Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/40/1e01c6db51b149df61df65abe0b240/aih-tih-sc-24ecfe-R1_A23YTGFLT4_1_1.fastp.fastq.gz
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/19/efedf9c256727b30ecd682c62a130f/aih-tih-sc-24ecfe-R1_A23YTGFLT4_1.Chimeric.out.junction
Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/starfusion/ctat_genome_lib_build_dir
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c7/aa2947fc9d3aa26ad1611ed239834a/.command.sh
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c7/aa2947fc9d3aa26ad1611ed239834a/.command.run
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/40/1e01c6db51b149df61df65abe0b240/aih-tih-sc-24ecfe-R1_A23YTGFLT4_1_2.fastp.fastq.gz
==> STAGING COMPLETE (6 inputs)
-ctat genome lib [/tmp/nxf.DaP6ZeAZMZ/ctat_genome_lib_build_dir] validates.
CMD: mkdir -p /tmp/nxf.DaP6ZeAZMZ/./_starF_checkpoints
CMD: mkdir -p /tmp/nxf.DaP6ZeAZMZ/./star-fusion.preliminary
-sample contains 33031530 rnaseq fragments
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes --genome_lib_dir /tmp/nxf.DaP6ZeAZMZ/ctat_genome_lib_build_dir -J /tmp/nxf.DaP6ZeAZMZ/aih-tih-sc-24ecfe-R1_A23YTGFLT4_1.Chimeric.out.junction -O /tmp/nxf.DaP6ZeAZMZ/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4
-parsing fusion evidence: /tmp/nxf.DaP6ZeAZMZ/aih-tih-sc-24ecfe-R1_A23YTGFLT4_1.Chimeric.out.junction
-building interval tree based on /tmp/nxf.DaP6ZeAZMZ/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.10 min).
-mapping reads to genes
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[510000], rate=66666.67/min -building interval tree based on /tmp/nxf.DaP6ZeAZMZ/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.08 min).
-mapping reads to genes
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[510000], rate=61818.18/min -building interval tree based on /tmp/nxf.DaP6ZeAZMZ/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.10 min).
-mapping reads to genes
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[510000], rate=56983.24/min -building interval tree based on /tmp/nxf.DaP6ZeAZMZ/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.08 min).
-mapping reads to genes
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[510000], rate=56561.92/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads -J /tmp/nxf.DaP6ZeAZMZ/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --genome_lib_dir /tmp/nxf.DaP6ZeAZMZ/ctat_genome_lib_build_dir --filt_file /tmp/nxf.DaP6ZeAZMZ/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail -M 50 > /tmp/nxf.DaP6ZeAZMZ/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-parsing /tmp/nxf.DaP6ZeAZMZ/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info.
6000000.00 reads per min processed...
6000000.00 reads per min processed...
4500000.00 reads per min processed...
3428571.43 reads per min processed...
3333333.33 reads per min processed...
3000000.00 reads per min processed...
3000000.00 reads per min processed...
2823529.41 reads per min processed...
2842105.26 reads per min processed...
2857142.86 reads per min processed...
3000000.00 reads per min processed...
3130434.78 reads per min processed...
3120000.00 reads per min processed...
3111111.11 reads per min processed...
3103448.28 reads per min processed...
3096774.19 reads per min processed...
3090909.09 reads per min processed...
done.
