Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a2/9c436f69c70c8d563c4fd25007b414/aih-tih-sc-28eb14-R1_A23YTGFLT4_1.star_alignment.Aligned.sortedByCoord.out.cram
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0d/be2f5647f2b9dcc88a33d63aa8d3d6/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0d/be2f5647f2b9dcc88a33d63aa8d3d6/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.bai: No such file or directory
ls: *.csi: No such file or directory