Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e9/684a5836dc34fdee652e1e7cd06043/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/8d/20604090c1a85aa8b4b8a202968199/aih-tih-sc-318819-R1_A23YTGFLT4_1.Aligned.sortedByCoord.out.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e9/684a5836dc34fdee652e1e7cd06043/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.csi: No such file or directory
ls: *.crai: No such file or directory