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict -J /tmp/nxf.DaP6ZeAZMZ/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -O /tmp/nxf.DaP6ZeAZMZ/./star-fusion.preliminary/star-fusion
-parsing fusion evidence: /tmp/nxf.DaP6ZeAZMZ/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-outputting fusion candidates to file: /tmp/nxf.DaP6ZeAZMZ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter --fusion_preds /tmp/nxf.DaP6ZeAZMZ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary -J /tmp/nxf.DaP6ZeAZMZ/aih-tih-sc-24ecfe-R1_A23YTGFLT4_1.Chimeric.out.junction --tmpdir /tmp --min_junction_reads 0 --min_sum_frags 1 --require_LDAS 0 --max_promiscuity 10 --min_pct_dom_promiscuity 20 --min_novel_junction_support 1 --min_alt_pct_junction 10 --aggregate_novel_junction_dist 5 --min_spanning_frags_only 1 --genome_lib_dir /tmp/nxf.DaP6ZeAZMZ/ctat_genome_lib_build_dir --out_prefix /tmp/nxf.DaP6ZeAZMZ/./star-fusion.preliminary/star-fusion
CMD: mkdir -p /tmp/nxf.DaP6ZeAZMZ/./star-fusion.preliminary/star-fusion.filter.intermediates_dir
EM: Starting log likelihood: -94203.146465
EM: Round [1] log likelihood: -94046.630710
EM: Round [2] log likelihood: -93994.543201
EM: Round [3] log likelihood: -93969.960261
EM: Round [4] log likelihood: -93956.940408
EM: Round [5] log likelihood: -93949.706439
EM: Round [6] log likelihood: -93945.548597
EM: Round [7] log likelihood: -93943.072455
EM: Round [8] log likelihood: -93941.539389
EM: Round [9] log likelihood: -93940.551495
EM: Round [10] log likelihood: -93939.889879
EM: Round [11] log likelihood: -93939.430826
EM: Round [12] log likelihood: -93939.102189
EM: Round [13] log likelihood: -93938.860461
EM: Round [14] log likelihood: -93938.678492
EM: Round [15] log likelihood: -93938.538779
EM: Round [16] log likelihood: -93938.429684
EM: Round [17] log likelihood: -93938.343246
EM: Round [18] log likelihood: -93938.273888
EM: Round [19] log likelihood: -93938.217611
EM: Round [20] log likelihood: -93938.171493
EM: Round [21] log likelihood: -93938.133365
EM: Round [22] log likelihood: -93938.101590
EM: Round [23] log likelihood: -93938.074914
EM: Round [24] log likelihood: -93938.052370
EM: Round [25] log likelihood: -93938.033200
EM: Round [26] log likelihood: -93938.016806
EM: Round [27] log likelihood: -93938.002710
EM: Round [28] log likelihood: -93937.990530
EM: Round [29] log likelihood: -93937.979954
EM: Round [30] log likelihood: -93937.970729
EM: Round [31] log likelihood: -93937.962649
EM: Round [32] log likelihood: -93937.955540
EM: Round [33] log likelihood: -93937.949262
EM: Round [34] log likelihood: -93937.943695
EM: Round [35] log likelihood: -93937.938740
EM: Round [36] log likelihood: -93937.934314
EM: Round [37] log likelihood: -93937.930346
EM: Round [38] log likelihood: -93937.926776
EM: Round [39] log likelihood: -93937.923553
EM: Round [40] log likelihood: -93937.920634
EM: Round [41] log likelihood: -93937.917982
EM: Round [42] log likelihood: -93937.915566
EM: Round [43] log likelihood: -93937.913357
EM: Round [44] log likelihood: -93937.911332
EM: Round [45] log likelihood: -93937.909470
EM: Round [46] log likelihood: -93937.907755
EM: Round [47] log likelihood: -93937.906169
EM: Round [48] log likelihood: -93937.904701
EM: Round [49] log likelihood: -93937.903338
EM: Round [50] log likelihood: -93937.902070
EM: Round [51] log likelihood: -93937.900887
EM: Round [52] log likelihood: -93937.899782
EM: Round [53] log likelihood: -93937.898748
EM: Round [54] log likelihood: -93937.897779
