A23YTGFLT4_1,"1,2,3,4,5,6,7,8",CTAACCTCAA-TCACAGTTGC,348124980,341378363,6746617,0,0.011,0.9806,0.0194,0.0
aih-tih-sc-2e5fe9-R1_A23YTGFLT4_1,"1,2,3,4,5,6,7,8",ACGAGACGTC-CGGTCTCTCT,414358416,406731844,7626572,0,0.0131,0.9816,0.0184,0.0
aih-tih-sc-318819-R1_A23YTGFLT4_1,"1,2,3,4,5,6,7,8",GCCAGCTATC-TTGTTCGTGT,257880009,253256411,4623598,0,0.0082,0.9821,0.0179,0.0
aih-tih-sc-31d31f-R1_A23YTGFLT4_1,"1,2,3,4,5,6,7,8",TCGCGACACT-CGAGTAATGT,195659080,192211714,3447366,0,0.0062,0.9824,0.0176,0.0
aih-tih-sc-3270ab-R1_A23YTGFLT4_1,"1,2,3,4,5,6,7,8",GTACAGACCG-GTTCTAATGG,452809190,444048279,8760911,0,0.0143,0.9807,0.0193,0.0
aih-tih-sc-3282fd-R1_A23YTGFLT4_1,"1,2,3,4,5,6,7,8",ATAAGCGGAG-CTGTTCTACG,246123499,236474420,9649079,0,0.0078,0.9608,0.0392,0.0
aih-tih-sc-3377ac-R1_A23YTGFLT4_1,"1,2,3,4,5,6,7,8",ATGTTGCCAC-TAGAAGCCAT,355150504,348826428,6324076,0,0.0112,0.9822,0.0178,0.0
aih-tih-sc-377071-R1_A23YTGFLT4_1,"1,2,3,4,5,6,7,8",TATGCGTAGC-TCAGAGGCAC,328776315,323303591,5472724,0,0.0104,0.9834,0.0166,0.0
aih-tih-sc-3abdf4-R1_A23YTGFLT4_1,"1,2,3,4,5,6,7,8",GTTGCATCAA-GTTGATGCGA,242640128,238677463,3962665,0,0.0077,0.9837,0.0163,0.0
aih-tih-sc-3b436b-R1_A23YTGFLT4_1,"1,2,3,4,5,6,7,8",GAGATGAGAG-GAATGGCGTT,130184139,126788210,3395929,0,0.0041,0.9739,0.0261,0.0
aih-tih-sc-45523c-R1_A23YTGFLT4_1,"1,2,3,4,5,6,7,8",CGCCAAGGTA-GATAGTGTTC,243720785,239185379,4535406,0,0.0077,0.9814,0.0186,0.0
aih-tih-sc-49909d-R1_A23YTGFLT4_1,"1,2,3,4,5,6,7,8",AACTCTCTAC-ACGGCTTCTC,268831957,262555245,6276712,0,0.0085,0.9767,0.0233,0.0
aih-tih-sc-4bcd26-R1_A23YTGFLT4_1,"1,2,3,4,5,6,7,8",CCAGTCGTCA-CGCTAGGCTA,196693752,193167351,3526401,0,0.0062,0.9821,0.0179,0.0
aih-tih-sc-538ae3-R1_A23YTGFLT4_1,"1,2,3,4,5,6,7,8",AATCTGCAGT-TGCGAAGTGA,409803262,403719151,6084111,0,0.013,0.9852,0.0148,0.0
aih-tih-sc-5519ab-R1_A23YTGFLT4_1,"1,2,3,4,5,6,7,8",CAGCAGGTCA-CACTTAGGTA,350495069,345438176,5056893,0,0.0111,0.9856,0.0144,0.0
aih-tih-sc-56cab8-R1_A23YTGFLT4_1,"1,2,3,4,5,6,7,8",AGTATCCGAT-TATTGCGCTA,356700620,347595468,9105152,0,0.0113,0.9745,0.0255,0.0
aih-tih-sc-573e21-R1_A23YTGFLT4_1,"1,2,3,4,5,6,7,8",TAGCGACGGA-GTAACGTTCA,324676425,317512919,7163506,0,0.0103,0.9779,0.0221,0.0
