#==================================================
#All numbers are READ count
#==================================================

Total records:                          555751153

QC failed:                              0
Optical/PCR duplicate:                  0
Non primary hits                        48495768
Unmapped reads:                         3416352
mapq < mapq_cut (non-unique):           16724723

mapq >= mapq_cut (unique):              487114310
Read-1:                                 243816450
Read-2:                                 243297860
Reads map to '+':                       243632019
Reads map to '-':                       243482291
Non-splice reads:                       282405613
Splice reads:                           204708697
Reads mapped in proper pairs:           485293882
Proper-paired reads map to different chrom:0