EM: Round [55] log likelihood: -93937.896869
EM: Round [56] log likelihood: -93937.896013
EM: Round [57] log likelihood: -93937.895206
EM: Round [58] log likelihood: -93937.894446
EM: Round [59] log likelihood: -93937.893728
EM: Round [60] log likelihood: -93937.893049
EM: Round [61] log likelihood: -93937.892406
EM: Round [62] log likelihood: -93937.891797
EM: Round [63] log likelihood: -93937.891220
EM: Round [64] log likelihood: -93937.890672
EM: Round [65] log likelihood: -93937.890151
EM: Round [66] log likelihood: -93937.889656
EM: Round [67] log likelihood: -93937.889185
EM: Round [68] log likelihood: -93937.888737
EM: Round [69] log likelihood: -93937.888310
EM: Round [70] log likelihood: -93937.887903
EM: Round [71] log likelihood: -93937.887515
EM: Round [72] log likelihood: -93937.887145
EM: Round [73] log likelihood: -93937.886791
EM: Round [74] log likelihood: -93937.886453
EM: Round [75] log likelihood: -93937.886131
EM: Round [76] log likelihood: -93937.885822
EM: Round [77] log likelihood: -93937.885528
EM: Round [78] log likelihood: -93937.885246
EM: Round [79] log likelihood: -93937.884976
EM: Round [80] log likelihood: -93937.884718
EM: Round [81] log likelihood: -93937.884471
EM: Round [82] log likelihood: -93937.884234
EM: Round [83] log likelihood: -93937.884007
EM: Round [84] log likelihood: -93937.883790
EM: Round [85] log likelihood: -93937.883582
EM: Round [86] log likelihood: -93937.883382
EM: Round [87] log likelihood: -93937.883191
EM: Round [88] log likelihood: -93937.883008
EM: Round [89] log likelihood: -93937.882832
EM: Round [90] log likelihood: -93937.882663
EM: Round [91] log likelihood: -93937.882501
EM: Round [92] log likelihood: -93937.882345
EM: Round [93] log likelihood: -93937.882196
EM: Round [94] log likelihood: -93937.882053
EM: Round [95] log likelihood: -93937.881915
EM: Round [96] log likelihood: -93937.881783
EM: Round [97] log likelihood: -93937.881656
EM: Round [98] log likelihood: -93937.881534
EM: Round [99] log likelihood: -93937.881417
EM: Round [100] log likelihood: -93937.881304
EM: Round [101] log likelihood: -93937.881196
EM: Round [102] log likelihood: -93937.881092
EM: Round [103] log likelihood: -93937.880992
EM: Round [104] log likelihood: -93937.880896
EM: Stopping iterations at round 104 due to insufficient improvement in likelihood.
EM: Starting log likelihood: -93819.677135
EM: Round [1] log likelihood: -93711.654871
EM: Round [2] log likelihood: -93675.040445
EM: Round [3] log likelihood: -93657.848388
EM: Round [4] log likelihood: -93648.817764
EM: Round [5] log likelihood: -93643.844359
EM: Round [6] log likelihood: -93641.014773
EM: Round [7] log likelihood: -93639.349386
EM: Round [8] log likelihood: -93638.331305
EM: Round [9] log likelihood: -93637.683287
EM: Round [10] log likelihood: -93637.253784
EM: Round [11] log likelihood: -93636.957940
EM: Round [12] log likelihood: -93636.746881
EM: Round [13] log likelihood: -93636.591568
EM: Round [14] log likelihood: -93636.474178
EM: Round [15] log likelihood: -93636.383408
EM: Round [16] log likelihood: -93636.311856
EM: Round [17] log likelihood: -93636.254525
EM: Round [18] log likelihood: -93636.207948
EM: Round [19] log likelihood: -93636.169654
EM: Round [20] log likelihood: -93636.137847
EM: Round [21] log likelihood: -93636.111190
EM: Round [22] log likelihood: -93636.088673
EM: Round [23] log likelihood: -93636.069519
EM: Round [24] log likelihood: -93636.053123
EM: Round [25] log likelihood: -93636.039007
