Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a6/4a7c7d4e85efc225ebabaf5fe2f65c/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a6/4a7c7d4e85efc225ebabaf5fe2f65c/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f3/7190b02d4346e1f3c0b510c5c79ae7/aih-tih-sc-377071-R1_A23YTGFLT4_1_R1.fastq.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f3/7190b02d4346e1f3c0b510c5c79ae7/aih-tih-sc-377071-R1_A23YTGFLT4_1_R2.fastq.gz
==> STAGING COMPLETE (4 inputs)

ls: *.fail.fastq.gz: No such file or directory
ls: *.merged.fastq.gz: No such file or directory