aih-tih-sc-598a93-R1_A23YTGFLT4_1,"1,2,3,4,5,6,7,8",ACTCCGAAGC-TCCGTGTTGC,61714805,60672462,1042343,0,0.002,0.9831,0.0169,0.0
aih-tih-sc-5b8b4a-R1_A23YTGFLT4_1,"1,2,3,4,5,6,7,8",GTGTCTACAG-ACACTAGCAT,344540082,338731595,5808487,0,0.0109,0.9831,0.0169,0.0
aih-tih-sc-5ceb9a-R1_A23YTGFLT4_1,"1,2,3,4,5,6,7,8",CATAAGCGAC-CCTCTTCAAG,288049684,282517820,5531864,0,0.0091,0.9808,0.0192,0.0
aih-tih-sc-607ec3-R1_A23YTGFLT4_1,"1,2,3,4,5,6,7,8",CTATAACGGA-CGTGACATTC,186338622,182741470,3597152,0,0.0059,0.9807,0.0193,0.0
aih-tih-sc-64cd51-R1_A23YTGFLT4_1,"1,2,3,4,5,6,7,8",CAACTGCGCA-AGTGTATCCG,316791961,309955415,6836546,0,0.01,0.9784,0.0216,0.0
aih-tih-sc-64fc89-R1_A23YTGFLT4_1,"1,2,3,4,5,6,7,8",TTACTTCGTG-AAGATCGGAT,347326471,341574828,5751643,0,0.011,0.9834,0.0166,0.0
aih-tih-sc-656590-R1_A23YTGFLT4_1,"1,2,3,4,5,6,7,8",AGTAAGGAGA-ATGCTTGGTC,270745916,266334191,4411725,0,0.0086,0.9837,0.0163,0.0
aih-tih-sc-67e6e5-R1_A23YTGFLT4_1,"1,2,3,4,5,6,7,8",AGTAGTGTTG-AACACCTCTT,373991136,367237510,6753626,0,0.0118,0.9819,0.0181,0.0
aih-tih-sc-69be7e-R1_A23YTGFLT4_1,"1,2,3,4,5,6,7,8",GTATGCCACA-CCGAGTCTTC,309834151,304328290,5505861,0,0.0098,0.9822,0.0178,0.0
aih-tih-sc-6c4b48-R1_A23YTGFLT4_1,"1,2,3,4,5,6,7,8",TTCTCTTAGC-TCCTCGAGCT,463894115,456106179,7787936,0,0.0147,0.9832,0.0168,0.0
aih-tih-sc-6cc13c-R1_A23YTGFLT4_1,"1,2,3,4,5,6,7,8",TCAGTTCGAT-CTGAGTCCTT,407102797,400092450,7010347,0,0.0129,0.9828,0.0172,0.0
aih-tih-sc-6d9e6f-R1_A23YTGFLT4_1,"1,2,3,4,5,6,7,8",AGGATGTCCA-ACTGGACGTT,345491767,339214723,6277044,0,0.0109,0.9818,0.0182,0.0
aih-tih-sc-714733-R1_A23YTGFLT4_1,"1,2,3,4,5,6,7,8",CCGATAGTAG-GAGTTGCATA,347229439,337594828,9634611,0,0.011,0.9723,0.0277,0.0
aih-tih-sc-776623-R1_A23YTGFLT4_1,"1,2,3,4,5,6,7,8",AGATTAGCGT-CGCCTTATAT,350849616,341283680,9565936,0,0.0111,0.9727,0.0273,0.0
aih-tih-sc-790e56-R1_A23YTGFLT4_1,"1,2,3,4,5,6,7,8",AACAACACAG-GAACATTGGC,171715678,168499235,3216443,0,0.0054,0.9813,0.0187,0.0
aih-tih-sc-7f9674-R1_A23YTGFLT4_1,"1,2,3,4,5,6,7,8",GAACCGCATT-CATTATGCCT,399785742,393033359,6752383,0,0.0126,0.9831,0.0169,0.0