EM: Round [26] log likelihood: -93636.026791
EM: Round [27] log likelihood: -93636.016167
EM: Round [28] log likelihood: -93636.006886
EM: Round [29] log likelihood: -93635.998744
EM: Round [30] log likelihood: -93635.991571
EM: Round [31] log likelihood: -93635.985228
EM: Round [32] log likelihood: -93635.979598
EM: Round [33] log likelihood: -93635.974583
EM: Round [34] log likelihood: -93635.970100
EM: Round [35] log likelihood: -93635.966079
EM: Round [36] log likelihood: -93635.962461
EM: Round [37] log likelihood: -93635.959194
EM: Round [38] log likelihood: -93635.956236
EM: Round [39] log likelihood: -93635.953548
EM: Round [40] log likelihood: -93635.951100
EM: Round [41] log likelihood: -93635.948863
EM: Round [42] log likelihood: -93635.946813
EM: Round [43] log likelihood: -93635.944930
EM: Round [44] log likelihood: -93635.943196
EM: Round [45] log likelihood: -93635.941594
EM: Round [46] log likelihood: -93635.940112
EM: Round [47] log likelihood: -93635.938736
EM: Round [48] log likelihood: -93635.937457
EM: Round [49] log likelihood: -93635.936266
EM: Round [50] log likelihood: -93635.935153
EM: Round [51] log likelihood: -93635.934113
EM: Round [52] log likelihood: -93635.933138
EM: Round [53] log likelihood: -93635.932223
EM: Round [54] log likelihood: -93635.931362
EM: Round [55] log likelihood: -93635.930553
EM: Round [56] log likelihood: -93635.929789
EM: Round [57] log likelihood: -93635.929068
EM: Round [58] log likelihood: -93635.928387
EM: Round [59] log likelihood: -93635.927742
EM: Round [60] log likelihood: -93635.927132
EM: Round [61] log likelihood: -93635.926553
EM: Round [62] log likelihood: -93635.926003
EM: Round [63] log likelihood: -93635.925481
EM: Round [64] log likelihood: -93635.924985
EM: Round [65] log likelihood: -93635.924513
EM: Round [66] log likelihood: -93635.924064
EM: Round [67] log likelihood: -93635.923636
EM: Round [68] log likelihood: -93635.923228
EM: Round [69] log likelihood: -93635.922839
EM: Round [70] log likelihood: -93635.922468
EM: Round [71] log likelihood: -93635.922114
EM: Round [72] log likelihood: -93635.921775
EM: Round [73] log likelihood: -93635.921452
EM: Round [74] log likelihood: -93635.921143
EM: Round [75] log likelihood: -93635.920848
EM: Round [76] log likelihood: -93635.920565
EM: Round [77] log likelihood: -93635.920295
EM: Round [78] log likelihood: -93635.920036
EM: Round [79] log likelihood: -93635.919788
EM: Round [80] log likelihood: -93635.919551
EM: Round [81] log likelihood: -93635.919324
EM: Round [82] log likelihood: -93635.919106
EM: Round [83] log likelihood: -93635.918897
EM: Round [84] log likelihood: -93635.918698
EM: Round [85] log likelihood: -93635.918506
EM: Round [86] log likelihood: -93635.918322
EM: Round [87] log likelihood: -93635.918146
EM: Round [88] log likelihood: -93635.917977
EM: Round [89] log likelihood: -93635.917814
EM: Round [90] log likelihood: -93635.917659
EM: Round [91] log likelihood: -93635.917509
EM: Round [92] log likelihood: -93635.917366
EM: Round [93] log likelihood: -93635.917228
EM: Round [94] log likelihood: -93635.917096
EM: Round [95] log likelihood: -93635.916969
EM: Round [96] log likelihood: -93635.916847
EM: Round [97] log likelihood: -93635.916730
EM: Round [98] log likelihood: -93635.916617
EM: Round [99] log likelihood: -93635.916509
EM: Round [100] log likelihood: -93635.916405
EM: Round [101] log likelihood: -93635.916305
EM: Stopping iterations at round 101 due to insufficient improvement in likelihood.
CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.DaP6ZeAZMZ/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20 --fusion_preds /tmp/nxf.DaP6ZeAZMZ/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.DaP6ZeAZMZ/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.DaP6ZeAZMZ/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.DaP6ZeAZMZ/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.DaP6ZeAZMZ/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter --genome_lib_dir /tmp/nxf.DaP6ZeAZMZ/ctat_genome_lib_build_dir --max_promiscuity 10 --min_pct_dom_promiscuity 20
CMD: cp /tmp/nxf.DaP6ZeAZMZ/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.DaP6ZeAZMZ/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter
CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.DaP6ZeAZMZ/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.DaP6ZeAZMZ/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged
CMD: ln -sf /tmp/nxf.DaP6ZeAZMZ/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.DaP6ZeAZMZ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered
* Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.DaP6ZeAZMZ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 33031530 > /tmp/nxf.DaP6ZeAZMZ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM
* Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.DaP6ZeAZMZ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.DaP6ZeAZMZ/ctat_genome_lib_build_dir > /tmp/nxf.DaP6ZeAZMZ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.DaP6ZeAZMZ/ctat_genome_lib_build_dir --annotate /tmp/nxf.DaP6ZeAZMZ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.DaP6ZeAZMZ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot
* Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.DaP6ZeAZMZ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.DaP6ZeAZMZ/ctat_genome_lib_build_dir
-done, see /tmp/nxf.DaP6ZeAZMZ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.DaP6ZeAZMZ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.DaP6ZeAZMZ/ctat_genome_lib_build_dir
-filter_likely_RT_artifacts: (pass: 525, filtered: 5106)
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.DaP6ZeAZMZ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001
* Running CMD: cp /tmp/nxf.DaP6ZeAZMZ/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv
* Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.DaP6ZeAZMZ/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGL.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000243753.5]
WARNING, no entry stored in dbm for [ENSG00000181126.13]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000224086.6]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000285756.2]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000285756.2]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000285756.2]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000285756.2]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000285756.2]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000285756.2]
WARNING, no entry stored in dbm for [ENSG00000276758.1]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000286168.2]
WARNING, no entry stored in dbm for [ENSG00000230305.2]
WARNING, no entry stored in dbm for [ENSG00000259203.2]
WARNING, no entry stored in dbm for [ENSG00000244257.5]
WARNING, no entry stored in dbm for [ENSG00000251301.7]
WARNING, no entry stored in dbm for [ENSG00000229205.5]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000286387.1]
WARNING, no entry stored in dbm for [ENSG00000256282.1]
WARNING, no entry stored in dbm for [ENSG00000248205.1]
WARNING, no entry stored in dbm for [ENSG00000204623.9]
WARNING, no entry stored in dbm for [ENSG00000286215.1]
WARNING, no entry stored in dbm for [ENSG00000287100.1]
WARNING, no entry stored in dbm for [ENSG00000254485.5]
