#!/bin/bash -euo pipefail
# Extract VAF features from VCF
extract_vaf_features.py \
    "aih-tih-sc-1274d4-R1_A23YTGFLT4_1.vcf" \
    --output "aih-tih-sc-1274d4-R1_A23YTGFLT4_1.features.csv"

cat <<-END_VERSIONS > versions.yml
"NFCORE_RNAFUSION:RNAFUSION:RNA_CONTAMINATION_DETECTION_WORKFLOW:EXTRACT_VAF_FEATURES":
    python: $(python3 --version | sed 's/Python //g')
    extract_vaf_features: 1.0.0
END_VERSIONS