aih-tih-sc-7fa0fb-R1_A23YTGFLT4_1,"1,2,3,4,5,6,7,8",CTCCGCCATA-GCGTTCAGCA,188899914,185437255,3462659,0,0.006,0.9817,0.0183,0.0
aih-tih-sc-816ec7-R1_A23YTGFLT4_1,"1,2,3,4,5,6,7,8",TGGAGATCGA-CAGCGGTATG,379746523,368803235,10943288,0,0.012,0.9712,0.0288,0.0
aih-tih-sc-885658-R1_A23YTGFLT4_1,"1,2,3,4,5,6,7,8",CGCACTGGTA-TTGACCGTCT,273698950,269419852,4279098,0,0.0087,0.9844,0.0156,0.0
aih-tih-sc-89f3a3-R1_A23YTGFLT4_1,"1,2,3,4,5,6,7,8",CGATGTCTTG-CCGAACGTTC,445381407,437752038,7629369,0,0.0141,0.9829,0.0171,0.0
aih-tih-sc-8c7069-R1_A23YTGFLT4_1,"1,2,3,4,5,6,7,8",CGCACTTCGT-AATATGCCAG,242833193,238818548,4014645,0,0.0077,0.9835,0.0165,0.0
aih-tih-sc-8e3550-R1_A23YTGFLT4_1,"1,2,3,4,5,6,7,8",AGCAATTCAC-TCATCGTCTG,156991583,154396859,2594724,0,0.005,0.9835,0.0165,0.0
aih-tih-sc-92d360-R1_A23YTGFLT4_1,"1,2,3,4,5,6,7,8",TCACCATAAG-AAGTTCAGGA,245131346,240758803,4372543,0,0.0077,0.9822,0.0178,0.0
aih-tih-sc-966ec5-R1_A23YTGFLT4_1,"1,2,3,4,5,6,7,8",TCTAGCTGCG-ATAGGTAAGG,349161385,342852564,6308821,0,0.011,0.9819,0.0181,0.0
aih-tih-sc-96d0f6-R1_A23YTGFLT4_1,"1,2,3,4,5,6,7,8",GCCACCTAGT-TGCGATGTAT,353135022,344915599,8219423,0,0.0112,0.9767,0.0233,0.0
aih-tih-sc-9703f5-R1_A23YTGFLT4_1,"1,2,3,4,5,6,7,8",CCGAACAGAG-TGATACTCGC,170368386,165942685,4425701,0,0.0054,0.974,0.026,0.0
aih-tih-sc-992d78-R1_A23YTGFLT4_1,"1,2,3,4,5,6,7,8",CCTCGTTGGA-GACTGCGTTA,272237069,266518970,5718099,0,0.0086,0.979,0.021,0.0
aih-tih-sc-9b89b4-R1_A23YTGFLT4_1,"1,2,3,4,5,6,7,8",TCGAACACGA-GCGAGGTTCT,328919940,323235840,5684100,0,0.0104,0.9827,0.0173,0.0
aih-tih-sc-9e2647-R1_A23YTGFLT4_1,"1,2,3,4,5,6,7,8",GCCAACAGAC-CGTTCACGTT,330259038,324093078,6165960,0,0.0104,0.9813,0.0187,0.0
aih-tih-sc-a51633-R1_A23YTGFLT4_1,"1,2,3,4,5,6,7,8",CGGACGATTC-TAGGTGGTGG,514898137,506940906,7957231,0,0.0163,0.9845,0.0155,0.0
aih-tih-sc-a558c6-R1_A23YTGFLT4_1,"1,2,3,4,5,6,7,8",CCTCTATAGA-GTACTTCCAA,149616053,146280244,3335809,0,0.0047,0.9777,0.0223,0.0
aih-tih-sc-a8a787-R1_A23YTGFLT4_1,"1,2,3,4,5,6,7,8",CTTGCTATTC-TAGAGTCACG,544323379,534061562,10261817,0,0.0172,0.9811,0.0189,0.0
aih-tih-sc-a97ce1-R1_A23YTGFLT4_1,"1,2,3,4,5,6,7,8",AACGAAGATC-TGTGGTCTAA,219225266,214747970,4477296,0,0.0069,0.9796,0.0204,0.0