WARNING, no entry stored in dbm for [ENSG00000261526.2]
WARNING, no entry stored in dbm for [ENSG00000225840.2]
WARNING, no entry stored in dbm for [ENSG00000241369.6]
WARNING, no entry stored in dbm for [ENSG00000228303.1]
WARNING, no entry stored in dbm for [ENSG00000228125.2]
WARNING, no entry stored in dbm for [ENSG00000250125.4]
WARNING, no entry stored in dbm for [ENSG00000287274.1]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000267272.5]
WARNING, no entry stored in dbm for [ENSG00000241899.1]
WARNING, no entry stored in dbm for [ENSG00000277449.1]
WARNING, no entry stored in dbm for [ENSG00000261054.1]
WARNING, no entry stored in dbm for [ENSG00000261656.6]
WARNING, no entry stored in dbm for [ENSG00000287882.1]
WARNING, no entry stored in dbm for [ENSG00000267046.1]
WARNING, no entry stored in dbm for [ENSG00000224597.10]
WARNING, no entry stored in dbm for [ENSG00000280594.1]
WARNING, no entry stored in dbm for [ENSG00000257702.3]
WARNING, no entry stored in dbm for [ENSG00000201527.1]
WARNING, no entry stored in dbm for [ENSG00000184809.13]
WARNING, no entry stored in dbm for [ENSG00000275826.1]
WARNING, no entry stored in dbm for [ENSG00000204044.6]
WARNING, no entry stored in dbm for [ENSG00000255839.1]
WARNING, no entry stored in dbm for [ENSG00000226903.2]
WARNING, no entry stored in dbm for [ENSG00000188002.10]
WARNING, no entry stored in dbm for [ENSG00000224616.3]
WARNING, no entry stored in dbm for [ENSG00000265018.6]
WARNING, no entry stored in dbm for [ENSG00000230629.2]
WARNING, no entry stored in dbm for [ENSG00000228000.1]
WARNING, no entry stored in dbm for [ENSG00000238015.2]
WARNING, no entry stored in dbm for [ENSG00000263006.6]
WARNING, no entry stored in dbm for [ENSG00000239899.3]
WARNING, no entry stored in dbm for [ENSG00000241175.3]
WARNING, no entry stored in dbm for [ENSG00000244056.3]
WARNING, no entry stored in dbm for [ENSG00000265813.2]
WARNING, no entry stored in dbm for [ENSG00000237361.3]
WARNING, no entry stored in dbm for [ENSG00000244513.7]
WARNING, no entry stored in dbm for [ENSG00000277011.1]
WARNING, no entry stored in dbm for [ENSG00000260930.2]
WARNING, no entry stored in dbm for [ENSG00000273125.2]
WARNING, no entry stored in dbm for [ENSG00000224607.4]
WARNING, no entry stored in dbm for [ENSG00000288581.1]
WARNING, no entry stored in dbm for [ENSG00000240677.1]
WARNING, no entry stored in dbm for [ENSG00000224729.6]
WARNING, no entry stored in dbm for [ENSG00000205361.8]
WARNING, no entry stored in dbm for [ENSG00000233929.1]
WARNING, no entry stored in dbm for [ENSG00000205360.6]
WARNING, no entry stored in dbm for [ENSG00000218283.2]
WARNING, no entry stored in dbm for [ENSG00000225133.1]
WARNING, no entry stored in dbm for [ENSG00000223566.1]
WARNING, no entry stored in dbm for [ENSG00000283805.1]
WARNING, no entry stored in dbm for [ENSG00000197880.9]
WARNING, no entry stored in dbm for [ENSG00000248323.7]
WARNING, no entry stored in dbm for [ENSG00000232527.8]
WARNING, no entry stored in dbm for [ENSG00000272779.1]
WARNING, no entry stored in dbm for [ENSG00000248505.2]
WARNING, no entry stored in dbm for [ENSG00000248489.2]
WARNING, no entry stored in dbm for [ENSG00000236008.3]
WARNING, no entry stored in dbm for [ENSG00000229694.7]
WARNING, no entry stored in dbm for [ENSG00000248231.1]
WARNING, no entry stored in dbm for [ENSG00000235374.2]
WARNING, no entry stored in dbm for [ENSG00000231183.4]
WARNING, no entry stored in dbm for [ENSG00000287008.1]
WARNING, no entry stored in dbm for [ENSG00000281706.3]
WARNING, no entry stored in dbm for [ENSG00000233891.8]
WARNING, no entry stored in dbm for [ENSG00000229657.2]
WARNING, no entry stored in dbm for [ENSG00000255074.1]
WARNING, no entry stored in dbm for [ENSG00000204622.11]
