File Info

Filename
.command.log
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/08/f82e210c60ae715fbbc5db03ec4c73/.command.log
Size
1.1 KB
Attempt
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ab/fedf9fbb257047f30c6821869446db/aih-tih-sc-150e73-R1_A23YTGFLT4_1.sample_qc.tsv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/08/f82e210c60ae715fbbc5db03ec4c73/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/08/f82e210c60ae715fbbc5db03ec4c73/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/40/9e0c94ac39ef194e662e1871bc8587/aih-tih-sc-150e73-R1_A23YTGFLT4_1
==> STAGING COMPLETE (4 inputs)

Processing Kallisto file: aih-tih-sc-150e73-R1_A23YTGFLT4_1/abundance.h5
Successfully converted aih-tih-sc-150e73-R1_A23YTGFLT4_1/abundance.h5 to aih-tih-sc-150e73-R1_A23YTGFLT4_1_kallisto_mqc.tsv
  Sample: aih-tih-sc-150e73-R1_A23YTGFLT4_1
  Mean Fragment Length: 133.8 bp
  Median Fragment Length: 122.0 bp
  pct_mito_est_counts: 0.022%
  pct_ribo_est_counts: 0.888%
  pct_hk_est_counts: 0.477%
  pct_male_est_counts: 0.0%
  pct_mito_tpm: 0.043%
  pct_ribo_tpm: 2.633%
  pct_hk_tpm: 0.715%
  pct_male_tpm: 0.0%
  score_log2tpm1_mean_chry_signature: 3.737%