aih-tih-sc-a9fe91-R1_A23YTGFLT4_1,"1,2,3,4,5,6,7,8",TTCCTCACGT-ACATGAGCCA,525423182,516541716,8881466,0,0.0166,0.9831,0.0169,0.0
aih-tih-sc-b567d0-R1_A23YTGFLT4_1,"1,2,3,4,5,6,7,8",AGATGTAAGG-CTGTACCAGG,232958529,229157534,3800995,0,0.0074,0.9837,0.0163,0.0
aih-tih-sc-b6a2e8-R1_A23YTGFLT4_1,"1,2,3,4,5,6,7,8",AGTTCAGGCG-CACAGCTATT,435043506,427374433,7669073,0,0.0137,0.9824,0.0176,0.0
aih-tih-sc-b6fd19-R1_A23YTGFLT4_1,"1,2,3,4,5,6,7,8",TACGCTACTT-TTAGCGTCTT,417269473,409731816,7537657,0,0.0132,0.9819,0.0181,0.0
aih-tih-sc-b8457f-R1_A23YTGFLT4_1,"1,2,3,4,5,6,7,8",TCGACGGCAA-GTAGTTGTGT,421399546,414329277,7070269,0,0.0133,0.9832,0.0168,0.0
aih-tih-sc-bbc28d-R1_A23YTGFLT4_1,"1,2,3,4,5,6,7,8",CGGAACACAA-AACTCTACCG,209629253,205024756,4604497,0,0.0066,0.978,0.022,0.0
aih-tih-sc-c35cc3-R1_A23YTGFLT4_1,"1,2,3,4,5,6,7,8",CTCTATTGAG-CACGCAAGTC,253316999,244731142,8585857,0,0.008,0.9661,0.0339,0.0
aih-tih-sc-c400f1-R1_A23YTGFLT4_1,"1,2,3,4,5,6,7,8",GACCTACTAT-ATTGTAAGCG,375300071,368729860,6570211,0,0.0119,0.9825,0.0175,0.0
aih-tih-sc-c493d4-R1_A23YTGFLT4_1,"1,2,3,4,5,6,7,8",CCTAAGCTGA-CGTCGCATCT,244118574,239281775,4836799,0,0.0077,0.9802,0.0198,0.0
aih-tih-sc-cece97-R1_A23YTGFLT4_1,"1,2,3,4,5,6,7,8",GCAATCTGCT-ACGAACCAAG,349033322,342513264,6520058,0,0.011,0.9813,0.0187,0.0
aih-tih-sc-d1f1a3-R1_A23YTGFLT4_1,"1,2,3,4,5,6,7,8",AGACTAGATG-CGTAACACTA,364170807,356998006,7172801,0,0.0115,0.9803,0.0197,0.0
aih-tih-sc-d5fda9-R1_A23YTGFLT4_1,"1,2,3,4,5,6,7,8",CCTGACATCT-TAGCTACCAG,29323962,28518008,805954,0,0.0009,0.9725,0.0275,0.0
aih-tih-sc-d666f1-R1_A23YTGFLT4_1,"1,2,3,4,5,6,7,8",TAACTTGGTC-GTCGTGAATC,267931025,263144199,4786826,0,0.0085,0.9821,0.0179,0.0
aih-tih-sc-d963a2-R1_A23YTGFLT4_1,"1,2,3,4,5,6,7,8",CCTCCTGTGA-CACGTCTACG,409208952,398789603,10419349,0,0.0129,0.9745,0.0255,0.0
aih-tih-sc-da06ce-R1_A23YTGFLT4_1,"1,2,3,4,5,6,7,8",ACAACAGGCT-TCCACTGTTG,384163256,378094268,6068988,0,0.0121,0.9842,0.0158,0.0
aih-tih-sc-e08fa3-R1_A23YTGFLT4_1,"1,2,3,4,5,6,7,8",CTTACGAACT-ACGGACTGAG,409869233,402669725,7199508,0,0.013,0.9824,0.0176,0.0