WARNING, no entry stored in dbm for [ENSG00000224557.7]
WARNING, no entry stored in dbm for [ENSG00000261716.2]
WARNING, no entry stored in dbm for [ENSG00000220323.4]
WARNING, no entry stored in dbm for [ENSG00000178243.4]
WARNING, no entry stored in dbm for [ENSG00000281832.1]
WARNING, no entry stored in dbm for [ENSG00000239533.6]
WARNING, no entry stored in dbm for [ENSG00000230590.11]
WARNING, no entry stored in dbm for [ENSG00000213362.3]
WARNING, no entry stored in dbm for [ENSG00000213362.3]
WARNING, no entry stored in dbm for [ENSG00000213468.7]
WARNING, no entry stored in dbm for [ENSG00000185684.15]
WARNING, no entry stored in dbm for [ENSG00000254285.3]
WARNING, no entry stored in dbm for [ENSG00000240416.1]
WARNING, no entry stored in dbm for [ENSG00000229357.1]
WARNING, no entry stored in dbm for [ENSG00000224078.15]
WARNING, no entry stored in dbm for [ENSG00000283541.1]
WARNING, no entry stored in dbm for [ENSG00000234715.2]
WARNING, no entry stored in dbm for [ENSG00000176593.8]
WARNING, no entry stored in dbm for [ENSG00000244712.1]
WARNING, no entry stored in dbm for [ENSG00000215874.3]
WARNING, no entry stored in dbm for [ENSG00000227742.2]
WARNING, no entry stored in dbm for [ENSG00000233145.1]
WARNING, no entry stored in dbm for [ENSG00000226835.3]
WARNING, no entry stored in dbm for [ENSG00000219807.2]
WARNING, no entry stored in dbm for [ENSG00000283285.1]
WARNING, no entry stored in dbm for [ENSG00000230006.7]
WARNING, no entry stored in dbm for [ENSG00000270504.1]
WARNING, no entry stored in dbm for [ENSG00000217801.10]
WARNING, no entry stored in dbm for [ENSG00000235922.1]
WARNING, no entry stored in dbm for [ENSG00000269934.3]
WARNING, no entry stored in dbm for [ENSG00000230490.3]
WARNING, no entry stored in dbm for [ENSG00000230490.3]
WARNING, no entry stored in dbm for [ENSG00000234238.2]
WARNING, no entry stored in dbm for [ENSG00000255085.8]
WARNING, no entry stored in dbm for [ENSG00000226359.1]
WARNING, no entry stored in dbm for [ENSG00000237250.3]
WARNING, no entry stored in dbm for [ENSG00000130600.19]
WARNING, no entry stored in dbm for [ENSG00000254247.1]
WARNING, no entry stored in dbm for [ENSG00000282375.1]
WARNING, no entry stored in dbm for [ENSG00000228999.4]
WARNING, no entry stored in dbm for [ENSG00000240787.1]
WARNING, no entry stored in dbm for [ENSG00000286895.1]
WARNING, no entry stored in dbm for [ENSG00000239268.3]
WARNING, no entry stored in dbm for [ENSG00000253107.1]
WARNING, no entry stored in dbm for [ENSG00000253107.1]
WARNING, no entry stored in dbm for [ENSG00000262580.5]
WARNING, no entry stored in dbm for [ENSG00000279048.1]
WARNING, no entry stored in dbm for [ENSG00000277782.1]
WARNING, no entry stored in dbm for [ENSG00000254741.1]
WARNING, no entry stored in dbm for [ENSG00000251376.1]
WARNING, no entry stored in dbm for [ENSG00000250140.1]
WARNING, no entry stored in dbm for [ENSG00000268093.1]
WARNING, no entry stored in dbm for [ENSG00000270799.1]
WARNING, no entry stored in dbm for [ENSG00000240401.9]
WARNING, no entry stored in dbm for [ENSG00000267723.1]
WARNING, no entry stored in dbm for [ENSG00000280394.1]
WARNING, no entry stored in dbm for [ENSG00000225840.2]
WARNING, no entry stored in dbm for [ENSG00000240661.3]
WARNING, no entry stored in dbm for [ENSG00000259106.1]
WARNING, no entry stored in dbm for [ENSG00000277534.1]
WARNING, no entry stored in dbm for [ENSG00000274712.2]
WARNING, no entry stored in dbm for [ENSG00000273314.1]
WARNING, no entry stored in dbm for [ENSG00000230477.1]
WARNING, no entry stored in dbm for [ENSG00000280054.1]
WARNING, no entry stored in dbm for [ENSG00000259983.1]
WARNING, no entry stored in dbm for [ENSG00000272599.2]
* STAR-Fusion complete. See output: /tmp/nxf.DaP6ZeAZMZ/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)