aih-tih-sc-e1cae1-R1_A23YTGFLT4_1,"1,2,3,4,5,6,7,8",CTGGATTACT-AAGTGTGCTA,177544517,175004657,2539860,0,0.0056,0.9857,0.0143,0.0
aih-tih-sc-ec2fd6-R1_A23YTGFLT4_1,"1,2,3,4,5,6,7,8",CCGTGAGTTC-CTTGGTATGA,284383893,279404464,4979429,0,0.009,0.9825,0.0175,0.0
aih-tih-sc-ecc0bc-R1_A23YTGFLT4_1,"1,2,3,4,5,6,7,8",TTACGCGCAT-CTTAACGACA,244443028,240489492,3953536,0,0.0077,0.9838,0.0162,0.0
aih-tih-sc-eecf9f-R1_A23YTGFLT4_1,"1,2,3,4,5,6,7,8",GAGCAGCTTG-TGCCAGTATT,577929366,564768671,13160695,0,0.0183,0.9772,0.0228,0.0
aih-tih-sc-f0dbdf-R1_A23YTGFLT4_1,"1,2,3,4,5,6,7,8",TATCCGCGTC-GTTGCATCGT,363220655,356529162,6691493,0,0.0115,0.9816,0.0184,0.0
aih-tih-sc-f26674-R1_A23YTGFLT4_1,"1,2,3,4,5,6,7,8",AGAAGACCTA-AACCGTAACA,425513346,415311468,10201878,0,0.0134,0.976,0.024,0.0
aih-tih-sc-f27606-R1_A23YTGFLT4_1,"1,2,3,4,5,6,7,8",TCAGCATCTA-CCAGTGTACG,295708002,290349061,5358941,0,0.0093,0.9819,0.0181,0.0
aih-tih-sc-f2fa3a-R1_A23YTGFLT4_1,"1,2,3,4,5,6,7,8",ATATTCTCGG-AGATGCTCCG,320664659,314233229,6431430,0,0.0101,0.9799,0.0201,0.0
aih-tih-sc-f6bb6f-R1_A23YTGFLT4_1,"1,2,3,4,5,6,7,8",CACTTACGGC-GCTGGAGAAG,307175095,301546623,5628472,0,0.0097,0.9817,0.0183,0.0
aih-tih-sc-f7ac14-R1_A23YTGFLT4_1,"1,2,3,4,5,6,7,8",AATAGGTAGG-TGGCTTATGG,294209186,289435441,4773745,0,0.0093,0.9838,0.0162,0.0
aih-tih-sc-f834a3-R1_A23YTGFLT4_1,"1,2,3,4,5,6,7,8",CCACAGCCTT-GCTATTGAAG,236856159,232377609,4478550,0,0.0075,0.9811,0.0189,0.0
aih-tih-sc-f8efb2-R1_A23YTGFLT4_1,"1,2,3,4,5,6,7,8",TAGGCGAATG-AGTCCAGTGA,339727786,333982818,5744968,0,0.0107,0.9831,0.0169,0.0
aih-tih-sc-fa55c3-R1_A23YTGFLT4_1,"1,2,3,4,5,6,7,8",TATGGCAAGC-AACAGCAATG,301400024,296096914,5303110,0,0.0095,0.9824,0.0176,0.0
aih-tih-sc-fba77b-R1_A23YTGFLT4_1,"1,2,3,4,5,6,7,8",TCTCACCAGG-TTAACAGGTC,53899860,52682250,1217610,0,0.0017,0.9774,0.0226,0.0
aih-tih-sc-fe8311-R1_A23YTGFLT4_1,"1,2,3,4,5,6,7,8",CCAGACCGAT-GCTACTTGCA,395739691,387745219,7994472,0,0.0125,0.9798,0.0202,0.0
aih-tih-sc-ffabe0-R1_A23YTGFLT4_1,"1,2,3,4,5,6,7,8",ATTCGGCTTA-TTAACGTCCG,306933972,302056219,4877753,0,0.0097,0.9841,0.0159,0.0
aih-tih-sc-ffd2af-R1_A23YTGFLT4_1,"1,2,3,4,5,6,7,8",AAGCGCTTAG-TGTCTGTGAC,222044506,217031469,5013037,0,0.007,0.9774,0.0226,0.0